Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_N06
         (865 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125459-4|AAD12839.1|  287|Caenorhabditis elegans Hypothetical ...    29   3.2  
AF125459-3|AAX88817.1|  277|Caenorhabditis elegans Hypothetical ...    29   3.2  
AF125459-2|AAX88818.1|  414|Caenorhabditis elegans Hypothetical ...    29   3.2  
Z81109-6|CAB03253.2|  179|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z78539-2|CAB01729.2|  410|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z11126-7|CAO82061.1|  522|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z11126-6|CAA77471.2|  480|Caenorhabditis elegans Hypothetical pr...    29   5.7  
U00063-2|AAK18961.1|  329|Caenorhabditis elegans Hypothetical pr...    28   9.9  
AL031630-9|CAA20988.1|  345|Caenorhabditis elegans Hypothetical ...    28   9.9  

>AF125459-4|AAD12839.1|  287|Caenorhabditis elegans Hypothetical
           protein Y25C1A.7b protein.
          Length = 287

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 17/34 (50%), Positives = 19/34 (55%)
 Frame = -1

Query: 496 EISGDFGATGGDETIVEGGHGGATSTQYGPPGHV 395
           E SG FG   GD  I+ GG  GATS+   P G V
Sbjct: 26  EQSGAFGGNIGDRNILVGGSVGATSSA-APSGGV 58


>AF125459-3|AAX88817.1|  277|Caenorhabditis elegans Hypothetical
           protein Y25C1A.7a protein.
          Length = 277

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 17/34 (50%), Positives = 19/34 (55%)
 Frame = -1

Query: 496 EISGDFGATGGDETIVEGGHGGATSTQYGPPGHV 395
           E SG FG   GD  I+ GG  GATS+   P G V
Sbjct: 16  EQSGAFGGNIGDRNILVGGSVGATSSA-APSGGV 48


>AF125459-2|AAX88818.1|  414|Caenorhabditis elegans Hypothetical
           protein Y25C1A.7c protein.
          Length = 414

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 17/34 (50%), Positives = 19/34 (55%)
 Frame = -1

Query: 496 EISGDFGATGGDETIVEGGHGGATSTQYGPPGHV 395
           E SG FG   GD  I+ GG  GATS+   P G V
Sbjct: 16  EQSGAFGGNIGDRNILVGGSVGATSSA-APSGGV 48


>Z81109-6|CAB03253.2|  179|Caenorhabditis elegans Hypothetical
           protein R10D12.12 protein.
          Length = 179

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 10/19 (52%), Positives = 16/19 (84%)
 Frame = +1

Query: 259 MVVGNTIFDDDVNQLLCSA 315
           + VG+T+F+D +NQ+LC A
Sbjct: 5   VTVGSTLFEDLINQVLCEA 23


>Z78539-2|CAB01729.2|  410|Caenorhabditis elegans Hypothetical
           protein C31E10.3 protein.
          Length = 410

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +1

Query: 223 LFTSRSTATSKQMVVGNTIFDDDVNQLLCSALTQK*IDILYYHQSLKDC 369
           LF+   +A     +V N+  D     LLC        D++Y H++LKDC
Sbjct: 129 LFSMDFSAIFPIQIVNNSRLDAS---LLCENNNYAAFDVIYVHKNLKDC 174


>Z11126-7|CAO82061.1|  522|Caenorhabditis elegans Hypothetical
           protein ZK643.3b protein.
          Length = 522

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 663 HTDPLGCIVNNSVEVMVLIGYIQXSXYAXFXL 758
           HTD  GC+ N  VE  +L G +  S    F +
Sbjct: 207 HTDYTGCMSNGDVEARILAGLLTYSASVIFLI 238


>Z11126-6|CAA77471.2|  480|Caenorhabditis elegans Hypothetical
           protein ZK643.3a protein.
          Length = 480

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 663 HTDPLGCIVNNSVEVMVLIGYIQXSXYAXFXL 758
           HTD  GC+ N  VE  +L G +  S    F +
Sbjct: 207 HTDYTGCMSNGDVEARILAGLLTYSASVIFLI 238


>U00063-2|AAK18961.1|  329|Caenorhabditis elegans Hypothetical
           protein F56C9.6 protein.
          Length = 329

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 309 FGFNSEINRYFVLPPKLKRLF 371
           FGFNS+INR  + PP  +  F
Sbjct: 201 FGFNSQINRTDIHPPAARHTF 221


>AL031630-9|CAA20988.1|  345|Caenorhabditis elegans Hypothetical
           protein Y38H6C.10 protein.
          Length = 345

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 250 SKQMVVGNTIFDDDVNQLLCSALTQK*ID 336
           +K+MV+GN  F+D  N   CS +  K +D
Sbjct: 35  AKRMVIGNLSFEDRNNIRQCSTVEMKLVD 63


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,810,394
Number of Sequences: 27780
Number of extensions: 254772
Number of successful extensions: 632
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)