Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_N10
(791 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 117 2e-27
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 117 2e-27
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 93 5e-20
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 78 1e-15
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 35 0.015
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 29 0.58
SPCC61.05 |||S. pombe specific multicopy membrane protein family... 27 3.1
SPAC227.18 |lys3|SPAC2F7.01|saccharopine dehydrogenase [NAD+, L-... 26 5.4
SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein |Schizo... 26 7.1
SPAC3C7.09 |set8||lysine methyltransferase Set8 |Schizosaccharom... 25 9.4
SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual 25 9.4
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 117 bits (282), Expect = 2e-27
Identities = 55/124 (44%), Positives = 75/124 (60%)
Frame = -1
Query: 551 LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 372
L SP++ V+ V E A+GGIY VLN++RGHVF E Q GTP++ +KAYLPVNESF
Sbjct: 719 LASPIIQEPVFLVEIQVSENAMGGIYSVLNKKRGHVFSEEQRVGTPLYNIKAYLPVNESF 778
Query: 371 GFTADLRSNTGGQAFPQCVFDHWQVLPWRPVRTSEQALQRCTGNEKEERIEGRSPRLNSI 192
GFT +LR T GQAFPQ VFDHW + P+ + + Q K + ++ P
Sbjct: 779 GFTGELRQATAGQAFPQLVFDHWSPMSGDPLDPTSKPGQIVCEARKRKGLKENVPDYTEY 838
Query: 191 FGQI 180
+ ++
Sbjct: 839 YDRL 842
Score = 103 bits (247), Expect = 3e-23
Identities = 49/77 (63%), Positives = 55/77 (71%)
Frame = -3
Query: 714 AGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRL 535
A F WA+KEG M EENLR RFNI DV LH DAIHRGGGQIIPT RR +YA L A P +
Sbjct: 665 AAFAWASKEGPMFEENLRSCRFNILDVVLHADAIHRGGGQIIPTARRVVYASTLLASPII 724
Query: 534 MEPVYLCEIQCP*SSCG 484
EPV+L EIQ ++ G
Sbjct: 725 QEPVFLVEIQVSENAMG 741
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 117 bits (282), Expect = 2e-27
Identities = 55/124 (44%), Positives = 75/124 (60%)
Frame = -1
Query: 551 LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 372
L SP++ V+ V E A+GGIY VLN++RGHVF E Q GTP++ +KAYLPVNESF
Sbjct: 719 LASPIIQEPVFLVEIQVSENAMGGIYSVLNKKRGHVFSEEQRVGTPLYNIKAYLPVNESF 778
Query: 371 GFTADLRSNTGGQAFPQCVFDHWQVLPWRPVRTSEQALQRCTGNEKEERIEGRSPRLNSI 192
GFT +LR T GQAFPQ VFDHW + P+ + + Q K + ++ P
Sbjct: 779 GFTGELRQATAGQAFPQLVFDHWSPMSGDPLDPTSKPGQIVCEARKRKGLKENVPDYTEY 838
Query: 191 FGQI 180
+ ++
Sbjct: 839 YDRL 842
Score = 103 bits (247), Expect = 3e-23
Identities = 49/77 (63%), Positives = 55/77 (71%)
Frame = -3
Query: 714 AGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRL 535
A F WA+KEG M EENLR RFNI DV LH DAIHRGGGQIIPT RR +YA L A P +
Sbjct: 665 AAFAWASKEGPMFEENLRSCRFNILDVVLHADAIHRGGGQIIPTARRVVYASTLLASPII 724
Query: 534 MEPVYLCEIQCP*SSCG 484
EPV+L EIQ ++ G
Sbjct: 725 QEPVFLVEIQVSENAMG 741
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 92.7 bits (220), Expect = 5e-20
Identities = 39/71 (54%), Positives = 49/71 (69%)
Frame = -3
Query: 711 GFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLM 532
GFQW +EG + +E +R V F + DV L + I+RGGGQIIPT RR Y+ LTA PRLM
Sbjct: 782 GFQWGTREGPLCDETIRNVNFRLMDVVLAPEQIYRGGGQIIPTARRVCYSSFLTASPRLM 841
Query: 531 EPVYLCEIQCP 499
EPVY+ E+ P
Sbjct: 842 EPVYMVEVHAP 852
Score = 83.8 bits (198), Expect = 3e-17
Identities = 41/92 (44%), Positives = 57/92 (61%)
Frame = -1
Query: 545 SPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGF 366
SP L V+ P ++ IY +L RRRGHV ++ G+P+++V+A +PV +S GF
Sbjct: 837 SPRLMEPVYMVEVHAPADSLPIIYDLLTRRRGHVLQDIPRPGSPLYLVRALIPVIDSCGF 896
Query: 365 TADLRSNTGGQAFPQCVFDHWQVLPWRPVRTS 270
DLR +T GQA Q VFDHWQV+P P+ S
Sbjct: 897 ETDLRVHTQGQAMCQMVFDHWQVVPGDPLDKS 928
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1000
Score = 78.2 bits (184), Expect = 1e-15
Identities = 36/80 (45%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Frame = -1
Query: 488 VGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFD 309
+G +YGV+++RRG V +E GTP FIVKA +PV ESFGF ++ T G A+PQ +F
Sbjct: 878 LGRVYGVVSKRRGRVIDEEMKEGTPFFIVKALIPVVESFGFAVEILKRTSGAAYPQLIFH 937
Query: 308 HWQVLPWRP--VRTSEQALQ 255
+++L P V T+E+ L+
Sbjct: 938 GFEMLDENPFWVPTTEEELE 957
Score = 25.8 bits (54), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -3
Query: 600 GQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQ 505
GQ+I + + L PRLM +Y C++Q
Sbjct: 841 GQVISVVKESIRHGFLGWSPRLMLAMYSCDVQ 872
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 34.7 bits (76), Expect = 0.015
Identities = 17/71 (23%), Positives = 38/71 (53%)
Frame = -1
Query: 545 SPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGF 366
+P++ + V + P GG+ G L++R+ + + F ++A +P+N F +
Sbjct: 671 NPMVLEPIMNVSITAPVEHQGGVIGNLDKRKATIVDSD--TDEDEFTLQAEVPLNSMFSY 728
Query: 365 TADLRSNTGGQ 333
++D+R+ T G+
Sbjct: 729 SSDIRALTKGK 739
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 29.5 bits (63), Expect = 0.58
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +1
Query: 241 FPVQRCRACSEVRTGLQGRTCQWSNTHCGKACPPVLERKSAVKPNDS 381
+ + RC C E G C + C K C P + K K +DS
Sbjct: 414 YQIMRCALCGEFLKNAAGMQCIDCHYTCHKKCYPKVVTKCISKSSDS 460
>SPCC61.05 |||S. pombe specific multicopy membrane protein family
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 469
Score = 27.1 bits (57), Expect = 3.1
Identities = 19/73 (26%), Positives = 31/73 (42%)
Frame = -1
Query: 551 LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 372
+L ++W++Y FV + +P AV +Y R FE +I A + V+
Sbjct: 338 ILLKLIWNIYTFVYYGLPFFAVYRLYKQAGESRKLGFEAKYSLLRTCYIALAAVTVSNCL 397
Query: 371 GFTADLRSNTGGQ 333
F +R G Q
Sbjct: 398 -FLGVVRPLLGSQ 409
>SPAC227.18 |lys3|SPAC2F7.01|saccharopine dehydrogenase [NAD+,
L-lysine forming] |Schizosaccharomyces pombe|chr
1|||Manual
Length = 368
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 581 VVGMIWPPPLWMASVWSVTS*MLNLTPRKFSSAITPSLAA 700
V G+ PPPL + S+ + + + + FS A+ PSL A
Sbjct: 305 VKGVTTPPPLEVISIDHLPTLLPRESSEAFSEALIPSLLA 344
>SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 391
Score = 25.8 bits (54), Expect = 7.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 583 CWNDLATTSMDGISMECYIIDVESNTTQI 669
CW++L+TTS + + II + TT I
Sbjct: 211 CWDELSTTSPESSKVSEPIIQDNTQTTHI 239
>SPAC3C7.09 |set8||lysine methyltransferase Set8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 429
Score = 25.4 bits (53), Expect = 9.4
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 367 LLPICVPTPADRPSRSAYSTIGRSXPGDPC 278
+LP+ + TPA P + YS G S C
Sbjct: 109 VLPLSINTPAQWPEKEVYSLQGTSIFNPVC 138
>SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual
Length = 935
Score = 25.4 bits (53), Expect = 9.4
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = -1
Query: 551 LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHV 444
+ +PV + VP +A+ +G++N+R G +
Sbjct: 828 VFNPVTQGALLMYTILVPFIALSAAFGIMNKRLGGI 863
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,267,997
Number of Sequences: 5004
Number of extensions: 70106
Number of successful extensions: 160
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 385381248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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