Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_M19
         (788 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0552 + 4469009-4469080,4470052-4470117,4470808-4470941,447...    89   5e-18
04_04_1390 - 33184233-33184478,33184601-33184705,33184783-331848...    54   1e-07
08_02_0490 - 17724878-17725045,17725264-17725342,17725434-177254...    40   0.003
05_01_0551 + 4827676-4829226                                           29   5.6  

>12_01_0552 +
           4469009-4469080,4470052-4470117,4470808-4470941,
           4471073-4471179,4471695-4471802,4471879-4471949,
           4472126-4472185,4472264-4472319,4472663-4472723,
           4472809-4473076,4473174-4473355,4473444-4473736,
           4474048-4474138
          Length = 522

 Score = 88.6 bits (210), Expect = 5e-18
 Identities = 42/109 (38%), Positives = 62/109 (56%)
 Frame = -3

Query: 621 RXSGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLHSAVVDTCALY 442
           R SGI    LA    T +++Q +  G V  +T+L+GH+LENDL AL++ H  ++DT  LY
Sbjct: 225 RFSGITAEMLADVTTTLQEIQEEFVGLVHKETVLVGHSLENDLMALRISHDLIIDTAVLY 284

Query: 441 PHARGFPMXXXXXXXXXXXXXRTVQRGSNGHSPLEDARAAMDLVLLKVQ 295
            H RG                R +Q   +GH  +EDA+AA++L LLK++
Sbjct: 285 KHNRGHRFKIALRVLAKKFLNREIQNTGSGHDSVEDAKAALELALLKIK 333


>04_04_1390 -
           33184233-33184478,33184601-33184705,33184783-33184890,
           33184967-33185101,33185263-33185363,33185495-33185564,
           33185642-33185758,33186001-33186138,33186371-33186439,
           33186556-33186645,33186758-33186940,33187020-33187052
          Length = 464

 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
 Frame = -3

Query: 615 SGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLHSAVVDTCALYPH 436
           +G+  +DL     +  DVQ  +   +    ILIGH+L  DL ALK  +S V+DT  ++ +
Sbjct: 192 TGLSKKDLKGVTCSLVDVQKSLKKLLSKGKILIGHSLSKDLHALKFDYSRVIDTAYIFKY 251

Query: 435 AR-GFPMXXXXXXXXXXXXXRTVQRGSNGHSPLEDARAAMDLVLLKVQ 295
           A                     V+     H+ L+DA AAM+LVL K++
Sbjct: 252 ANLPTTASASLNSLCKSVLGYAVREEGEPHNCLKDAEAAMNLVLAKLK 299


>08_02_0490 -
           17724878-17725045,17725264-17725342,17725434-17725498,
           17725569-17725657,17725750-17725858,17725969-17726047,
           17727247-17727512
          Length = 284

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
 Frame = -3

Query: 615 SGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLH--SAVVDTCALY 442
           SGIRP+ + +A K    VQ D+   +    IL+GHAL +DL+ L L H    + DT + Y
Sbjct: 142 SGIRPKHMNKA-KDFWVVQKDVAELI-KGRILVGHALHHDLKVLLLGHPKKDIRDT-SEY 198

Query: 441 PHARGFPMXXXXXXXXXXXXXRTVQRGSNGHSPLEDARAAM 319
              R                   +Q+    H P+EDARAAM
Sbjct: 199 EVFRREGKRRSLKDLTAQVLGAKIQQ--KEHCPIEDARAAM 237


>05_01_0551 + 4827676-4829226
          Length = 516

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -3

Query: 501 NDLRALKLLHSAVVDTCALYPHA 433
           ++LRA   LH+AV++T  LYP A
Sbjct: 357 DELRAATYLHAAVLETLRLYPSA 379


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,035,245
Number of Sequences: 37544
Number of extensions: 298963
Number of successful extensions: 696
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)