Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_N13
(793 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 114 3e-25
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 114 3e-25
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 114 3e-25
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 114 3e-25
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 114 3e-25
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 114 3e-25
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 114 3e-25
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 114 3e-25
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 114 3e-25
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 114 3e-25
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 114 3e-25
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 114 3e-25
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 111 3e-24
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 110 5e-24
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 32 2.1
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 32 2.1
BC065835-1|AAH65835.1| 526|Homo sapiens Unknown (protein for MG... 31 4.8
AF463523-1|AAN76991.1| 525|Homo sapiens homeodomain leucine zip... 31 4.8
AB037864-1|BAA92681.1| 573|Homo sapiens KIAA1443 protein protein. 31 4.8
AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast can... 31 6.3
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 114 bits (275), Expect = 3e-25
Identities = 58/133 (43%), Positives = 76/133 (57%)
Frame = -1
Query: 793 RXGXGXMXXXCXXQXKGPXXNFQXGXRV*LALSATSPGVEXXXXXXXXXXXLAPGGHLGR 614
R G G M Q +GP + + A PG+ LAPGGH+GR
Sbjct: 190 RAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFR-NIPGITLLNVSKLNILKLAPGGHVGR 248
Query: 613 FVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKR 434
F IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K+
Sbjct: 249 FCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKK 308
Query: 433 VIRATRKLNPLTN 395
+ R K NPL N
Sbjct: 309 IHRRVLKKNPLKN 321
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 114 bits (275), Expect = 3e-25
Identities = 58/133 (43%), Positives = 76/133 (57%)
Frame = -1
Query: 793 RXGXGXMXXXCXXQXKGPXXNFQXGXRV*LALSATSPGVEXXXXXXXXXXXLAPGGHLGR 614
R G G M Q +GP + + A PG+ LAPGGH+GR
Sbjct: 190 RAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFR-NIPGITLLNVSKLNILKLAPGGHVGR 248
Query: 613 FVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKR 434
F IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K+
Sbjct: 249 FCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKK 308
Query: 433 VIRATRKLNPLTN 395
+ R K NPL N
Sbjct: 309 IHRRVLKKNPLKN 321
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 114 bits (275), Expect = 3e-25
Identities = 58/133 (43%), Positives = 76/133 (57%)
Frame = -1
Query: 793 RXGXGXMXXXCXXQXKGPXXNFQXGXRV*LALSATSPGVEXXXXXXXXXXXLAPGGHLGR 614
R G G M Q +GP + + A PG+ LAPGGH+GR
Sbjct: 190 RAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFR-NIPGITLLNVSKLNILKLAPGGHVGR 248
Query: 613 FVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKR 434
F IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K+
Sbjct: 249 FCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKK 308
Query: 433 VIRATRKLNPLTN 395
+ R K NPL N
Sbjct: 309 IHRRVLKKNPLKN 321
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 114 bits (275), Expect = 3e-25
Identities = 58/133 (43%), Positives = 76/133 (57%)
Frame = -1
Query: 793 RXGXGXMXXXCXXQXKGPXXNFQXGXRV*LALSATSPGVEXXXXXXXXXXXLAPGGHLGR 614
R G G M Q +GP + + A PG+ LAPGGH+GR
Sbjct: 190 RAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFR-NIPGITLLNVSKLNILKLAPGGHVGR 248
Query: 613 FVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKR 434
F IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K+
Sbjct: 249 FCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKK 308
Query: 433 VIRATRKLNPLTN 395
+ R K NPL N
Sbjct: 309 IHRRVLKKNPLKN 321
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 114 bits (275), Expect = 3e-25
Identities = 58/133 (43%), Positives = 76/133 (57%)
Frame = -1
Query: 793 RXGXGXMXXXCXXQXKGPXXNFQXGXRV*LALSATSPGVEXXXXXXXXXXXLAPGGHLGR 614
R G G M Q +GP + + A PG+ LAPGGH+GR
Sbjct: 190 RAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFR-NIPGITLLNVSKLNILKLAPGGHVGR 248
Query: 613 FVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKR 434
F IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K+
Sbjct: 249 FCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKK 308
Query: 433 VIRATRKLNPLTN 395
+ R K NPL N
Sbjct: 309 IHRRVLKKNPLKN 321
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 114 bits (275), Expect = 3e-25
Identities = 58/133 (43%), Positives = 76/133 (57%)
Frame = -1
Query: 793 RXGXGXMXXXCXXQXKGPXXNFQXGXRV*LALSATSPGVEXXXXXXXXXXXLAPGGHLGR 614
R G G M Q +GP + + A PG+ LAPGGH+GR
Sbjct: 190 RAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFR-NIPGITLLNVSKLNILKLAPGGHVGR 248
Query: 613 FVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKR 434
F IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K+
Sbjct: 249 FCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKK 308
Query: 433 VIRATRKLNPLTN 395
+ R K NPL N
Sbjct: 309 IHRRVLKKNPLKN 321
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 114 bits (275), Expect = 3e-25
Identities = 58/133 (43%), Positives = 76/133 (57%)
Frame = -1
Query: 793 RXGXGXMXXXCXXQXKGPXXNFQXGXRV*LALSATSPGVEXXXXXXXXXXXLAPGGHLGR 614
R G G M Q +GP + + A PG+ LAPGGH+GR
Sbjct: 190 RAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFR-NIPGITLLNVSKLNILKLAPGGHVGR 248
Query: 613 FVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKR 434
F IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K+
Sbjct: 249 FCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKK 308
Query: 433 VIRATRKLNPLTN 395
+ R K NPL N
Sbjct: 309 IHRRVLKKNPLKN 321
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 114 bits (275), Expect = 3e-25
Identities = 58/133 (43%), Positives = 76/133 (57%)
Frame = -1
Query: 793 RXGXGXMXXXCXXQXKGPXXNFQXGXRV*LALSATSPGVEXXXXXXXXXXXLAPGGHLGR 614
R G G M Q +GP + + A PG+ LAPGGH+GR
Sbjct: 190 RAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFR-NIPGITLLNVSKLNILKLAPGGHVGR 248
Query: 613 FVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKR 434
F IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K+
Sbjct: 249 FCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKK 308
Query: 433 VIRATRKLNPLTN 395
+ R K NPL N
Sbjct: 309 IHRRVLKKNPLKN 321
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 114 bits (275), Expect = 3e-25
Identities = 58/133 (43%), Positives = 76/133 (57%)
Frame = -1
Query: 793 RXGXGXMXXXCXXQXKGPXXNFQXGXRV*LALSATSPGVEXXXXXXXXXXXLAPGGHLGR 614
R G G M Q +GP + + A PG+ LAPGGH+GR
Sbjct: 190 RAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFR-NIPGITLLNVSKLNILKLAPGGHVGR 248
Query: 613 FVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKR 434
F IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K+
Sbjct: 249 FCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKK 308
Query: 433 VIRATRKLNPLTN 395
+ R K NPL N
Sbjct: 309 IHRRVLKKNPLKN 321
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 114 bits (275), Expect = 3e-25
Identities = 58/133 (43%), Positives = 76/133 (57%)
Frame = -1
Query: 793 RXGXGXMXXXCXXQXKGPXXNFQXGXRV*LALSATSPGVEXXXXXXXXXXXLAPGGHLGR 614
R G G M Q +GP + + A PG+ LAPGGH+GR
Sbjct: 190 RAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFR-NIPGITLLNVSKLNILKLAPGGHVGR 248
Query: 613 FVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKR 434
F IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K+
Sbjct: 249 FCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKK 308
Query: 433 VIRATRKLNPLTN 395
+ R K NPL N
Sbjct: 309 IHRRVLKKNPLKN 321
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 114 bits (275), Expect = 3e-25
Identities = 58/133 (43%), Positives = 76/133 (57%)
Frame = -1
Query: 793 RXGXGXMXXXCXXQXKGPXXNFQXGXRV*LALSATSPGVEXXXXXXXXXXXLAPGGHLGR 614
R G G M Q +GP + + A PG+ LAPGGH+GR
Sbjct: 204 RAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFR-NIPGITLLNVSKLNILKLAPGGHVGR 262
Query: 613 FVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKR 434
F IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K+
Sbjct: 263 FCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKK 322
Query: 433 VIRATRKLNPLTN 395
+ R K NPL N
Sbjct: 323 IHRRVLKKNPLKN 335
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 114 bits (275), Expect = 3e-25
Identities = 58/133 (43%), Positives = 76/133 (57%)
Frame = -1
Query: 793 RXGXGXMXXXCXXQXKGPXXNFQXGXRV*LALSATSPGVEXXXXXXXXXXXLAPGGHLGR 614
R G G M Q +GP + + A PG+ LAPGGH+GR
Sbjct: 190 RAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFR-NIPGITLLNVSKLNILKLAPGGHVGR 248
Query: 613 FVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKR 434
F IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K+
Sbjct: 249 FCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKK 308
Query: 433 VIRATRKLNPLTN 395
+ R K NPL N
Sbjct: 309 IHRRVLKKNPLKN 321
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 111 bits (267), Expect = 3e-24
Identities = 58/133 (43%), Positives = 76/133 (57%)
Frame = -1
Query: 793 RXGXGXMXXXCXXQXKGPXXNFQXGXRV*LALSATSPGVEXXXXXXXXXXXLAPGGHLGR 614
R G G M Q +GP + + A PG+ LAPGGH+GR
Sbjct: 190 RAGKGKMRNR-RIQRRGPCIIYNEDNGIIKAFR-NIPGITLLNVSKLNILKLAPGGHVGR 247
Query: 613 FVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKR 434
F IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K+
Sbjct: 248 FCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKK 307
Query: 433 VIRATRKLNPLTN 395
+ R K NPL N
Sbjct: 308 IHRRVLKKNPLKN 320
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 110 bits (265), Expect = 5e-24
Identities = 56/133 (42%), Positives = 75/133 (56%)
Frame = -1
Query: 793 RXGXGXMXXXCXXQXKGPXXNFQXGXRV*LALSATSPGVEXXXXXXXXXXXLAPGGHLGR 614
R G G M Q +GP + + A PG+ LAPGGH+GR
Sbjct: 190 RAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFR-NIPGITLLNVSKLNILKLAPGGHVGR 248
Query: 613 FVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKR 434
F IW +SAF +LD L+G+W+ + K N+NLP +M NTDL+R+LKS EI++ LRAP K+
Sbjct: 249 FCIWIESAFRKLDELYGTWRKAASLKSNYNLPMHEMINTDLSRILKSPEIQRALRAPRKK 308
Query: 433 VIRATRKLNPLTN 395
+ R K NPL N
Sbjct: 309 IHRRVLKKNPLKN 321
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 32.3 bits (70), Expect = 2.1
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = -1
Query: 577 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP-NKRV-IRATRKLNP 404
DPL P ++K + L + ++AN + RL+KSD+++ +P N V I ++
Sbjct: 26 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSPANSDVEIDGIGRIAM 85
Query: 403 LTNNQGDAETQSLRGR 356
+T DAE++ + R
Sbjct: 86 VTKQVTDAESKLKKHR 101
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 32.3 bits (70), Expect = 2.1
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = -1
Query: 577 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP-NKRV-IRATRKLNP 404
DPL P ++K + L + ++AN + RL+KSD+++ +P N V I ++
Sbjct: 771 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSPANSDVEIDGIGRIAM 830
Query: 403 LTNNQGDAETQSLRGR 356
+T DAE++ + R
Sbjct: 831 VTKQVTDAESKLKKHR 846
>BC065835-1|AAH65835.1| 526|Homo sapiens Unknown (protein for
MGC:75505) protein.
Length = 526
Score = 31.1 bits (67), Expect = 4.8
Identities = 29/106 (27%), Positives = 41/106 (38%), Gaps = 3/106 (2%)
Frame = -2
Query: 615 VSSSGLSPHSAGLTPYSGHGRHHQNKRRTSTCPN---RRWPTLTSHVFSSLMRSGRSSVL 445
+ SSGLS AG P HG + ++T P R P + + SS SSV
Sbjct: 199 LQSSGLSKEQAGRGPNQSHGIGTASWNHSTTVPQPQARDKPPPIALIASSCKEESASSVT 258
Query: 444 PTNA*SVLHAN*TRSLTTKAMLKLNPYAAVXEEESYLRAAQKEELE 307
P+++ + + T A L P V + S A LE
Sbjct: 259 PSSSSTSSSFQVLANGATAASKPLQPLGCVPQSVSPSEQALPPHLE 304
>AF463523-1|AAN76991.1| 525|Homo sapiens homeodomain leucine zipper
protein protein.
Length = 525
Score = 31.1 bits (67), Expect = 4.8
Identities = 29/106 (27%), Positives = 41/106 (38%), Gaps = 3/106 (2%)
Frame = -2
Query: 615 VSSSGLSPHSAGLTPYSGHGRHHQNKRRTSTCPN---RRWPTLTSHVFSSLMRSGRSSVL 445
+ SSGLS AG P HG + ++T P R P + + SS SSV
Sbjct: 199 LQSSGLSKEQAGRGPNQSHGIGTASWNHSTTVPQPQARDKPPPIALIASSCKEESASSVT 258
Query: 444 PTNA*SVLHAN*TRSLTTKAMLKLNPYAAVXEEESYLRAAQKEELE 307
P+++ + + T A L P V + S A LE
Sbjct: 259 PSSSSTSSSFQVLANGATAASKPLQPLGCVPQSVSPSEQALPPHLE 304
>AB037864-1|BAA92681.1| 573|Homo sapiens KIAA1443 protein protein.
Length = 573
Score = 31.1 bits (67), Expect = 4.8
Identities = 29/106 (27%), Positives = 41/106 (38%), Gaps = 3/106 (2%)
Frame = -2
Query: 615 VSSSGLSPHSAGLTPYSGHGRHHQNKRRTSTCPN---RRWPTLTSHVFSSLMRSGRSSVL 445
+ SSGLS AG P HG + ++T P R P + + SS SSV
Sbjct: 247 LQSSGLSKEQAGRGPNQSHGIGTASWNHSTTVPQPQARDKPPPIALIASSCKEESASSVT 306
Query: 444 PTNA*SVLHAN*TRSLTTKAMLKLNPYAAVXEEESYLRAAQKEELE 307
P+++ + + T A L P V + S A LE
Sbjct: 307 PSSSSTSSSFQVLANGATAASKPLQPLGCVPQSVSPSEQALPPHLE 352
>AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast cancer
1 protein.
Length = 1013
Score = 30.7 bits (66), Expect = 6.3
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -2
Query: 600 LSPHSAGLTPYSGHGRHHQNKRRTSTCPNRRWPTLTSHVFSSLMRSG 460
+ PH A L G G Q K ++T P++R P L +F ++M +G
Sbjct: 560 IQPHGAKLLEELGTGLIQQYKPDSTTAPDQRAPVLLVVMFWTMMLNG 606
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,591,979
Number of Sequences: 237096
Number of extensions: 1590148
Number of successful extensions: 3326
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3326
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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