Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_M15
(827 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0799 - 19805190-19805749,19806316-19806403 33 0.37
01_06_0171 - 27190072-27190645,27190800-27190955,27191932-27192359 31 0.85
02_05_0584 - 30135768-30135790,30136104-30136866 30 2.0
12_01_0229 + 1731288-1732513,1733037-1733106,1733267-1734001 29 3.4
11_01_0232 + 1794081-1795175,1796087-1796782 29 3.4
06_03_0310 - 19453047-19453160,19453240-19453338,19453441-194535... 29 3.4
03_04_0069 - 17022468-17023361 29 3.4
02_05_1283 - 35444811-35445146,35445428-35445613,35445700-35445834 29 3.4
02_03_0315 - 17610605-17610855,17611304-17611370,17612876-176129... 29 3.4
01_01_0070 - 542603-542686,542803-543441 29 3.4
02_05_0555 - 29937973-29938395,29938509-29938790 29 4.5
02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317 29 4.5
01_06_1817 - 40091188-40092198 29 4.5
06_03_0905 + 25843547-25844314 29 6.0
01_07_0260 - 42364769-42364777,42364884-42365354 29 6.0
12_01_0269 + 1965126-1965169,1965398-1966064,1966181-1966693 28 7.9
07_01_0662 + 4972953-4973645,4973758-4974046,4974790-4974803,497... 28 7.9
05_07_0327 - 29275916-29276017,29276101-29276283,29276392-292764... 28 7.9
04_03_0864 + 20401025-20401810 28 7.9
02_01_0190 + 1276808-1278214,1278450-1278743,1278815-1279087,127... 28 7.9
>04_03_0799 - 19805190-19805749,19806316-19806403
Length = 215
Score = 32.7 bits (71), Expect = 0.37
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = -2
Query: 733 RTRSPTPVVKHVGVPVKCPSTGPTPVHVPAPXPRREASAFCCPS*EASGLPRPCSC 566
+ + PV K V PV P+ P P P P CCP+ P+PC C
Sbjct: 88 KKKDEKPVCKLVPFPVPYPAPPPPPACCP---PSTHQCYHCCPA-PPKPKPKPCEC 139
>01_06_0171 - 27190072-27190645,27190800-27190955,27191932-27192359
Length = 385
Score = 31.5 bits (68), Expect = 0.85
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 734 PYPQPYPRCEARRCPRQVPVDRPY 663
PYP+ Y RC ++CP + V+R Y
Sbjct: 192 PYPRSYYRCTTQKCPVKKRVERSY 215
>02_05_0584 - 30135768-30135790,30136104-30136866
Length = 261
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = -2
Query: 721 PTPVVKHVGVPVKCPSTG-PTPVHVPAPXPRREASAFCCPS*EASGLPRP 575
P P G P S+G P P+ P P P + A P SGLP P
Sbjct: 104 PAPGSPAAGAPPSSGSSGFPFPMPSPLPLPAHGSPAAGAPPSSGSGLPFP 153
>12_01_0229 + 1731288-1732513,1733037-1733106,1733267-1734001
Length = 676
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -2
Query: 721 PTPVVKHVGVPVKCPSTGPTPVHVPAPXP 635
P +H+ VPV CP+ P P P P
Sbjct: 21 PADPARHIAVPVLCPTPQPPPPSSPPAPP 49
>11_01_0232 + 1794081-1795175,1796087-1796782
Length = 596
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -2
Query: 721 PTPVVKHVGVPVKCPSTGPTPVHVPAPXP 635
P +H+ VPV CP+ P P P P
Sbjct: 21 PADPARHIAVPVLCPTPQPPPPSSPPAPP 49
>06_03_0310 -
19453047-19453160,19453240-19453338,19453441-19453513,
19453598-19453708,19453795-19453956,19454064-19454340,
19454542-19455160,19455256-19455471
Length = 556
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -2
Query: 727 RSPTPVVKHVGVPVKCPSTGPTPVHVPAPXPRR 629
+ P P + H P + PTP PAP P R
Sbjct: 161 QDPAPSLPHAPAPPPPQAPAPTPPQAPAPTPPR 193
>03_04_0069 - 17022468-17023361
Length = 297
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -2
Query: 721 PTPVVKHVGVPVKCPSTGPTPVHVPAPXP 635
P +H+ VPV CP+ P P P P
Sbjct: 21 PADPARHIAVPVLCPTPQPPPPSSPPAPP 49
>02_05_1283 - 35444811-35445146,35445428-35445613,35445700-35445834
Length = 218
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -2
Query: 667 PTPVHVPAPXPRREASAFCCPS*EASGLPRP 575
P VH P P R +SA PS +S PRP
Sbjct: 6 PAAVHTPRPASIRSSSASARPSVGSSSTPRP 36
>02_03_0315 -
17610605-17610855,17611304-17611370,17612876-17612941,
17613037-17613158,17613245-17613428,17614262-17614494,
17614580-17614913,17615043-17615186,17615303-17615344
Length = 480
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -2
Query: 712 VVKHVGVPVKCPSTGPTPVHVPA-PXPRREASAFCCPS*EASGLP 581
V+K VP P+T P P PA P P +++ A P+ A P
Sbjct: 254 VMKEAPVPAPIPATRPAPAARPAPPKPEKQSPAPPAPAPVADATP 298
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -2
Query: 784 PTYPGKTRAIPRXS*GARTRSPTPVVKHVGVPVKCPSTGP--TPVHVPAPXPRR 629
PT P K+ P A T +PTP V P K P P PV P P P++
Sbjct: 42 PTAPAKSPPAPATP--APTATPTPPV----APAKAPPVAPAVAPVTPPPPTPKK 89
>02_05_0555 - 29937973-29938395,29938509-29938790
Length = 234
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 724 SPTPVVKHVGVPVKCPSTGPTPVHVPAPXPRREASA 617
S TP+V H ST P H PA RR+A+A
Sbjct: 168 SSTPIVSHYPPYAVIGSTPPAVPHFPATAARRKAAA 203
>02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317
Length = 291
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -2
Query: 724 SPTPVVKHVGVPVKCPSTGPTPVHVPAPXPRREASA 617
SP P PV P P P PAP PR A A
Sbjct: 134 SPPPPPPAPAAPVLVPPPAPAPRPAPAPAPRVPARA 169
>01_06_1817 - 40091188-40092198
Length = 336
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +3
Query: 576 GRGRPLASQLGQQKALASRRG*GAGTCTGVGPVDGHLTGTPTCFTTGVGLR 728
G G + + +G + +R G GAG GVG G G GVG R
Sbjct: 62 GAGAGVGAGIGANVGVGARAGVGAGVGAGVGAKVGAGVGAKVGAGAGVGAR 112
>06_03_0905 + 25843547-25844314
Length = 255
Score = 28.7 bits (61), Expect = 6.0
Identities = 21/55 (38%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = -2
Query: 793 VQGP--TYPGKTRAIPRXS*GARTRSPTPVVKHVGVPVKCPSTGPTPVHVPAPXP 635
V GP TYP P G PTP V + PV P T PT P P P
Sbjct: 114 VVGPPVTYPTPPVTTPPVVVGPPVTYPTPPVTYPTPPVTYP-TPPTTTPCPPPPP 167
>01_07_0260 - 42364769-42364777,42364884-42365354
Length = 159
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +2
Query: 641 RSRHMHGGRACRRA--LDGDTDVLHNGGRAAGTGPLTSTGYGT 763
RS HGG A R + G ++ H GG AAG G G GT
Sbjct: 78 RSEEDHGGDAIGRGEGVAGCSEEDHGGGAAAGRGEEVHGGGGT 120
>12_01_0269 + 1965126-1965169,1965398-1966064,1966181-1966693
Length = 407
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/34 (50%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 641 RSRHMHGGRA--CRRALDGDTDVLHNGGRAAGTG 736
R R GG A A DGD DVL GG AG G
Sbjct: 15 RGRSYGGGTAELGEAAADGDGDVLGEGGGEAGVG 48
>07_01_0662 +
4972953-4973645,4973758-4974046,4974790-4974803,
4974848-4974856
Length = 334
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -2
Query: 715 PVVKHVGVPVKCPSTGPTPVHVPAPXPR-REAS 620
P H P + PS PTP PA PR R AS
Sbjct: 163 PAAPHYKTPSRGPSPVPTPALAPASPPRHRPAS 195
>05_07_0327 -
29275916-29276017,29276101-29276283,29276392-29276453,
29276590-29276671,29276922-29276987,29277297-29277359,
29277466-29277570,29277678-29277887,29277988-29278103,
29278875-29279082
Length = 398
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 364 RDWLLDCYGHVPLNSYGVGPVNGHFDGNGDWPVDR 468
+D L+D Y +VP YG+ P N D P DR
Sbjct: 67 KDGLMDNYKNVPQFLYGLSPAQIEMFMNDDNPYDR 101
>04_03_0864 + 20401025-20401810
Length = 261
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +3
Query: 585 RPLASQLGQQKALASRRG*GAGTCTGVGPV 674
RP+A LG+ K LASRR G GPV
Sbjct: 229 RPVAVGLGEMKRLASRRWPETMAVAGQGPV 258
>02_01_0190 +
1276808-1278214,1278450-1278743,1278815-1279087,
1279204-1279336,1279425-1279551,1279788-1280284,
1280578-1280642,1280722-1280823,1281020-1281162,
1281761-1281816,1282214-1282869,1282975-1283165,
1283280-1283574,1283738-1283778,1284082-1284104,
1284173-1284369,1284472-1284581,1285309-1285639,
1285968-1286060,1286095-1286166,1286626-1286886
Length = 1788
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -2
Query: 721 PTPVVK-HVGVPVKCPSTGPTPVHVPAPXPRREASA 617
P+P+ + ++ P+ P P P+P PRR SA
Sbjct: 67 PSPIAQLKTLASIRAPAPSPKPSPSPSPSPRRSTSA 102
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,117,546
Number of Sequences: 37544
Number of extensions: 361266
Number of successful extensions: 1746
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1683
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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