Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_M12
         (850 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089607-1|AAL90345.1|  539|Drosophila melanogaster RE21692p pro...   150   3e-36
AE014296-2102|AAF49952.1|  539|Drosophila melanogaster CG5642-PA...   150   3e-36
M25294-1|AAA17842.1|  151|Drosophila melanogaster dsx protein.         29   6.1  
AE014297-674|AAF54169.1|  549|Drosophila melanogaster CG11094-PA...    29   6.1  

>AY089607-1|AAL90345.1|  539|Drosophila melanogaster RE21692p
           protein.
          Length = 539

 Score =  150 bits (363), Expect = 3e-36
 Identities = 79/144 (54%), Positives = 96/144 (66%), Gaps = 2/144 (1%)
 Frame = -3

Query: 671 LLAXCLVLHPQCVDESIQQCL-EKRTTMRRCXNAIWRPR*IRELLTFACPKFLSACPPPI 495
           LLA CLVLHPQC+DESIQQ L EK                 +    FACP+F+S CPP +
Sbjct: 341 LLAICLVLHPQCIDESIQQVLREKNYHDAMFKMQCGDLEVFKSFFVFACPRFVSPCPPAV 400

Query: 494 E-PGANYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGSERD 318
           + P  +Y +D ++HQ QVFMDEVRQQK LPT RSYLKLYTTLP+ KLA+F+     SE D
Sbjct: 401 DAPMDDYVKDPMEHQLQVFMDEVRQQKDLPTTRSYLKLYTTLPLTKLASFID-PNASEDD 459

Query: 317 AAREHAALAIHLLCFKHKMKNVVW 246
            ++    L I LLCFKHKM+N+VW
Sbjct: 460 VSK----LLIRLLCFKHKMRNLVW 479



 Score =  108 bits (259), Expect = 1e-23
 Identities = 47/59 (79%), Positives = 55/59 (93%)
 Frame = -1

Query: 241 KGPSGLDGKFQSGSELDFYIDNDMIHIADTKVAHRYGDFFIRKLLKFEELNRKLHHIKI 65
           KGPSGL+G F+SGSELDFYID+DMIHIADTKV+HRYGDFF+RK+LKF +LNRKL +I I
Sbjct: 481 KGPSGLEGTFKSGSELDFYIDDDMIHIADTKVSHRYGDFFVRKILKFNDLNRKLKNINI 539


>AE014296-2102|AAF49952.1|  539|Drosophila melanogaster CG5642-PA
           protein.
          Length = 539

 Score =  150 bits (363), Expect = 3e-36
 Identities = 79/144 (54%), Positives = 96/144 (66%), Gaps = 2/144 (1%)
 Frame = -3

Query: 671 LLAXCLVLHPQCVDESIQQCL-EKRTTMRRCXNAIWRPR*IRELLTFACPKFLSACPPPI 495
           LLA CLVLHPQC+DESIQQ L EK                 +    FACP+F+S CPP +
Sbjct: 341 LLAICLVLHPQCIDESIQQVLREKNYHDAMFKMQCGDLEVFKSFFVFACPRFVSPCPPAV 400

Query: 494 E-PGANYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFMSAARGSERD 318
           + P  +Y +D ++HQ QVFMDEVRQQK LPT RSYLKLYTTLP+ KLA+F+     SE D
Sbjct: 401 DAPMDDYVKDPMEHQLQVFMDEVRQQKDLPTTRSYLKLYTTLPLTKLASFID-PNASEDD 459

Query: 317 AAREHAALAIHLLCFKHKMKNVVW 246
            ++    L I LLCFKHKM+N+VW
Sbjct: 460 VSK----LLIRLLCFKHKMRNLVW 479



 Score =  108 bits (259), Expect = 1e-23
 Identities = 47/59 (79%), Positives = 55/59 (93%)
 Frame = -1

Query: 241 KGPSGLDGKFQSGSELDFYIDNDMIHIADTKVAHRYGDFFIRKLLKFEELNRKLHHIKI 65
           KGPSGL+G F+SGSELDFYID+DMIHIADTKV+HRYGDFF+RK+LKF +LNRKL +I I
Sbjct: 481 KGPSGLEGTFKSGSELDFYIDDDMIHIADTKVSHRYGDFFVRKILKFNDLNRKLKNINI 539


>M25294-1|AAA17842.1|  151|Drosophila melanogaster dsx protein.
          Length = 151

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 17/46 (36%), Positives = 19/46 (41%)
 Frame = -2

Query: 558 VNSRAAYFRVPQILIGVSPAH*TRCQLWP*CCQTPDPSLYGRGPST 421
           VN    Y   P I  G   AH T   L   C  TP+P    R PS+
Sbjct: 22  VNGAPMYLTYPSIEQGRYGAHFTHLPLTQICPPTPEPLALSRSPSS 67


>AE014297-674|AAF54169.1|  549|Drosophila melanogaster CG11094-PA,
           isoform A protein.
          Length = 549

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 17/46 (36%), Positives = 19/46 (41%)
 Frame = -2

Query: 558 VNSRAAYFRVPQILIGVSPAH*TRCQLWP*CCQTPDPSLYGRGPST 421
           VN    Y   P I  G   AH T   L   C  TP+P    R PS+
Sbjct: 420 VNGAPMYLTYPSIEQGRYGAHFTHLPLTQICPPTPEPLALSRSPSS 465


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,648,430
Number of Sequences: 53049
Number of extensions: 832146
Number of successful extensions: 1950
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1942
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4065385896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)