Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_N02
         (816 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   6.4  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   6.4  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   6.4  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   8.5  

>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -2

Query: 101 LYGTLSMVFLFVIP 60
           LY T ++VF+F+IP
Sbjct: 348 LYTTFTLVFMFIIP 361


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -1

Query: 378  LVLVSKGECTLVLSISISITVLFNI 304
            LV  +KG  TL+ ++++S+  LFNI
Sbjct: 1731 LVKGAKGIRTLLFALAMSLPALFNI 1755


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -2

Query: 101 LYGTLSMVFLFVIP 60
           LY T ++VF+F+IP
Sbjct: 349 LYTTFTLVFMFIIP 362


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +1

Query: 160 YSFNKRITKSCAVFIILKLKCDVFCILYL 246
           Y F + I      F++++++  VFC +YL
Sbjct: 62  YPFQRIIDNQREDFVVVEMRGIVFCSVYL 90


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,836
Number of Sequences: 2352
Number of extensions: 13693
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)