Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_N01
(773 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0510 - 22816607-22816916,22817005-22817177,22817341-228176... 33 0.33
01_01_0575 - 4271910-4272371,4272923-4272928,4272999-4273174,427... 32 0.58
02_01_0443 + 3204142-3204674,3205446-3206178 31 0.77
03_05_0211 - 22020515-22020687,22020801-22020831,22022060-220221... 31 1.0
04_04_0260 + 23996775-23996865,23997031-23997566,23998407-239988... 30 2.3
02_02_0331 + 9017291-9019084,9019205-9019402,9020014-9020184,902... 30 2.3
04_03_0691 - 18756812-18756883,18757453-18757590,18758017-187583... 29 3.1
03_01_0380 + 2955102-2955357,2955468-2956189 29 5.4
01_06_1837 - 40232102-40232381,40232675-40233702 29 5.4
11_06_0434 - 23512921-23513529 28 7.2
01_03_0231 + 14014243-14014390,14015053-14015141,14017859-140179... 28 7.2
03_02_0786 - 11169820-11170158,11170245-11170433,11171173-111714... 28 9.5
03_02_0433 + 8398455-8399601,8399677-8399976,8400085-8401421 28 9.5
02_05_1232 + 35110891-35111154,35111272-35111448,35111557-351116... 28 9.5
>01_05_0510 -
22816607-22816916,22817005-22817177,22817341-22817607,
22817951-22818393,22818474-22818635,22820991-22821414,
22823177-22823227
Length = 609
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = -3
Query: 639 CKLDETLFDVMERIVRAEVHRLXXXXXXXXVIGIISLSDLLMYLVLRPTGECGVTSLRNE 460
C D +L V++ I HR+ V+G+++L D++ + P G C L +
Sbjct: 536 CSPDASLGSVIDSIASRITHRIYVVDGDFEVVGVVTLRDVISCFIYEPPGYCD-NYLASA 594
Query: 459 HAPIEEK 439
+EEK
Sbjct: 595 MDKLEEK 601
>01_01_0575 -
4271910-4272371,4272923-4272928,4272999-4273174,
4274150-4275299
Length = 597
Score = 31.9 bits (69), Expect = 0.58
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = -3
Query: 477 TSLRNEHAPIEEKDENLNPEDV---AESGDDKSTVSKEQDDSEE 355
T + EH EE++E +PE++ +E D V KE++D EE
Sbjct: 244 TEKKEEHVDEEEEEEEEDPEEMVPASEEEADAEEVEKEEEDPEE 287
>02_01_0443 + 3204142-3204674,3205446-3206178
Length = 421
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -3
Query: 639 CKLDETLFDVMERIVRAEVHRLXXXXXXXXVIGIISLSDLLMYLVLRPTGE 487
C + TL + +E+ V VHRL + G++SL+D+L + GE
Sbjct: 362 CSPESTLGEAIEKAVAHHVHRLWVVDEEGLLAGVVSLTDVLRVVREAAIGE 412
>03_05_0211 -
22020515-22020687,22020801-22020831,22022060-22022169,
22022715-22023102,22023344-22023397,22023739-22023849,
22023956-22024015,22024618-22024694,22026155-22026188,
22026267-22027235
Length = 668
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
Frame = -3
Query: 447 EEKDENLNPE-----DVAESGDDKSTVSKEQDDSEERTQ 346
E+KDEN N E D ESG +K KEQD S Q
Sbjct: 127 EDKDENTNTEKQELKDAKESGSEKQEELKEQDKSGSEKQ 165
>04_04_0260 +
23996775-23996865,23997031-23997566,23998407-23998892,
23998989-23999152,23999220-23999281,23999753-23999907,
24000625-24000738,24001701-24002233,24002512-24002609,
24003108-24003398,24003764-24003830,24003905-24003983
Length = 891
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -3
Query: 456 APIEEKDENLNPEDVAESGDDKSTVSKEQDDSEERTQCPRVKQM 325
+P+++KD+ ED + GDD + ++DD E R R K++
Sbjct: 831 SPVKDKDDAAEDEDGDDDGDDMA----DKDDKETREIASRTKRL 870
>02_02_0331 +
9017291-9019084,9019205-9019402,9020014-9020184,
9020292-9020435,9020552-9020764,9020859-9021929,
9022365-9022391
Length = 1205
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = -3
Query: 480 VTSLRNEHAPIEEKDENLNPE-DVAESGDDKSTVSKEQDDSEERTQCP 340
VT EHAP+ EKD+ P + +SGD S+VS + ++ ++ Q P
Sbjct: 848 VTEAAVEHAPV-EKDQCEEPNTTIVDSGD--SSVSLKNEELQDHDQAP 892
>04_03_0691 -
18756812-18756883,18757453-18757590,18758017-18758308,
18758485-18758648,18759159-18759434,18759512-18759718,
18760303-18760475,18761978-18762139,18762561-18762720
Length = 547
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = -3
Query: 639 CKLDETLFDVMERIVRAEVHRLXXXXXXXXVIGIISLSDLLMYLVLRP 496
C+ D+ + D++ ++ ++HR+ G+I+L D++ LV P
Sbjct: 412 CRRDDEVKDIILKLDSEKIHRIYVIDDKGNTEGVITLRDIISKLVHEP 459
>03_01_0380 + 2955102-2955357,2955468-2956189
Length = 325
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = -3
Query: 447 EEKDENLNPEDVAESGDD--KSTVSKEQDDSEE 355
++K+ N+NP+D A S D ++++ E D S+E
Sbjct: 143 KKKNSNINPKDAASSSSDNEENSLDGESDSSDE 175
>01_06_1837 - 40232102-40232381,40232675-40233702
Length = 435
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/71 (22%), Positives = 33/71 (46%)
Frame = -3
Query: 693 YIETANXHRXEWFEGVQKCKLDETLFDVMERIVRAEVHRLXXXXXXXXVIGIISLSDLLM 514
+I A E + CK +E++ +++ ++ + R+ + G+I+L D++
Sbjct: 350 FIANARQSSGEKQMNIVTCKKEESIKEIIFKLDAEKRQRIYVVDEQGNLDGLITLRDIIA 409
Query: 513 YLVLRPTGECG 481
LV P G G
Sbjct: 410 KLVYEPPGYFG 420
>11_06_0434 - 23512921-23513529
Length = 202
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = -3
Query: 462 EHAPIEEKDENLNPEDVAESGDDKSTVSKEQDDSEE 355
E +EK+++ + ED ES DD+ S++ +++ E
Sbjct: 155 EDDEFDEKEDDSDNEDDEESSDDEEETSEDDEETSE 190
>01_03_0231 +
14014243-14014390,14015053-14015141,14017859-14017949,
14018088-14018215,14018703-14018784,14019022-14019081,
14019160-14019251,14019342-14019462,14019873-14019928,
14020193-14020272,14020774-14020820,14020940-14020989,
14021304-14021366,14021515-14021595,14021703-14021717,
14021875-14021985,14022072-14022147,14022350-14022492,
14022721-14022794,14023364-14023454,14023589-14023687
Length = 598
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 414 VAESGDDKSTVSKEQDDSEERTQCPRVK 331
V + GD T S + DD +++ QC + K
Sbjct: 96 VTDGGDQDKTKSAKDDDGDDKVQCKKEK 123
>03_02_0786 -
11169820-11170158,11170245-11170433,11171173-11171469,
11171568-11171630,11171884-11171997,11173011-11173091,
11173176-11173307,11174265-11174363,11174453-11174530,
11174641-11174901
Length = 550
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = -1
Query: 209 FFWNLMYKISD--CIQSVKNIF 150
FFW LMY+ S CI SVK F
Sbjct: 465 FFWGLMYRTSTNICIDSVKEDF 486
>03_02_0433 + 8398455-8399601,8399677-8399976,8400085-8401421
Length = 927
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = -3
Query: 480 VTSLRNEHAPIEEKDENLNPEDVAESGD---DKSTVSKEQDDSEERTQ 346
VTS + H I D+ L EDVA+ GD ++ TV +E+ ++ E +
Sbjct: 330 VTSPPDPHENIIPHDDELVIEDVAQIGDATAEEETVEEEEVETAEEEE 377
>02_05_1232 +
35110891-35111154,35111272-35111448,35111557-35111626,
35111717-35111788,35111921-35111976
Length = 212
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -3
Query: 630 DETLFDVMERIVRAEVHRLXXXXXXXXVIGIISLSDLLMYL 508
D+T+ D +++ ++HRL VIGI++ +D+L L
Sbjct: 166 DKTVMDAAALMLKKKIHRLPIVNQDRQVIGIVTRADVLREL 206
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,217,464
Number of Sequences: 37544
Number of extensions: 321436
Number of successful extensions: 975
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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