Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_N07
(824 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 345 6e-96
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 344 1e-95
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 144 1e-35
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 79 8e-16
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 33 0.065
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.26
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 0.35
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 30 0.46
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 29 1.1
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.4
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 26 5.6
SPAP27G11.09c |||GTP cyclohydrolase |Schizosaccharomyces pombe|c... 26 5.6
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.6
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 26 7.5
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 26 7.5
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 25 9.9
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz... 25 9.9
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 345 bits (847), Expect = 6e-96
Identities = 152/189 (80%), Positives = 170/189 (89%)
Frame = -1
Query: 698 DLTEFQTNLVPYPRIHFPLVTYAPVISAEKACHEQLSVAEITNACFEPANQMVKCDPRHG 519
DL EFQTNLVPYPRIHFPLVTY+P++SA KA HE SV EITN CFEP NQMVKCDPR G
Sbjct: 255 DLNEFQTNLVPYPRIHFPLVTYSPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRTG 314
Query: 518 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAK 339
+YMA C+LYRGDV+P+DV AA+ +IK++RTIQFVDWCPTGFK+GI Y+PP VPG +AK
Sbjct: 315 RYMATCLLYRGDVIPRDVQAAVTSIKSRRTIQFVDWCPTGFKIGICYEPPQHVPGSGIAK 374
Query: 338 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 159
V RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+
Sbjct: 375 VNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALER 434
Query: 158 DYEEVGMDS 132
DYEEVG DS
Sbjct: 435 DYEEVGQDS 443
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 344 bits (845), Expect = 1e-95
Identities = 154/196 (78%), Positives = 171/196 (87%)
Frame = -1
Query: 719 FECASECDLTEFQTNLVPYPRIHFPLVTYAPVISAEKACHEQLSVAEITNACFEPANQMV 540
FE + DL EFQTNLVPYPRIHFPLVTYAP++SA KA HE SV EITN CFEP NQMV
Sbjct: 244 FEGSLNVDLAEFQTNLVPYPRIHFPLVTYAPIVSAAKAFHESNSVQEITNQCFEPYNQMV 303
Query: 539 KCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 360
KCDPR G+YMA C+LYRGDV+P+DV AA+ TIK KRTIQFVDWCPTGFK+GI +PP +
Sbjct: 304 KCDPRAGRYMATCLLYRGDVIPRDVQAAVTTIKAKRTIQFVDWCPTGFKIGICDRPPQHI 363
Query: 359 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 180
G ++AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEARE
Sbjct: 364 EGSEIAKVDRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEARE 423
Query: 179 DLAALEKDYEEVGMDS 132
DLAALE+DYEEVG DS
Sbjct: 424 DLAALERDYEEVGQDS 439
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 144 bits (350), Expect = 1e-35
Identities = 71/191 (37%), Positives = 112/191 (58%), Gaps = 3/191 (1%)
Frame = -1
Query: 698 DLTEFQTNLVPYPRIHFPLVTYAPVISAEKACHEQLSVAEITNACFEPANQMVKCDPRHG 519
DL + N+VP+PR+HF +V +AP+ + + + +SV E+T F+ N MV DPRHG
Sbjct: 249 DLRKLAVNMVPFPRLHFFMVGFAPLAAIGSSSFQAVSVPELTQQMFDANNMMVAADPRHG 308
Query: 518 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAK 339
+Y+ L+RG V K+V+ I +++TK + FV+W P + PP DL
Sbjct: 309 RYLTVAALFRGKVSMKEVDEQIRSVQTKNSAYFVEWIPDNVLKAVCSVPPK-----DL-- 361
Query: 338 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR---EDLAA 168
+ + + N+T+I E + RL +F M+ ++AF+HWY GEGM+E EF+EA DL +
Sbjct: 362 -KMSATFIGNSTSIQEIFRRLGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 167 LEKDYEEVGMD 135
+ Y+E G+D
Sbjct: 421 EYQQYQEAGID 431
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 79.0 bits (186), Expect = 8e-16
Identities = 50/190 (26%), Positives = 93/190 (48%), Gaps = 7/190 (3%)
Frame = -1
Query: 698 DLTEFQTNLVPYPRIHFPLVTYAPVISA---EKACHEQLSVAEITNACFEPANQMVKCDP 528
DL +L+P PR HF L +Y P + E + +V ++ P NQMV +P
Sbjct: 252 DLVSIIASLIPSPRCHFLLTSYTPFTNQQVEEAKAIRKTTVLDVMRRLLLPKNQMVSVNP 311
Query: 527 -RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 351
+ +++ + +G+ P DV+ ++ I+ +R F+ W P +V ++ + P +
Sbjct: 312 SKKSCFISILDIIQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALSKKSPYIKTNH 371
Query: 350 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE---GEFSEARE 180
++ + ML+N T+IA + R ++D + + AF+ Y E + E EF +R+
Sbjct: 372 RVSGL-----MLANHTSIASLFKRTLDQYDRLRKRNAFLEQYKKEAIFEDDLNEFDSSRD 426
Query: 179 DLAALEKDYE 150
+A L +YE
Sbjct: 427 VVADLINEYE 436
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 32.7 bits (71), Expect = 0.065
Identities = 25/89 (28%), Positives = 34/89 (38%)
Frame = -2
Query: 622 SLPRRPAMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPS 443
S+P+ PA P S + P P + S VV P + RP++P
Sbjct: 513 SVPQPPAAPVVPEAPSVHQPPAAPV-----APEVPSAPQRPAAPVVPEAPSVPQRPAVPV 567
Query: 442 KPSVLSNSSTGVQPVSRSVSTTSHPPWCP 356
P LS V PV+ V + PP P
Sbjct: 568 VPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
Score = 27.1 bits (57), Expect = 3.2
Identities = 24/90 (26%), Positives = 32/90 (35%)
Frame = -2
Query: 622 SLPRRPAMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPS 443
S+P+RPA+ P S P P + +A S P+ P P
Sbjct: 558 SVPQRPAVPVVPEALSVPQPPVAPVA--PEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPE 615
Query: 442 KPSVLSNSSTGVQPVSRSVSTTSHPPWCPE 353
PSV + V P + SV P PE
Sbjct: 616 VPSVPQRPAVPVVPEAPSVPQPPAAPVVPE 645
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 30.7 bits (66), Expect = 0.26
Identities = 24/81 (29%), Positives = 42/81 (51%)
Frame = -2
Query: 655 STSHWSRTRQSSLPRRPAMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSY 476
STS + T SS RPA +S S +H SS ++ ++ PV ++ + + +S+
Sbjct: 377 STSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSSKS-SSAPVSSAFYHNSTSSRSSSH 435
Query: 475 PRM*TRPSLPSKPSVLSNSST 413
+ SL SKP + ++SS+
Sbjct: 436 SSSHSLSSLSSKPILTASSSS 456
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 30.3 bits (65), Expect = 0.35
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 2/112 (1%)
Frame = -2
Query: 697 TSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPAM--NSFPSPRSQTHASSPPTRW*NATPV 524
TS S L+ + +++ T S+ P P + S +P + T+ ++ + +TPV
Sbjct: 381 TSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPV 440
Query: 523 MASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHP 368
++ CT TS P T + S P +N +T S TS P
Sbjct: 441 TSTPLATTNCTTSTSVPY--TSTPVTSTPLTTTNCTTSTSIPYTSTPVTSTP 490
Score = 29.5 bits (63), Expect = 0.61
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
Frame = -2
Query: 700 VTSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPAMNSFPS-PRSQTHASSPPTRW*NATPV 524
VTS T C T S + S SS + S P + T+ ++ + +TPV
Sbjct: 486 VTSTPLTTTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVLYTSTPV 545
Query: 523 MASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 374
++ CT TS P T P S ++ S++ PV+ + TTS
Sbjct: 546 TSTPLATTNCTTSTSVPYTST-PVTSSNYTISSSTPVTSTPVTTTNCTTS 594
Score = 27.1 bits (57), Expect = 3.2
Identities = 25/107 (23%), Positives = 45/107 (42%)
Frame = -2
Query: 694 SPSSRLTWCLTPVSTSHWSRTRQSSLPRRPAMNSFPSPRSQTHASSPPTRW*NATPVMAS 515
+P+ T TP++T++ + + P ++ + + T ++S P +TPV ++
Sbjct: 410 TPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPY---TSTPVTST 466
Query: 514 TWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 374
CT TS P T + S P +N +T S TS
Sbjct: 467 PLTTTNCTTSTSIPY--TSTPVTSTPLTTTNCTTSTSVPYTSTPVTS 511
Score = 26.2 bits (55), Expect = 5.6
Identities = 50/192 (26%), Positives = 67/192 (34%), Gaps = 16/192 (8%)
Frame = -2
Query: 748 YTMLXNFXHXLNARLNVTSPSS-RLTWCLTPVSTSH---WSRTRQSSLPRRPAMNSFPSP 581
Y L LNA L+ SP T C T S S T +S +S P P
Sbjct: 50 YADLLKRNEDLNASLSTGSPVEITSTSCTTDTSASTPIITESTSSTSSASTTGSSSSPLP 109
Query: 580 RSQTHASS----PPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLP---SKP----S 434
+ T ++ PPT ++ + + T TS P T S S P S
Sbjct: 110 STSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPTTS 169
Query: 433 VLSNSSTGVQPVSRSVS-TTSHPPWCPEATWPRFNVXXXXXXXXXXXPKLGLALTTSSTS 257
+ST + P S S +T P P + ++ L T+STS
Sbjct: 170 TSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSS-PLPTTSTS 228
Query: 256 CTPSVLSCTGTS 221
CT S TG S
Sbjct: 229 CTTSTSIPTGGS 240
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 29.9 bits (64), Expect = 0.46
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = -1
Query: 620 SAEKACHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 453
+ +K CH L ACFEP N C H K C L + KD N ++
Sbjct: 352 TCKKRCHSGLC-----GACFEPINAKCYCG-LHSKTYPCSSLPSPSISKKDENGSV 401
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 28.7 bits (61), Expect = 1.1
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +3
Query: 450 SDGRVHILGYDVTTVQHTASHVLAMTGVAFHHLVGGLEACVCDLGDGKLFMAGLLGRDDW 629
S G +LGY ++ A++V+A + V HL+ G D + K G D
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESK-------GLDML 459
Query: 630 RVRDQWEVDTGVR 668
R Q+E++ G++
Sbjct: 460 VDRVQYELEAGLQ 472
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.4
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -2
Query: 700 VTSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPAMNSFPSPRSQTHASSPPTR 545
V P+++ P S + T +SS+P P N+ PSP S + AS+ P R
Sbjct: 1229 VPVPTAKAPPVPAPSSEAPSVSTPRSSVPS-PHSNASPSPTSSSMASAAPAR 1279
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 26.2 bits (55), Expect = 5.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 628 QSSLPRRPAMNSFPSPRSQTHASSPPTR 545
+ SLPRRP+ +P S T ++ PP +
Sbjct: 738 RGSLPRRPSSALLTNPISITKSNPPPVK 765
>SPAP27G11.09c |||GTP cyclohydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 326
Score = 26.2 bits (55), Expect = 5.6
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -1
Query: 683 QTNLVPYPRIHFPLVTYAPVISAEKACHEQLSVA 582
+TN VP RIH T SA C EQL A
Sbjct: 158 KTNFVPLVRIHSECYTGETAWSARCDCGEQLDEA 191
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -2
Query: 454 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 368
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 25.8 bits (54), Expect = 7.5
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 473 WVRRHHGTAYSKPCTCHDGG 532
W R H Y+KPC DGG
Sbjct: 16 WRRDHPFGFYAKPCKSSDGG 35
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 25.8 bits (54), Expect = 7.5
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -2
Query: 667 LTPVSTSHWSRTRQSSLPRRPAMNSFPSPRSQTHASSPPTRW*NATPVMAS 515
LTP + S +S + +S +R ++N+ PS + +H+SS T + PV+++
Sbjct: 130 LTPKNPSLFSSSNAAS--QRGSLNTAPSNFAYSHSSSLQTSASSRPPVLSN 178
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 25.4 bits (53), Expect = 9.9
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -2
Query: 457 PSLPSKPSVLSNSST--GVQPVSRSVSTTSHPPW 362
P PS+P+++SN ST G+Q V V + W
Sbjct: 531 PISPSRPALISNISTKKGIQVVGNMVYDPTRLRW 564
>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1273
Score = 25.4 bits (53), Expect = 9.9
Identities = 22/84 (26%), Positives = 36/84 (42%)
Frame = -2
Query: 661 PVSTSHWSRTRQSSLPRRPAMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVT 482
P+ SH S + S+ R + + H S PT+ +AT + S AV T
Sbjct: 253 PLDASHLSSQQLLSMYRDQVSHGVTPSTFRNHESFMPTQLVSATELSKSVDNAVLPIPPT 312
Query: 481 SYPRM*TRPSLPSKPSVLSNSSTG 410
+ P + P S P + S +++G
Sbjct: 313 TAPAV-VSPPASSFPLMSSAATSG 335
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,047,700
Number of Sequences: 5004
Number of extensions: 64414
Number of successful extensions: 250
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 248
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 404442380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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