Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_M19
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132860-27|CAB60521.1| 365|Caenorhabditis elegans Hypothetical... 58 9e-09
AC006620-4|AAF39778.1| 305|Caenorhabditis elegans Hypothetical ... 58 9e-09
U39850-9|AAM45371.1| 440|Caenorhabditis elegans Polyq (poly glu... 56 3e-08
U39850-8|AAM45369.1| 558|Caenorhabditis elegans Polyq (poly glu... 56 3e-08
U39850-7|AAM45370.1| 573|Caenorhabditis elegans Polyq (poly glu... 56 3e-08
U39850-5|AAM45368.1| 670|Caenorhabditis elegans Polyq (poly glu... 56 3e-08
U39850-4|ABB51184.1| 672|Caenorhabditis elegans Polyq (poly glu... 56 3e-08
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 56 3e-08
AF016430-4|AAB65372.1| 594|Caenorhabditis elegans Hypothetical ... 54 9e-08
AL023828-14|CAA19458.1| 269|Caenorhabditis elegans Hypothetical... 39 0.004
AF038604-4|AAO38680.1| 134|Caenorhabditis elegans Hypothetical ... 29 2.9
AF038604-3|AAB92012.1| 161|Caenorhabditis elegans Hypothetical ... 29 2.9
AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical... 29 3.8
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical... 29 3.8
U88179-4|AAU05547.1| 576|Caenorhabditis elegans Hypothetical pr... 28 6.6
U88179-3|AAX88809.1| 751|Caenorhabditis elegans Hypothetical pr... 28 6.6
U88179-2|AAU05546.1| 770|Caenorhabditis elegans Hypothetical pr... 28 6.6
>AL132860-27|CAB60521.1| 365|Caenorhabditis elegans Hypothetical
protein Y56A3A.33 protein.
Length = 365
Score = 57.6 bits (133), Expect = 9e-09
Identities = 30/105 (28%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Frame = -3
Query: 615 SGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLHSAVVDTCALY-- 442
SG+ +D+ A + + + + ++T+L+GH+LE+DL+AL+L+H V+DT L+
Sbjct: 229 SGVTEKDMESAI-SLEACRLQLFQLINSETLLVGHSLESDLKALRLVHHNVIDTAVLFSI 287
Query: 441 -PHARGFPMXXXXXXXXXXXXXRTVQRGSNGHSPLEDARAAMDLV 310
+R + + + VQ ++GHS +ED+ M+L+
Sbjct: 288 VDPSRSYILKLSLQNLAKKYLCKDVQSEASGHSSIEDSHTCMELL 332
>AC006620-4|AAF39778.1| 305|Caenorhabditis elegans Hypothetical
protein C51G7.1 protein.
Length = 305
Score = 57.6 bits (133), Expect = 9e-09
Identities = 30/105 (28%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Frame = -3
Query: 615 SGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLHSAVVDTCALY-- 442
SG+ +D+ A + + + + ++T+L+GH+LE+DL+AL+L+H V+DT L+
Sbjct: 192 SGVTEKDMESAI-SLEACRLQLFQLINSETLLVGHSLESDLKALRLVHHNVIDTAVLFSI 250
Query: 441 -PHARGFPMXXXXXXXXXXXXXRTVQRGSNGHSPLEDARAAMDLV 310
+R + + + VQ ++GHS +ED+ M+L+
Sbjct: 251 VDPSRSYILKLSLQNLAKKYLCKDVQSEASGHSSIEDSHTCMELL 295
>U39850-9|AAM45371.1| 440|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform f
protein.
Length = 440
Score = 56.0 bits (129), Expect = 3e-08
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Frame = -3
Query: 615 SGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLHSAVVDTCALYPH 436
SG+ + A T + + +V DTILIGH+LE+DL+A++++H V+DT L+
Sbjct: 319 SGLTMEQINSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRVVHKNVIDTAILFRS 378
Query: 435 ARGFPMXXXXXXXXXXXXXRT-VQRGSNGHSPLEDARAAMDLVLLKVQQEQA 283
R + + GH +EDA +DL+ ++ ++
Sbjct: 379 TRDTKVALKVLSAKLLHKNIQGDNEDAIGHDSMEDALTCVDLIFYGLRNPES 430
>U39850-8|AAM45369.1| 558|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform d
protein.
Length = 558
Score = 56.0 bits (129), Expect = 3e-08
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Frame = -3
Query: 615 SGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLHSAVVDTCALYPH 436
SG+ + A T + + +V DTILIGH+LE+DL+A++++H V+DT L+
Sbjct: 437 SGLTMEQINSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRVVHKNVIDTAILFRS 496
Query: 435 ARGFPMXXXXXXXXXXXXXRT-VQRGSNGHSPLEDARAAMDLVLLKVQQEQA 283
R + + GH +EDA +DL+ ++ ++
Sbjct: 497 TRDTKVALKVLSAKLLHKNIQGDNEDAIGHDSMEDALTCVDLIFYGLRNPES 548
>U39850-7|AAM45370.1| 573|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform e
protein.
Length = 573
Score = 56.0 bits (129), Expect = 3e-08
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Frame = -3
Query: 615 SGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLHSAVVDTCALYPH 436
SG+ + A T + + +V DTILIGH+LE+DL+A++++H V+DT L+
Sbjct: 452 SGLTMEQINSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRVVHKNVIDTAILFRS 511
Query: 435 ARGFPMXXXXXXXXXXXXXRT-VQRGSNGHSPLEDARAAMDLVLLKVQQEQA 283
R + + GH +EDA +DL+ ++ ++
Sbjct: 512 TRDTKVALKVLSAKLLHKNIQGDNEDAIGHDSMEDALTCVDLIFYGLRNPES 563
>U39850-5|AAM45368.1| 670|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform c
protein.
Length = 670
Score = 56.0 bits (129), Expect = 3e-08
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Frame = -3
Query: 615 SGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLHSAVVDTCALYPH 436
SG+ + A T + + +V DTILIGH+LE+DL+A++++H V+DT L+
Sbjct: 549 SGLTMEQINSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRVVHKNVIDTAILFRS 608
Query: 435 ARGFPMXXXXXXXXXXXXXRT-VQRGSNGHSPLEDARAAMDLVLLKVQQEQA 283
R + + GH +EDA +DL+ ++ ++
Sbjct: 609 TRDTKVALKVLSAKLLHKNIQGDNEDAIGHDSMEDALTCVDLIFYGLRNPES 660
>U39850-4|ABB51184.1| 672|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform g
protein.
Length = 672
Score = 56.0 bits (129), Expect = 3e-08
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Frame = -3
Query: 615 SGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLHSAVVDTCALYPH 436
SG+ + A T + + +V DTILIGH+LE+DL+A++++H V+DT L+
Sbjct: 551 SGLTMEQINSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRVVHKNVIDTAILFRS 610
Query: 435 ARGFPMXXXXXXXXXXXXXRT-VQRGSNGHSPLEDARAAMDLVLLKVQQEQA 283
R + + GH +EDA +DL+ ++ ++
Sbjct: 611 TRDTKVALKVLSAKLLHKNIQGDNEDAIGHDSMEDALTCVDLIFYGLRNPES 662
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 56.0 bits (129), Expect = 3e-08
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Frame = -3
Query: 615 SGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLHSAVVDTCALYPH 436
SG+ + A T + + +V DTILIGH+LE+DL+A++++H V+DT L+
Sbjct: 1526 SGLTMEQINSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRVVHKNVIDTAILFRS 1585
Query: 435 ARGFPMXXXXXXXXXXXXXRT-VQRGSNGHSPLEDARAAMDLVLLKVQQEQA 283
R + + GH +EDA +DL+ ++ ++
Sbjct: 1586 TRDTKVALKVLSAKLLHKNIQGDNEDAIGHDSMEDALTCVDLIFYGLRNPES 1637
>AF016430-4|AAB65372.1| 594|Caenorhabditis elegans Hypothetical
protein C05C8.5 protein.
Length = 594
Score = 54.4 bits (125), Expect = 9e-08
Identities = 34/110 (30%), Positives = 49/110 (44%)
Frame = -3
Query: 621 RXSGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLHSAVVDTCALY 442
R SGI P + T DVQ I + D IL+GH+LE+DL+A+K+ H +D +
Sbjct: 268 RWSGITPDMMEGVTTTLGDVQKAIQSLLPPDAILVGHSLEHDLQAMKMTHPFCLDVGHVL 327
Query: 441 PHARGFPMXXXXXXXXXXXXXRTVQRGSNGHSPLEDARAAMDLVLLKVQQ 292
+ + GH EDA AAM L LK+++
Sbjct: 328 NYTNSNTEFRNSLKNLTELFLGAQIQSEFGHCSYEDAWAAMRLAQLKLEK 377
>AL023828-14|CAA19458.1| 269|Caenorhabditis elegans Hypothetical
protein Y17G7B.12 protein.
Length = 269
Score = 39.1 bits (87), Expect = 0.004
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 4/105 (3%)
Frame = -3
Query: 615 SGIRPRDLARAXKTXRDVQNDIXGFVGTDTILIGHALENDLRALKLLH--SAVVDT--CA 448
SGIRP ++ +A R Q ++ + I+IGHA+ ND R LKL H DT C
Sbjct: 153 SGIRPENMIKAIPFDR-AQTEVSKLID-GRIVIGHAVHNDFRVLKLNHIRKLTRDTAKCT 210
Query: 447 LYPHARGFPMXXXXXXXXXXXXXRTVQRGSNGHSPLEDARAAMDL 313
+ + +QRG H + DAR A+ L
Sbjct: 211 ILKNMANHHGTPSLKKLAKEVLGIEIQRGE--HDSITDARVALRL 253
>AF038604-4|AAO38680.1| 134|Caenorhabditis elegans Hypothetical
protein B0546.4b protein.
Length = 134
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/50 (22%), Positives = 23/50 (46%)
Frame = -2
Query: 481 VIAQRSCRYMCFISTRTRIPNAPITTRPIRGASGPYCTKRQQWSLAIGRC 332
+ R Y C + + +T++ G++GP ++ W++ GRC
Sbjct: 8 ICGARGSLYGCVVCNTYLTCSKELTSKAFTGSTGPATLFKRAWNVVYGRC 57
>AF038604-3|AAB92012.1| 161|Caenorhabditis elegans Hypothetical
protein B0546.4a protein.
Length = 161
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/50 (22%), Positives = 23/50 (46%)
Frame = -2
Query: 481 VIAQRSCRYMCFISTRTRIPNAPITTRPIRGASGPYCTKRQQWSLAIGRC 332
+ R Y C + + +T++ G++GP ++ W++ GRC
Sbjct: 8 ICGARGSLYGCVVCNTYLTCSKELTSKAFTGSTGPATLFKRAWNVVYGRC 57
>AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical
protein Y43F8B.3b protein.
Length = 1398
Score = 29.1 bits (62), Expect = 3.8
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 12/80 (15%)
Frame = -2
Query: 442 STRTRIPNAPITTRPIRGASGPYCTKRQQWSLAIGRC-----SSCYG-------FGAT*S 299
S+R++ P+ T P + +GPY R ++ GRC S C G F S
Sbjct: 65 SSRSQPPSGQSCTLPRQIGTGPYRIPRWYYNPVRGRCELFYWSGCCGNGNNFQTFQTCQS 124
Query: 298 TAGASEQSTQHIISTTYFAT 239
T AS Q+T S F+T
Sbjct: 125 TCEASSQTTSQTSSQIVFST 144
>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
protein Y43F8B.3a protein.
Length = 1816
Score = 29.1 bits (62), Expect = 3.8
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 12/80 (15%)
Frame = -2
Query: 442 STRTRIPNAPITTRPIRGASGPYCTKRQQWSLAIGRC-----SSCYG-------FGAT*S 299
S+R++ P+ T P + +GPY R ++ GRC S C G F S
Sbjct: 65 SSRSQPPSGQSCTLPRQIGTGPYRIPRWYYNPVRGRCELFYWSGCCGNGNNFQTFQTCQS 124
Query: 298 TAGASEQSTQHIISTTYFAT 239
T AS Q+T S F+T
Sbjct: 125 TCEASSQTTSQTSSQIVFST 144
>U88179-4|AAU05547.1| 576|Caenorhabditis elegans Hypothetical
protein R57.1b protein.
Length = 576
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -3
Query: 546 GFVGTDTILIGHALENDLRALKLLHSAVVDTCALYPHARGF 424
G D + I H ND + LKL+ + AL + GF
Sbjct: 157 GSASADVVYINHGTANDFKNLKLMGVDIKGKIALMRYGHGF 197
>U88179-3|AAX88809.1| 751|Caenorhabditis elegans Hypothetical
protein R57.1c protein.
Length = 751
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -3
Query: 546 GFVGTDTILIGHALENDLRALKLLHSAVVDTCALYPHARGF 424
G D + I H ND + LKL+ + AL + GF
Sbjct: 157 GSASADVVYINHGTANDFKNLKLMGVDIKGKIALMRYGHGF 197
>U88179-2|AAU05546.1| 770|Caenorhabditis elegans Hypothetical
protein R57.1a protein.
Length = 770
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -3
Query: 546 GFVGTDTILIGHALENDLRALKLLHSAVVDTCALYPHARGF 424
G D + I H ND + LKL+ + AL + GF
Sbjct: 176 GSASADVVYINHGTANDFKNLKLMGVDIKGKIALMRYGHGF 216
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,854,830
Number of Sequences: 27780
Number of extensions: 271099
Number of successful extensions: 562
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 551
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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