Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_M14
(823 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 41 2e-04
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 36 0.009
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 31 0.15
SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ... 31 0.20
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 30 0.46
SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces po... 28 1.8
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 28 1.8
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 27 4.3
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 26 5.6
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 26 5.6
SPAC644.11c |||pyruvate dehydrogenase |Schizosaccharomyces pombe... 26 7.4
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 26 7.4
SPCC1259.13 |chk1|rad27|Chk1 protein kinase|Schizosaccharomyces ... 26 7.4
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 26 7.4
SPBC106.13 |||conserved eukaryotic protein|Schizosaccharomyces p... 25 9.8
SPBC2G5.06c |hmt2|cad1|sulfide-quinone oxidoreductase|Schizosacc... 25 9.8
SPCC162.12 ||SPCC1753.06c|sequence orphan|Schizosaccharomyces po... 25 9.8
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 41.1 bits (92), Expect = 2e-04
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = -2
Query: 489 LWQKAMNILKLEDISEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFETSTK 310
++ KA + D+ A + + L ++P+NVE LV RG + SG KAI F+ + K
Sbjct: 146 MYLKAQVYIFQNDMDRAQKIAHDVLRLNPKNVEALVLRGKVMYYSGENAKAITHFQEALK 205
Query: 309 AESKSCKCKKIFG--RNIGRTRTQ 244
+ K +F R + T+ Q
Sbjct: 206 LDPDCTTAKTLFKQVRKLENTKNQ 229
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 35.5 bits (78), Expect = 0.009
Identities = 23/77 (29%), Positives = 34/77 (44%)
Frame = -2
Query: 471 NILKLEDISEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFETSTKAESKSC 292
N + +D +A KA+ IDP + R A Y G F+ A+ED T +
Sbjct: 92 NAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVEDALTCLSLDPHHA 151
Query: 291 KCKKIFGRNIGRTRTQL 241
+ FGR +GR + L
Sbjct: 152 RA---FGR-LGRAKLSL 164
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 31.5 bits (68), Expect = 0.15
Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Frame = -2
Query: 534 QMNYAKHKQVNGHFVLWQKAMNILKLE-DISEAFQCLNKALSIDPRNVEGLVARGALYAN 358
++ +H + L KA+ + + + DIS+A +ALS DP + +
Sbjct: 511 ELEKREHLTIMSAMPLINKALAVFQWKKDISQAENLCRQALSADPECDIAIASMAQFLLQ 570
Query: 357 SGTFKKAIEDFETSTKAESKSCKCKKIFGRNIGRTRTQL 241
G ++A+E FE S + + F TRTQ+
Sbjct: 571 QGKAREALEYFEKSAQLARTESEMVNAFS-YAEATRTQI 608
>SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex
subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 31.1 bits (67), Expect = 0.20
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = -2
Query: 546 HRNTQMNYAKHKQVN-GHFVLWQK-AMNILKLEDISEAFQCLNKALSIDPRNVEGLVARG 373
+ ++ ++ K +VN H+ W M LK +A +A I+P N + G
Sbjct: 481 YEKSKTSFRKAIRVNVRHYNAWYGLGMVYLKTGRNDQADFHFQRAAEINPNNSVLITCIG 540
Query: 372 ALYANSGTFKKAIEDFETSTKAESKS 295
+Y +KKA++ ++ + K + KS
Sbjct: 541 MIYERCKDYKKALDFYDRACKLDEKS 566
Score = 27.5 bits (58), Expect = 2.4
Identities = 17/84 (20%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = -2
Query: 549 LHRNTQMNYAKHK--QVNGHFV-LWQKAMNILKLE-DISEAFQCLNKALSIDPRNVEGLV 382
L ++ ++Y H+ + N + W N L+ + S+A +C+N+A+ +DP
Sbjct: 410 LQKSVPLSYLAHETLETNPYSPESWCILANCFSLQREHSQALKCINRAIQLDPTFEYAYT 469
Query: 381 ARGALYANSGTFKKAIEDFETSTK 310
+G ++ + ++K+ F + +
Sbjct: 470 LQGHEHSANEEYEKSKTSFRKAIR 493
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 29.9 bits (64), Expect = 0.46
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -3
Query: 278 YLGETLVALGRSYED-ENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEP 102
Y+ E LG YE NQI++A AY+ + P + + L L+ ++
Sbjct: 650 YISEVWYDLGTLYESCHNQISDALDAYQRAAELDPTNPHIKARLQLLRGPNNEQHKIVNA 709
Query: 101 AELLLPGLTGAK 66
+P + AK
Sbjct: 710 PPSNVPNVQTAK 721
Score = 27.5 bits (58), Expect = 2.4
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -3
Query: 254 LGRSYEDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTAS 120
+G YE + A++AYE LA P H + L +L + ++S
Sbjct: 518 IGHVYEQRKEYKLAKEAYERVLAETPNHAKVLQQLGWLCHQQSSS 562
>SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 949
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -3
Query: 239 EDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEPAELL 90
EDEN K EDC A + F + SL ++S T + L + +LL
Sbjct: 684 EDENHRVHHVKVSEDCTATVSF---GKQSLHIVRSSVTLLETLDDYGKLL 730
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/77 (24%), Positives = 33/77 (42%)
Frame = -3
Query: 257 ALGRSYEDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEPAELLLPGL 78
AL Y + + K Y++ LAI P +E +L+++ +PL + LL
Sbjct: 81 ALAIVYRETKDYNNSLKCYQNALAISPNNESLWYDAAYLQAQLGLYQPLFDNWNRLLQLD 140
Query: 77 TGAKSYEMKETLKQLLN 27
+ Y + TL L+
Sbjct: 141 SSNLEYRLCFTLSAFLS 157
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 26.6 bits (56), Expect = 4.3
Identities = 22/78 (28%), Positives = 37/78 (47%)
Frame = -3
Query: 239 EDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEPAELLLPGLTGAKSY 60
E N + E +YE+CLAI+ EE + SL + K +E E + S
Sbjct: 915 EKANAMKERSLSYEECLAIV---EEGE-SLQLKTPELLYFKQYMEKTEWI--DSFNQISQ 968
Query: 59 EMKETLKQLLNLTEKKKK 6
+ T+++L+ L E+ +K
Sbjct: 969 KTDSTMEELVELIERGEK 986
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 26.2 bits (55), Expect = 5.6
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = -3
Query: 245 SYEDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEPAELLLPG 81
+Y+DEN + + D I E S+ F KSKT+ + I A + G
Sbjct: 889 NYDDENSLNRGGTSESDSEFIWDVDESNSGSIVFPKSKTSINLNNINSASASIMG 943
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -3
Query: 329 ILRPQLKLNPNHANARKYLGETLVALGRSYEDENQITEAQK 207
+L +K NP H A K+LG LG + EA K
Sbjct: 316 LLEQSVKENPQHFEAWKWLGRIHTLLGNESRVVEALLEAVK 356
>SPAC644.11c |||pyruvate dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +1
Query: 325 KIFYGLFECSTIGVQCSSSNKTLYISRIYAQSFIQALK 438
++ YGLFE I + C S + +Y+ + + LK
Sbjct: 262 RLAYGLFEAPEIQIICDPSLEMMYVESHLNHAVFEILK 299
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 203 YEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEPAEL 93
+ED + E SLD LK+KT+ P++ EL
Sbjct: 445 WEDARYFSKENRELLRSLDSLKAKTSKKDPIVRRNEL 481
>SPCC1259.13 |chk1|rad27|Chk1 protein kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 496
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -3
Query: 179 PFHEEAQNSLDFLKSKTTASKPLIEPAELLLPG 81
P+ E N+ D+L K +P P LL PG
Sbjct: 212 PWDEAISNTGDYLLYKKQCERPSYHPWNLLSPG 244
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/75 (17%), Positives = 36/75 (48%)
Frame = -2
Query: 519 KHKQVNGHFVLWQKAMNILKLEDISEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKK 340
+HK +N HF++ +M L++E + + L + + + + VE + + + + K
Sbjct: 900 RHKSLNEHFIMLSDSMANLQVEHENMSALLLKEKMYLKNQTVEQASLKSEIASLNSQLAK 959
Query: 339 AIEDFETSTKAESKS 295
+ E + + + ++
Sbjct: 960 QKSEIEQAFQGDMEA 974
>SPBC106.13 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 404
Score = 25.4 bits (53), Expect = 9.8
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +2
Query: 287 HLHDLDSALVEVSKSSMAFLN 349
HLHD ++ ++ +KS + F+N
Sbjct: 79 HLHDCEALFIKQTKSRLLFMN 99
>SPBC2G5.06c |hmt2|cad1|sulfide-quinone
oxidoreductase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 459
Score = 25.4 bits (53), Expect = 9.8
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -2
Query: 663 YWRRAQA-SIIPTAFNSSLNILALPTRTAQISHI*EEDSLHRNTQMNY 523
YWRR + S I +F + + L R + + + + + LHRN ++NY
Sbjct: 218 YWRRHKVRSNIDVSFYTGMPTLFSVKRYSD-ALLRQNEQLHRNVKINY 264
>SPCC162.12 ||SPCC1753.06c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 451
Score = 25.4 bits (53), Expect = 9.8
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -2
Query: 600 ALPTRTAQISHI*EEDSLHRNTQMNYAKHKQVNGHFVLWQKAMN 469
+L ++ +SH+ ++ SL+ ++N KH NG L Q+ N
Sbjct: 76 SLVNNSSAVSHLTKQRSLNDLHELNGPKHVAKNGLIPLTQRKPN 119
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,108,480
Number of Sequences: 5004
Number of extensions: 64484
Number of successful extensions: 246
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 246
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 402440190
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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