Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_N08
(825 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50109-8|CAA90435.1| 479|Caenorhabditis elegans Hypothetical pr... 246 1e-65
U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical pr... 30 1.7
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 30 1.7
AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical... 29 4.0
AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical... 29 4.0
AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical ... 29 4.0
AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical... 29 4.0
AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical... 29 4.0
AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical ... 29 4.0
Z70752-3|CAA94755.3| 654|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z66497-8|CAA91285.2| 433|Caenorhabditis elegans Hypothetical pr... 28 7.1
AJ745071-1|CAG32977.1| 433|Caenorhabditis elegans core alpha1,3... 28 7.1
U00035-6|AAA50647.1| 315|Caenorhabditis elegans Hypothetical pr... 28 9.3
AM231686-1|CAJ77755.1| 315|Caenorhabditis elegans GDP-4-keto-6-... 28 9.3
>Z50109-8|CAA90435.1| 479|Caenorhabditis elegans Hypothetical
protein C09H10.3 protein.
Length = 479
Score = 246 bits (603), Expect = 1e-65
Identities = 115/170 (67%), Positives = 132/170 (77%)
Frame = -2
Query: 692 PCTVEEEMSIPLQGAHWEARGRSHPAAXXXXXXXXXXXXXXPLIPRNVCETVLMDFDGLV 513
PCTVEEEMS+PL+ E PL+P+NVC+TVLMDFD LV
Sbjct: 296 PCTVEEEMSVPLKDLI-ERHCGGVIGGWDNLLAIIPGGSSVPLMPKNVCDTVLMDFDALV 354
Query: 512 AAQTSLGTAAIIVMDKSTDIVKAIARLIMFYKHESCGQCTPCREGVSWMNKIIYRFVDGN 333
AAQ+ LGTAA+IVM+K TDIVK IARL +FYKHESCGQCTPCREG +W+NK+++RFVDG
Sbjct: 355 AAQSGLGTAAVIVMNKQTDIVKCIARLSLFYKHESCGQCTPCREGCNWLNKMMWRFVDGK 414
Query: 332 ASPKEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELERRMQEY 183
A P EIDM+WE+SKQIEGHTICALGD AAWPVQGLIRHFRPELERRM E+
Sbjct: 415 AKPSEIDMMWELSKQIEGHTICALGDAAAWPVQGLIRHFRPELERRMAEF 464
Score = 34.7 bits (76), Expect = 0.081
Identities = 27/65 (41%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = -1
Query: 774 GGKGSHRSGAKRXSGTKLFNISGHVN---TAVHRGGGDEHPAXRSSLGGTRAESPGGWDN 604
GG G +R GTKLF ISG VN T GG GGWDN
Sbjct: 269 GGDWFASFGRERNRGTKLFCISGQVNNPCTVEEEMSVPLKDLIERHCGGV----IGGWDN 324
Query: 603 LLAII 589
LLAII
Sbjct: 325 LLAII 329
>U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical
protein T13H2.5b protein.
Length = 1092
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 140 TSTGARLCSARARPSTPACVARARAGSD 223
T +R CS+ RPS+P+ V R R GSD
Sbjct: 19 TRRPSRPCSSYDRPSSPSVVIRERLGSD 46
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 140 TSTGARLCSARARPSTPACVARARAGSD 223
T +R CS+ RPS+P+ V R R GSD
Sbjct: 1398 TRRPSRPCSSYDRPSSPSVVIRERLGSD 1425
>AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6c protein.
Length = 1245
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 195 ASLELGPEVTYESLHRPRGSVAQSADRVPFDLFRNFPQHVDF 320
A + L P E LH+ +G + + + + DL R+ P+H F
Sbjct: 507 AEMALNPGYYRELLHKNQGVYSVALEEIERDLHRSLPEHPAF 548
>AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical
protein Y45F10A.6a protein.
Length = 1247
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 195 ASLELGPEVTYESLHRPRGSVAQSADRVPFDLFRNFPQHVDF 320
A + L P E LH+ +G + + + + DL R+ P+H F
Sbjct: 507 AEMALNPGYYRELLHKNQGVYSVALEEIERDLHRSLPEHPAF 548
>AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6b protein.
Length = 1245
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 195 ASLELGPEVTYESLHRPRGSVAQSADRVPFDLFRNFPQHVDF 320
A + L P E LH+ +G + + + + DL R+ P+H F
Sbjct: 507 AEMALNPGYYRELLHKNQGVYSVALEEIERDLHRSLPEHPAF 548
>AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6c protein.
Length = 1245
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 195 ASLELGPEVTYESLHRPRGSVAQSADRVPFDLFRNFPQHVDF 320
A + L P E LH+ +G + + + + DL R+ P+H F
Sbjct: 507 AEMALNPGYYRELLHKNQGVYSVALEEIERDLHRSLPEHPAF 548
>AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical
protein Y45F10A.6a protein.
Length = 1247
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 195 ASLELGPEVTYESLHRPRGSVAQSADRVPFDLFRNFPQHVDF 320
A + L P E LH+ +G + + + + DL R+ P+H F
Sbjct: 507 AEMALNPGYYRELLHKNQGVYSVALEEIERDLHRSLPEHPAF 548
>AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6b protein.
Length = 1245
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 195 ASLELGPEVTYESLHRPRGSVAQSADRVPFDLFRNFPQHVDF 320
A + L P E LH+ +G + + + + DL R+ P+H F
Sbjct: 507 AEMALNPGYYRELLHKNQGVYSVALEEIERDLHRSLPEHPAF 548
>Z70752-3|CAA94755.3| 654|Caenorhabditis elegans Hypothetical
protein F25B3.3 protein.
Length = 654
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = -3
Query: 319 KSTCCGKFRNKSKG--TRSALWATEPRGRCRDSYVTSGPSSSDACRSTRPRTGRAKPSAC 146
KS + R KS TR+A W PRG R + + RS+RPRT A ++
Sbjct: 535 KSNAVAECRRKSSSNLTRAAEWFASPRGSMRSRIINT------CKRSSRPRTVSAVVTSP 588
Query: 145 TS 140
T+
Sbjct: 589 TT 590
>Z66497-8|CAA91285.2| 433|Caenorhabditis elegans Hypothetical
protein K08F8.3 protein.
Length = 433
Score = 28.3 bits (60), Expect = 7.1
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 334 LPSTNLYIILFIQETPSRQGVHWPQ 408
+P N Y++ F QE+P+ G+ P+
Sbjct: 165 VPKPNQYVVYFSQESPANSGIQIPR 189
>AJ745071-1|CAG32977.1| 433|Caenorhabditis elegans core
alpha1,3-fucosyltransferase protein.
Length = 433
Score = 28.3 bits (60), Expect = 7.1
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 334 LPSTNLYIILFIQETPSRQGVHWPQ 408
+P N Y++ F QE+P+ G+ P+
Sbjct: 165 VPKPNQYVVYFSQESPANSGIQIPR 189
>U00035-6|AAA50647.1| 315|Caenorhabditis elegans Hypothetical
protein R01H2.5 protein.
Length = 315
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 288 LFRNFPQHVDFFR*SITIDESVYNLVHPGDTFAARSALA 404
LF N ++ FFR ++ I+++V L H D S L+
Sbjct: 70 LFHNLAHNLQFFRKNMAINDNVLALCHEFDVIKCVSCLS 108
>AM231686-1|CAJ77755.1| 315|Caenorhabditis elegans
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4- reductase
protein.
Length = 315
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 288 LFRNFPQHVDFFR*SITIDESVYNLVHPGDTFAARSALA 404
LF N ++ FFR ++ I+++V L H D S L+
Sbjct: 70 LFHNLAHNLQFFRKNMAINDNVLALCHEFDVIKCVSCLS 108
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,152,840
Number of Sequences: 27780
Number of extensions: 401817
Number of successful extensions: 1399
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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