Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_M19
(788 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF495523-1|AAN77012.1| 318|Homo sapiens exonuclease GOR protein. 94 4e-19
BC032244-1|AAH32244.1| 1221|Homo sapiens REX1, RNA exonuclease 1... 94 6e-19
AB032964-1|BAA86452.1| 1239|Homo sapiens KIAA1138 protein protein. 94 6e-19
BC113453-1|AAI13454.2| 318|Homo sapiens REXO1L1 protein protein. 92 2e-18
BC112074-1|AAI12075.1| 347|Homo sapiens REXO1L2P protein protein. 92 2e-18
AF023669-1|AAC98149.1| 170|Homo sapiens GOR antigen protein. 66 1e-10
BC068503-1|AAH68503.1| 774|Homo sapiens LOC81691 protein protein. 55 3e-07
BC007646-1|AAH07646.1| 774|Homo sapiens exonuclease NEF-sp prot... 55 3e-07
AK057254-1|BAB71397.1| 443|Homo sapiens protein ( Homo sapiens ... 55 3e-07
AF332193-1|AAK17192.1| 774|Homo sapiens exonuclease NEF-sp prot... 55 3e-07
AC004381-4|AAC31668.1| 547|Homo sapiens Unknown gene product pr... 55 3e-07
BC000575-1|AAH00575.1| 353|Homo sapiens ISG20L2 protein protein. 43 0.001
AL590666-6|CAI16341.1| 353|Homo sapiens interferon stimulated e... 43 0.001
AK022733-1|BAB14212.1| 353|Homo sapiens protein ( Homo sapiens ... 43 0.001
BC020988-1|AAH20988.1| 325|Homo sapiens interferon stimulated e... 41 0.004
BC014407-1|AAH14407.1| 209|Homo sapiens ISG20L1 protein protein. 41 0.004
BC005164-1|AAH05164.1| 327|Homo sapiens ISG20L1 protein protein. 41 0.004
AK022546-1|BAB14091.1| 209|Homo sapiens protein ( Homo sapiens ... 41 0.004
AF327352-1|AAL56012.1| 325|Homo sapiens hypothetical protein SB... 41 0.004
AB209323-1|BAD92560.1| 188|Homo sapiens hypothetical protein FL... 41 0.006
BC009274-1|AAH09274.1| 422|Homo sapiens REX4, RNA exonuclease 4... 36 0.22
AL158826-21|CAI12849.1| 422|Homo sapiens REX4, RNA exonuclease ... 36 0.22
AK025493-1|BAB15152.1| 422|Homo sapiens protein ( Homo sapiens ... 36 0.22
AF295774-1|AAG02123.1| 422|Homo sapiens XPMC2H protein. 36 0.22
AF273304-1|AAF98162.1| 422|Homo sapiens XPMC2 protein protein. 36 0.22
AL158826-19|CAI12848.1| 374|Homo sapiens REX4, RNA exonuclease ... 31 6.3
>AF495523-1|AAN77012.1| 318|Homo sapiens exonuclease GOR protein.
Length = 318
Score = 94.3 bits (224), Expect = 4e-19
Identities = 48/110 (43%), Positives = 62/110 (56%)
Frame = -3
Query: 621 RXSGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLHSAVVDTCALY 442
R SG+ D+A+ T VQ + F TILIGH+LE+DL ALKL+HS VVDT L+
Sbjct: 190 RFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVVDTAVLF 249
Query: 441 PHARGFPMXXXXXXXXXXXXXRTVQRGSNGHSPLEDARAAMDLVLLKVQQ 292
PH GFP + +Q NGH+ EDA A + LV+ KV+Q
Sbjct: 250 PHYLGFPYKRSLRNLAADYLAQIIQDSQNGHNSSEDANACLQLVMWKVRQ 299
>BC032244-1|AAH32244.1| 1221|Homo sapiens REX1, RNA exonuclease 1
homolog (S. cerevisiae) protein.
Length = 1221
Score = 93.9 bits (223), Expect = 6e-19
Identities = 49/111 (44%), Positives = 63/111 (56%)
Frame = -3
Query: 621 RXSGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLHSAVVDTCALY 442
R SG+ DLA T RDVQ + DTILIGH+LE+DL ALK++HS VVDT L+
Sbjct: 1106 RFSGVTEADLADTSVTLRDVQAVLLSMFSADTILIGHSLESDLLALKVIHSTVVDTSVLF 1165
Query: 441 PHARGFPMXXXXXXXXXXXXXRTVQRGSNGHSPLEDARAAMDLVLLKVQQE 289
PH G P + +Q +GHS EDA A M LV+ KV+++
Sbjct: 1166 PHRLGLPYKRSLRNLMADYLRQIIQDNVDGHSSSEDAGACMHLVIWKVRED 1216
>AB032964-1|BAA86452.1| 1239|Homo sapiens KIAA1138 protein protein.
Length = 1239
Score = 93.9 bits (223), Expect = 6e-19
Identities = 49/111 (44%), Positives = 63/111 (56%)
Frame = -3
Query: 621 RXSGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLHSAVVDTCALY 442
R SG+ DLA T RDVQ + DTILIGH+LE+DL ALK++HS VVDT L+
Sbjct: 1124 RFSGVTEADLADTSVTLRDVQAVLLSMFSADTILIGHSLESDLLALKVIHSTVVDTSVLF 1183
Query: 441 PHARGFPMXXXXXXXXXXXXXRTVQRGSNGHSPLEDARAAMDLVLLKVQQE 289
PH G P + +Q +GHS EDA A M LV+ KV+++
Sbjct: 1184 PHRLGLPYKRSLRNLMADYLRQIIQDNVDGHSSSEDAGACMHLVIWKVRED 1234
>BC113453-1|AAI13454.2| 318|Homo sapiens REXO1L1 protein protein.
Length = 318
Score = 92.3 bits (219), Expect = 2e-18
Identities = 47/110 (42%), Positives = 62/110 (56%)
Frame = -3
Query: 621 RXSGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLHSAVVDTCALY 442
R SG+ D+A+ T VQ + F TILIGH+LE+DL ALKL+HS VVDT L+
Sbjct: 190 RFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVVDTAVLF 249
Query: 441 PHARGFPMXXXXXXXXXXXXXRTVQRGSNGHSPLEDARAAMDLVLLKVQQ 292
PH GFP + +Q +GH+ EDA A + LV+ KV+Q
Sbjct: 250 PHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACLQLVMWKVRQ 299
>BC112074-1|AAI12075.1| 347|Homo sapiens REXO1L2P protein protein.
Length = 347
Score = 92.3 bits (219), Expect = 2e-18
Identities = 47/110 (42%), Positives = 62/110 (56%)
Frame = -3
Query: 621 RXSGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLHSAVVDTCALY 442
R SG+ D+A+ T VQ + F TILIGH+LE+DL ALKL+HS VVDT L+
Sbjct: 219 RFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVVDTAVLF 278
Query: 441 PHARGFPMXXXXXXXXXXXXXRTVQRGSNGHSPLEDARAAMDLVLLKVQQ 292
PH GFP + +Q +GH+ EDA A + LV+ KV+Q
Sbjct: 279 PHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACLQLVMWKVRQ 328
>AF023669-1|AAC98149.1| 170|Homo sapiens GOR antigen protein.
Length = 170
Score = 66.1 bits (154), Expect = 1e-10
Identities = 40/110 (36%), Positives = 54/110 (49%)
Frame = -3
Query: 621 RXSGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLHSAVVDTCALY 442
R + D+A+ VQ F+ TI GH++E DL ALKL+ S VVDT L+
Sbjct: 59 RFFXVTEADVAKXSXRLPQVQAIXLXFLSAQTIXXGHSVEXDLMALKLIXSTVVDTAVLF 118
Query: 441 PHARGFPMXXXXXXXXXXXXXRTVQRGSNGHSPLEDARAAMDLVLLKVQQ 292
P GFP + Q +GH E A A + +V+ KV+Q
Sbjct: 119 PQYMGFPYKRSLRXXAADXLAQIXQDSQDGHXSSEXANACLQMVMWKVRQ 168
>BC068503-1|AAH68503.1| 774|Homo sapiens LOC81691 protein protein.
Length = 774
Score = 55.2 bits (127), Expect = 3e-07
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = -3
Query: 615 SGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLHSAVVDTCALYPH 436
SGI + L +DVQ + + D +L+GH+L+ DLRALK++H V+DT LY
Sbjct: 276 SGITKKILNPVTTKLKDVQRQLKALLPPDAVLVGHSLDLDLRALKMIHPYVIDTSLLYVR 335
Query: 435 ARGFPMXXXXXXXXXXXXXRTVQRGSN-GHSPLEDARAAMDL 313
+G + +Q GH EDAR ++L
Sbjct: 336 EQG--RRFKLKFLAKVILGKDIQCPDRLGHDATEDARTILEL 375
>BC007646-1|AAH07646.1| 774|Homo sapiens exonuclease NEF-sp
protein.
Length = 774
Score = 55.2 bits (127), Expect = 3e-07
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = -3
Query: 615 SGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLHSAVVDTCALYPH 436
SGI + L +DVQ + + D +L+GH+L+ DLRALK++H V+DT LY
Sbjct: 276 SGITKKILNPVTTKLKDVQRQLKALLPPDAVLVGHSLDLDLRALKMIHPYVIDTSLLYVR 335
Query: 435 ARGFPMXXXXXXXXXXXXXRTVQRGSN-GHSPLEDARAAMDL 313
+G + +Q GH EDAR ++L
Sbjct: 336 EQG--RRFKLKFLAKVILGKDIQCPDRLGHDATEDARTILEL 375
>AK057254-1|BAB71397.1| 443|Homo sapiens protein ( Homo sapiens
cDNA FLJ32692 fis, clone TESTI2000238. ).
Length = 443
Score = 55.2 bits (127), Expect = 3e-07
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = -3
Query: 615 SGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLHSAVVDTCALYPH 436
SGI + L +DVQ + + D +L+GH+L+ DLRALK++H V+DT LY
Sbjct: 276 SGITKKILNPVTTKLKDVQRQLKALLPPDAVLVGHSLDLDLRALKMIHPYVIDTSLLYVR 335
Query: 435 ARGFPMXXXXXXXXXXXXXRTVQRGSN-GHSPLEDARAAMDL 313
+G + +Q GH EDAR ++L
Sbjct: 336 EQG--RRFKLKFLAKVILGKDIQCPDRLGHDATEDARTILEL 375
>AF332193-1|AAK17192.1| 774|Homo sapiens exonuclease NEF-sp
protein.
Length = 774
Score = 55.2 bits (127), Expect = 3e-07
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = -3
Query: 615 SGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLHSAVVDTCALYPH 436
SGI + L +DVQ + + D +L+GH+L+ DLRALK++H V+DT LY
Sbjct: 276 SGITKKILNPVTTKLKDVQRQLKALLPPDAVLVGHSLDLDLRALKMIHPYVIDTSLLYVR 335
Query: 435 ARGFPMXXXXXXXXXXXXXRTVQRGSN-GHSPLEDARAAMDL 313
+G + +Q GH EDAR ++L
Sbjct: 336 EQG--RRFKLKFLAKVILGKDIQCPDRLGHDATEDARTILEL 375
>AC004381-4|AAC31668.1| 547|Homo sapiens Unknown gene product
protein.
Length = 547
Score = 55.2 bits (127), Expect = 3e-07
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = -3
Query: 615 SGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLHSAVVDTCALYPH 436
SGI + L +DVQ + + D +L+GH+L+ DLRALK++H V+DT LY
Sbjct: 187 SGITKKILNPVTTKLKDVQRQLKALLPPDAVLVGHSLDLDLRALKMIHPYVIDTSLLYVR 246
Query: 435 ARGFPMXXXXXXXXXXXXXRTVQRGSN-GHSPLEDARAAMDL 313
+G + +Q GH EDAR ++L
Sbjct: 247 EQG--RRFKLKFLAKVILGKDIQCPDRLGHDATEDARTILEL 286
>BC000575-1|AAH00575.1| 353|Homo sapiens ISG20L2 protein protein.
Length = 353
Score = 42.7 bits (96), Expect = 0.001
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Frame = -3
Query: 621 RXSGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLH--SAVVDTCA 448
R SGIR + + A + + I + T I++GHA+ ND +AL+ H S DT
Sbjct: 228 RWSGIRKQHMVNATP-FKIARGQILKIL-TGKIVVGHAIHNDFKALQYFHPKSLTRDTSH 285
Query: 447 LYPHARGFPMXXXXXXXXXXXXXRTVQR----GSNGHSPLEDARAAMDLV-LLKVQQEQ 286
+ P R + + R G +GHS +EDA+A M+L L++V+ E+
Sbjct: 286 IPPLNRKADCPENATMSLKHLTKKLLNRDIQVGKSGHSSVEDAQATMELYKLVEVEWEE 344
>AL590666-6|CAI16341.1| 353|Homo sapiens interferon stimulated
exonuclease gene 20kDa-liker), member 1 (antiporter,
Na+/ protein.
Length = 353
Score = 42.7 bits (96), Expect = 0.001
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Frame = -3
Query: 621 RXSGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLH--SAVVDTCA 448
R SGIR + + A + + I + T I++GHA+ ND +AL+ H S DT
Sbjct: 228 RWSGIRKQHMVNATP-FKIARGQILKIL-TGKIVVGHAIHNDFKALQYFHPKSLTRDTSH 285
Query: 447 LYPHARGFPMXXXXXXXXXXXXXRTVQR----GSNGHSPLEDARAAMDLV-LLKVQQEQ 286
+ P R + + R G +GHS +EDA+A M+L L++V+ E+
Sbjct: 286 IPPLNRKADCPENATMSLKHLTKKLLNRDIQVGKSGHSSVEDAQATMELYKLVEVEWEE 344
>AK022733-1|BAB14212.1| 353|Homo sapiens protein ( Homo sapiens
cDNA FLJ12671 fis, clone NT2RM4002323, weakly similar to
ANTIGEN GOR. ).
Length = 353
Score = 42.7 bits (96), Expect = 0.001
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Frame = -3
Query: 621 RXSGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLH--SAVVDTCA 448
R SGIR + + A + + I + T I++GHA+ ND +AL+ H S DT
Sbjct: 228 RWSGIRKQHMVNATP-FKIARGQILKIL-TGKIVVGHAIHNDFKALQYFHPKSLTRDTSH 285
Query: 447 LYPHARGFPMXXXXXXXXXXXXXRTVQR----GSNGHSPLEDARAAMDLV-LLKVQQEQ 286
+ P R + + R G +GHS +EDA+A M+L L++V+ E+
Sbjct: 286 IPPLNRKADCPENATMSLKHLTKKLLNRDIQVGKSGHSSVEDAQATMELYKLVEVEWEE 344
>BC020988-1|AAH20988.1| 325|Homo sapiens interferon stimulated
exonuclease gene 20kDa-like 1 protein.
Length = 325
Score = 41.1 bits (92), Expect = 0.004
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Frame = -3
Query: 621 RXSGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLH--SAVVDTCA 448
R SGI + + +A + Q +I + +++GHAL ND +ALK +H S DT
Sbjct: 159 RWSGITRQHMRKAVP-FQVAQKEILKLL-KGKVVVGHALHNDFQALKYVHPRSQTRDTTY 216
Query: 447 LYPHARGFP-----MXXXXXXXXXXXXXRTVQRGSNGHSPLEDARAAMDLV-LLKVQQEQ 286
+ P+ P + +Q G +GHS +EDA AM+L L++VQ EQ
Sbjct: 217 V-PNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLVEVQWEQ 275
>BC014407-1|AAH14407.1| 209|Homo sapiens ISG20L1 protein protein.
Length = 209
Score = 41.1 bits (92), Expect = 0.004
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Frame = -3
Query: 621 RXSGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLH--SAVVDTCA 448
R SGI + + +A + Q +I + +++GHAL ND +ALK +H S DT
Sbjct: 43 RWSGITRQHMRKAVP-FQVAQKEILKLL-KGKVVVGHALHNDFQALKYVHPRSQTRDTTY 100
Query: 447 LYPHARGFP-----MXXXXXXXXXXXXXRTVQRGSNGHSPLEDARAAMDLV-LLKVQQEQ 286
+ P+ P + +Q G +GHS +EDA AM+L L++VQ EQ
Sbjct: 101 V-PNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLVEVQWEQ 159
>BC005164-1|AAH05164.1| 327|Homo sapiens ISG20L1 protein protein.
Length = 327
Score = 41.1 bits (92), Expect = 0.004
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Frame = -3
Query: 621 RXSGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLH--SAVVDTCA 448
R SGI + + +A + Q +I + +++GHAL ND +ALK +H S DT
Sbjct: 159 RWSGITRQHMRKAVP-FQVAQKEILKLL-KGKVVVGHALHNDFQALKYVHPRSQTRDTTY 216
Query: 447 LYPHARGFP-----MXXXXXXXXXXXXXRTVQRGSNGHSPLEDARAAMDLV-LLKVQQEQ 286
+ P+ P + +Q G +GHS +EDA AM+L L++VQ EQ
Sbjct: 217 V-PNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLVEVQWEQ 275
>AK022546-1|BAB14091.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12484 fis, clone NT2RM1001102, weakly similar to
Human HEM45 mRNA. ).
Length = 209
Score = 41.1 bits (92), Expect = 0.004
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Frame = -3
Query: 621 RXSGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLH--SAVVDTCA 448
R SGI + + +A + Q +I + +++GHAL ND +ALK +H S DT
Sbjct: 43 RWSGITRQHMRKAVP-FQVAQKEILKLL-KGKVVVGHALHNDFQALKYVHPRSQTRDTTY 100
Query: 447 LYPHARGFP-----MXXXXXXXXXXXXXRTVQRGSNGHSPLEDARAAMDLV-LLKVQQEQ 286
+ P+ P + +Q G +GHS +EDA AM+L L++VQ EQ
Sbjct: 101 V-PNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLVEVQWEQ 159
>AF327352-1|AAL56012.1| 325|Homo sapiens hypothetical protein
SBBI58 protein.
Length = 325
Score = 41.1 bits (92), Expect = 0.004
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Frame = -3
Query: 621 RXSGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLH--SAVVDTCA 448
R SGI + + +A + Q +I + +++GHAL ND +ALK +H S DT
Sbjct: 159 RWSGITRQHMRKAVP-FQVAQKEILKLL-KGKVVVGHALHNDFQALKYVHPRSQTRDTTY 216
Query: 447 LYPHARGFP-----MXXXXXXXXXXXXXRTVQRGSNGHSPLEDARAAMDLV-LLKVQQEQ 286
+ P+ P + +Q G +GHS +EDA AM+L L++VQ EQ
Sbjct: 217 V-PNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLVEVQWEQ 275
>AB209323-1|BAD92560.1| 188|Homo sapiens hypothetical protein
FLJ12484 variant protein.
Length = 188
Score = 40.7 bits (91), Expect = 0.006
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Frame = -3
Query: 525 ILIGHALENDLRALKLLH--SAVVDTCALYPHARGFP-----MXXXXXXXXXXXXXRTVQ 367
+++GHAL ND +ALK +H S DT + P+ P + +Q
Sbjct: 52 VVVGHALHNDFQALKYVHPRSQTRDTTYV-PNFLSEPGLHTRARVSLKDLALQLLHKKIQ 110
Query: 366 RGSNGHSPLEDARAAMDLV-LLKVQQEQ 286
G +GHS +EDA AM+L L++VQ EQ
Sbjct: 111 VGQHGHSSVEDATTAMELYRLVEVQWEQ 138
>BC009274-1|AAH09274.1| 422|Homo sapiens REX4, RNA exonuclease 4
homolog (S. cerevisiae) protein.
Length = 422
Score = 35.5 bits (78), Expect = 0.22
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 3/116 (2%)
Frame = -3
Query: 615 SGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLH--SAVVDTCALY 442
SGIRP +L + + VQ ++ + IL+GHAL NDL+ L L H + DT Y
Sbjct: 294 SGIRPENLKQGEEL-EVVQKEVAEML-KGRILVGHALHNDLKVLFLDHPKKKIRDT-QKY 350
Query: 441 PHARGFPMXXXXXXXXXXXXXRTVQRGSNGHSPLEDARAAMDL-VLLKVQQEQANR 277
+ +Q H ++DA+AAM L V++K + E R
Sbjct: 351 KPFKSQVKSGRPSLRLLSEKILGLQVQQAEHCSIQDAQAAMRLYVMVKKEWESMAR 406
>AL158826-21|CAI12849.1| 422|Homo sapiens REX4, RNA exonuclease 4
homolog (S. cerevisiae) protein.
Length = 422
Score = 35.5 bits (78), Expect = 0.22
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 3/116 (2%)
Frame = -3
Query: 615 SGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLH--SAVVDTCALY 442
SGIRP +L + + VQ ++ + IL+GHAL NDL+ L L H + DT Y
Sbjct: 294 SGIRPENLKQGEEL-EVVQKEVAEML-KGRILVGHALHNDLKVLFLDHPKKKIRDT-QKY 350
Query: 441 PHARGFPMXXXXXXXXXXXXXRTVQRGSNGHSPLEDARAAMDL-VLLKVQQEQANR 277
+ +Q H ++DA+AAM L V++K + E R
Sbjct: 351 KPFKSQVKSGRPSLRLLSEKILGLQVQQAEHCSIQDAQAAMRLYVMVKKEWESMAR 406
>AK025493-1|BAB15152.1| 422|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21840 fis, clone HEP01804. ).
Length = 422
Score = 35.5 bits (78), Expect = 0.22
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 3/116 (2%)
Frame = -3
Query: 615 SGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLH--SAVVDTCALY 442
SGIRP +L + + VQ ++ + IL+GHAL NDL+ L L H + DT Y
Sbjct: 294 SGIRPENLKQGEEL-EVVQKEVAEML-KGRILVGHALHNDLKVLFLDHPKKKIRDT-QKY 350
Query: 441 PHARGFPMXXXXXXXXXXXXXRTVQRGSNGHSPLEDARAAMDL-VLLKVQQEQANR 277
+ +Q H ++DA+AAM L V++K + E R
Sbjct: 351 KPFKSQVKSGRPSLRLLSEKILGLQVQQAEHCSIQDAQAAMRLYVMVKKEWESMAR 406
>AF295774-1|AAG02123.1| 422|Homo sapiens XPMC2H protein.
Length = 422
Score = 35.5 bits (78), Expect = 0.22
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 3/116 (2%)
Frame = -3
Query: 615 SGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLH--SAVVDTCALY 442
SGIRP +L + + VQ ++ + IL+GHAL NDL+ L L H + DT Y
Sbjct: 294 SGIRPENLKQGEEL-EVVQKEVAEML-KGRILVGHALHNDLKVLFLDHPKKKIRDT-QKY 350
Query: 441 PHARGFPMXXXXXXXXXXXXXRTVQRGSNGHSPLEDARAAMDL-VLLKVQQEQANR 277
+ +Q H ++DA+AAM L V++K + E R
Sbjct: 351 KPFKSQVKSGRPSLRLLSEKILGLQVQQAEHCSIQDAQAAMRLYVMVKKEWESMAR 406
>AF273304-1|AAF98162.1| 422|Homo sapiens XPMC2 protein protein.
Length = 422
Score = 35.5 bits (78), Expect = 0.22
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 3/116 (2%)
Frame = -3
Query: 615 SGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLH--SAVVDTCALY 442
SGIRP +L + + VQ ++ + IL+GHAL NDL+ L L H + DT Y
Sbjct: 294 SGIRPENLKQGEEL-EVVQKEVAEML-KGRILVGHALHNDLKVLFLDHPKKKIRDT-QKY 350
Query: 441 PHARGFPMXXXXXXXXXXXXXRTVQRGSNGHSPLEDARAAMDL-VLLKVQQEQANR 277
+ +Q H ++DA+AAM L V++K + E R
Sbjct: 351 KPFKSQVKSGRPSLRLLSEKILGLQVQQAEHCSIQDAQAAMRLYVMVKKEWESMAR 406
>AL158826-19|CAI12848.1| 374|Homo sapiens REX4, RNA exonuclease 4
homolog (S. cerevisiae) protein.
Length = 374
Score = 30.7 bits (66), Expect = 6.3
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = -3
Query: 615 SGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRA 487
SGIRP +L + + VQ ++ + IL+GHAL NDL++
Sbjct: 279 SGIRPENLKQGEEL-EVVQKEVAEML-KGRILVGHALHNDLKS 319
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,673,886
Number of Sequences: 237096
Number of extensions: 1624313
Number of successful extensions: 2903
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2895
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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