Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_M21
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28739-15|AAK68188.1| 537|Caenorhabditis elegans Hypothetical p... 142 2e-34
U28739-14|AAM54207.1| 535|Caenorhabditis elegans Hypothetical p... 142 2e-34
U80446-4|AAB37804.1| 443|Caenorhabditis elegans Hypothetical pr... 32 0.41
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 32 0.41
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 29 2.9
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 29 3.8
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 29 3.8
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 29 3.8
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 6.6
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 6.6
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 28 6.6
>U28739-15|AAK68188.1| 537|Caenorhabditis elegans Hypothetical
protein C17G10.9a protein.
Length = 537
Score = 142 bits (345), Expect = 2e-34
Identities = 85/204 (41%), Positives = 114/204 (55%), Gaps = 1/204 (0%)
Frame = -2
Query: 676 LLAICLVLHPQCVDESIQQVLREKNYHEKMFKMQYGDLGEFESCFTFACPKFLSACPPPI 497
LLAICL + PQ +DESI L E+ E+M M G++ EF + F CPKFLS
Sbjct: 342 LLAICLAIQPQRIDESIASQLSER-CGERMMHMANGNIDEFRNAFATGCPKFLSPTTVVY 400
Query: 496 EPGANYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGSERDA 317
E G N ++ + QTQ F++ + Q LP +R YLKLYTTLP KLA+FM D
Sbjct: 401 E-GVNQSKEPLLRQTQSFLEGIESQMALPVLRGYLKLYTTLPTKKLASFM--------DV 451
Query: 316 AREHAALAI-HLLCFKHKMKNVVWXKGPSGLDGKFQSGSELDFYIDNDMIHIADTKVAHR 140
EH I LL +K + + GPS D + +++DFY+D DMI+IADTKVA
Sbjct: 452 DDEHYDSFIGKLLTYKMIVNELGKEAGPSSADDD-EPQTDIDFYVDRDMINIADTKVARH 510
Query: 139 YGDFFIRKLLKFEELNRKLHHIKI 68
G+ FIR + K +E+ L + I
Sbjct: 511 VGEHFIRHIQKLQEVQDVLKRLDI 534
>U28739-14|AAM54207.1| 535|Caenorhabditis elegans Hypothetical
protein C17G10.9b protein.
Length = 535
Score = 142 bits (345), Expect = 2e-34
Identities = 85/204 (41%), Positives = 114/204 (55%), Gaps = 1/204 (0%)
Frame = -2
Query: 676 LLAICLVLHPQCVDESIQQVLREKNYHEKMFKMQYGDLGEFESCFTFACPKFLSACPPPI 497
LLAICL + PQ +DESI L E+ E+M M G++ EF + F CPKFLS
Sbjct: 340 LLAICLAIQPQRIDESIASQLSER-CGERMMHMANGNIDEFRNAFATGCPKFLSPTTVVY 398
Query: 496 EPGANYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGSERDA 317
E G N ++ + QTQ F++ + Q LP +R YLKLYTTLP KLA+FM D
Sbjct: 399 E-GVNQSKEPLLRQTQSFLEGIESQMALPVLRGYLKLYTTLPTKKLASFM--------DV 449
Query: 316 AREHAALAI-HLLCFKHKMKNVVWXKGPSGLDGKFQSGSELDFYIDNDMIHIADTKVAHR 140
EH I LL +K + + GPS D + +++DFY+D DMI+IADTKVA
Sbjct: 450 DDEHYDSFIGKLLTYKMIVNELGKEAGPSSADDD-EPQTDIDFYVDRDMINIADTKVARH 508
Query: 139 YGDFFIRKLLKFEELNRKLHHIKI 68
G+ FIR + K +E+ L + I
Sbjct: 509 VGEHFIRHIQKLQEVQDVLKRLDI 532
>U80446-4|AAB37804.1| 443|Caenorhabditis elegans Hypothetical
protein F56A3.2 protein.
Length = 443
Score = 32.3 bits (70), Expect = 0.41
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -3
Query: 528 PNSYRRVPRPLNPVPTMAVMLSNTRPKSLWTRSVNKKCFRPYVPI*NYTPPSR 370
P VP + P ++ + PKS+ RSV+ CF P V N P ++
Sbjct: 56 PEDTDTVPLTIPSTPALSGKFDSKTPKSVRRRSVSMSCFTPIVETINQPPTNQ 108
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 32.3 bits (70), Expect = 0.41
Identities = 35/141 (24%), Positives = 57/141 (40%), Gaps = 3/141 (2%)
Frame = -2
Query: 607 KNYHEKMFKMQYGDLGEFESCFTFACPKFLSACPPPIEPGANYGRDAVKHQTQVFMDEVR 428
K+ HEK ++ + + + A PKF S P + G + ++ T +D
Sbjct: 2126 KSSHEK--RLAHSESSSWRKSLARA-PKFDSKDPKGAKQGEAFEGTLIRKHTYESLDRKA 2182
Query: 427 QQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGSERDAAREHAAL---AIHLLCFKHKMKN 257
RS+ KLY L +L+ + E AL ++++ K KN
Sbjct: 2183 AN------RSWEKLYAVLRQNELSFYKDPKHRDESVHGEPPMALPGCSVNVASDYQKKKN 2236
Query: 256 VVWXKGPSGLDGKFQSGSELD 194
V+ + P G + FQ GSE D
Sbjct: 2237 VLSLRLPIGAEYLFQCGSEED 2257
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 29.5 bits (63), Expect = 2.9
Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 3/141 (2%)
Frame = -2
Query: 607 KNYHEKMFKMQYGDLGEFESCFTFACPKFLSACPPPIEPGANYGRDAVKHQTQVFMDEVR 428
K+ HEK ++ + + + A KF S P + G + ++ T +D
Sbjct: 2126 KSSHEK--RLAHSESSSWRKSLARAA-KFDSKDPKGAKQGEAFEGTLIRKHTYESLDRKA 2182
Query: 427 QQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGSERDAAREHAAL---AIHLLCFKHKMKN 257
RS+ KLY L +L+ + E AL ++++ K KN
Sbjct: 2183 AN------RSWEKLYAVLRQNELSFYKDPKHRDESVHGEPPMALPGCSVNVASDYQKKKN 2236
Query: 256 VVWXKGPSGLDGKFQSGSELD 194
V+ + P G + FQ GSE D
Sbjct: 2237 VLSLRLPIGAEYLFQCGSEED 2257
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = -2
Query: 403 RSYLKLYTTLPMAKLAAFMSAARGSERDAAREHAAL---AIHLLCFKHKMKNVVWXKGPS 233
RS+ KLY L +L+ + E AL ++++ K KNV+ + P
Sbjct: 2140 RSWEKLYAVLRQNELSFYKDPKHRDESVHGEPPMALPGCSVNVASDYQKKKNVLSLRLPI 2199
Query: 232 GLDGKFQSGSELD 194
G + FQ GSE D
Sbjct: 2200 GAEYLFQCGSEED 2212
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = -2
Query: 403 RSYLKLYTTLPMAKLAAFMSAARGSERDAAREHAAL---AIHLLCFKHKMKNVVWXKGPS 233
RS+ KLY L +L+ + E AL ++++ K KNV+ + P
Sbjct: 2140 RSWEKLYAVLRQNELSFYKDPKHRDESVHGEPPMALPGCSVNVASDYQKKKNVLSLRLPI 2199
Query: 232 GLDGKFQSGSELD 194
G + FQ GSE D
Sbjct: 2200 GAEYLFQCGSEED 2212
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = -2
Query: 403 RSYLKLYTTLPMAKLAAFMSAARGSERDAAREHAAL---AIHLLCFKHKMKNVVWXKGPS 233
RS+ KLY L +L+ + E AL ++++ K KNV+ + P
Sbjct: 2140 RSWEKLYAVLRQNELSFYKDPKHRDESVHGEPPMALPGCSVNVASDYQKKKNVLSLRLPI 2199
Query: 232 GLDGKFQSGSELD 194
G + FQ GSE D
Sbjct: 2200 GAEYLFQCGSEED 2212
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 601 SSFLEAPAGWIHQRTGDARPNKWPVM 678
++F APA +I RT DARP + VM
Sbjct: 193 ATFGNAPAAYIGARTPDARPRTYHVM 218
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 601 SSFLEAPAGWIHQRTGDARPNKWPVM 678
++F APA +I RT DARP + VM
Sbjct: 193 ATFGNAPAAYIGARTPDARPRTYHVM 218
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 601 SSFLEAPAGWIHQRTGDARPNKWPVM 678
++F APA +I RT DARP + VM
Sbjct: 193 ATFGNAPAAYIGARTPDARPRTYHVM 218
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,275,488
Number of Sequences: 27780
Number of extensions: 413409
Number of successful extensions: 1027
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -