Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_M12
         (850 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    27   0.95 
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    26   1.3  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   6.7  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   8.9  

>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 26.6 bits (56), Expect = 0.95
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -1

Query: 535 SRAPNSYRRVPRPLNPVPTMAVMLSNTRPKSLWTRS 428
           S+ P SY  +P P+  VP+    +  +RP+++  RS
Sbjct: 45  SKMPTSYPSLPAPI--VPSPGAPIQQSRPQAVTVRS 78


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
 Frame = -1

Query: 529 APNSYRRVPRPLNPVPTMAVMLSNTRPKSLWTRSVNKKCF--RPYVPI*NYTPPSRW 365
           +PN+Y      + P PT    L  T P S   ++  ++ F  R ++ +  Y  PS W
Sbjct: 166 SPNAYTNTTIAVQPAPTQPHELVGTDPLSSPLQAAPREPFTDRIWIRLSAYQRPSLW 222


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 549 SNSPRSPYCIXTSSHGSSFLEALLDGFINALRMQDQ 656
           +N  +S  C   S  G + + +L++ F N   +QDQ
Sbjct: 602 NNLNQSMACTIVSQGGENDIASLMNTFFNIEEVQDQ 637


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 9/37 (24%), Positives = 17/37 (45%)
 Frame = +2

Query: 221 IKTTGAFXSKLRSSFCA*SRASEWREPHVHVPRHAHC 331
           I+ TG F +      C  + ++ W   ++H P+   C
Sbjct: 889 IQLTGTFPTLYSCVSCHKTVSNRWHHANIHRPQSHEC 925


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 844,000
Number of Sequences: 2352
Number of extensions: 18094
Number of successful extensions: 30
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)