Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_M12
(850 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28739-15|AAK68188.1| 537|Caenorhabditis elegans Hypothetical p... 85 8e-17
U28739-14|AAM54207.1| 535|Caenorhabditis elegans Hypothetical p... 85 8e-17
U80446-4|AAB37804.1| 443|Caenorhabditis elegans Hypothetical pr... 32 0.45
U41533-2|AAA83163.1| 568|Caenorhabditis elegans Hypothetical pr... 32 0.45
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 29 5.5
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 29 5.5
AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein. 29 5.5
AF003135-5|AAK18990.1| 678|Caenorhabditis elegans Hypothetical ... 29 5.5
AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical ... 29 5.5
AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ... 29 5.5
U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in bl... 28 7.3
>U28739-15|AAK68188.1| 537|Caenorhabditis elegans Hypothetical
protein C17G10.9a protein.
Length = 537
Score = 84.6 bits (200), Expect = 8e-17
Identities = 47/109 (43%), Positives = 58/109 (53%)
Frame = -3
Query: 671 LLAXCLVLHPQCVDESIQQCLEKRTTMRRCXNAIWRPR*IRELLTFACPKFLSACPPPIE 492
LLA CL + PQ +DESI L +R R A R CPKFLS E
Sbjct: 342 LLAICLAIQPQRIDESIASQLSERCGERMMHMANGNIDEFRNAFATGCPKFLSPTTVVYE 401
Query: 491 PGANYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFM 345
G N ++ + QTQ F++ + Q LP +R YLKLYTTLP KLA+FM
Sbjct: 402 -GVNQSKEPLLRQTQSFLEGIESQMALPVLRGYLKLYTTLPTKKLASFM 449
Score = 54.8 bits (126), Expect = 7e-08
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = -1
Query: 238 GPSGLDGKFQSGSELDFYIDNDMIHIADTKVAHRYGDFFIRKLLKFEELNRKLHHIKI 65
GPS D + +++DFY+D DMI+IADTKVA G+ FIR + K +E+ L + I
Sbjct: 478 GPSSADDD-EPQTDIDFYVDRDMINIADTKVARHVGEHFIRHIQKLQEVQDVLKRLDI 534
>U28739-14|AAM54207.1| 535|Caenorhabditis elegans Hypothetical
protein C17G10.9b protein.
Length = 535
Score = 84.6 bits (200), Expect = 8e-17
Identities = 47/109 (43%), Positives = 58/109 (53%)
Frame = -3
Query: 671 LLAXCLVLHPQCVDESIQQCLEKRTTMRRCXNAIWRPR*IRELLTFACPKFLSACPPPIE 492
LLA CL + PQ +DESI L +R R A R CPKFLS E
Sbjct: 340 LLAICLAIQPQRIDESIASQLSERCGERMMHMANGNIDEFRNAFATGCPKFLSPTTVVYE 399
Query: 491 PGANYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMAKLAAFM 345
G N ++ + QTQ F++ + Q LP +R YLKLYTTLP KLA+FM
Sbjct: 400 -GVNQSKEPLLRQTQSFLEGIESQMALPVLRGYLKLYTTLPTKKLASFM 447
Score = 54.8 bits (126), Expect = 7e-08
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = -1
Query: 238 GPSGLDGKFQSGSELDFYIDNDMIHIADTKVAHRYGDFFIRKLLKFEELNRKLHHIKI 65
GPS D + +++DFY+D DMI+IADTKVA G+ FIR + K +E+ L + I
Sbjct: 476 GPSSADDD-EPQTDIDFYVDRDMINIADTKVARHVGEHFIRHIQKLQEVQDVLKRLDI 532
>U80446-4|AAB37804.1| 443|Caenorhabditis elegans Hypothetical
protein F56A3.2 protein.
Length = 443
Score = 32.3 bits (70), Expect = 0.45
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -1
Query: 526 PNSYRRVPRPLNPVPTMAVMLSNTRPKSLWTRSVNKKCFRPYVPI*NYTPPSR 368
P VP + P ++ + PKS+ RSV+ CF P V N P ++
Sbjct: 56 PEDTDTVPLTIPSTPALSGKFDSKTPKSVRRRSVSMSCFTPIVETINQPPTNQ 108
>U41533-2|AAA83163.1| 568|Caenorhabditis elegans Hypothetical
protein R05F9.6 protein.
Length = 568
Score = 32.3 bits (70), Expect = 0.45
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 499 GGGHADKNLGHAKVSSSRIHLGLH 570
GGGH D NL +AK R+H G H
Sbjct: 264 GGGHPDPNLTYAKTLVERLHTGEH 287
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 4/96 (4%)
Frame = -3
Query: 680 NVPLLAXCLVLHPQCVDESIQQCLEKRTTMRRCXNAIWRPR*IRELLTFACPKFLSACPP 501
N+ + A C PQC + QQCL ++ +++C +P + A P+ + C P
Sbjct: 195 NLGISAQCA---PQCQQQCQQQCLLQQVPVQQCYQECTQP--CQTTCQQAAPQCVQQCAP 249
Query: 500 ----PIEPGANYGRDAVKHQTQVFMDEVRQQKMLPT 405
P P ++ + V + Q LP+
Sbjct: 250 QCQQPSAPQCQQCQNTCQQYAPVCQQQCAPQCTLPS 285
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 4/96 (4%)
Frame = -3
Query: 680 NVPLLAXCLVLHPQCVDESIQQCLEKRTTMRRCXNAIWRPR*IRELLTFACPKFLSACPP 501
N+ + A C PQC + QQCL ++ +++C +P + A P+ + C P
Sbjct: 196 NLGISAQCA---PQCQQQCQQQCLLQQVPVQQCYQECTQP--CQTTCQQAAPQCVQQCAP 250
Query: 500 ----PIEPGANYGRDAVKHQTQVFMDEVRQQKMLPT 405
P P ++ + V + Q LP+
Sbjct: 251 QCQQPSAPQCQQCQNTCQQYAPVCQQQCAPQCTLPS 286
>AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.
Length = 1666
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = -1
Query: 634 LMNPSSSASRKELP*EDVXMQYGDLGEFESCLLSRAPNSYRRVPRPLNPVPTMAVMLSNT 455
L+ SS+A+R+ +D+ DL E S L PN R+P P VPT+ SN
Sbjct: 1262 LVGYSSNAAREST--QDIHRALNDL-ELNSPLARSTPNEEYRIPPP--RVPTVTSTSSNY 1316
Query: 454 RP 449
P
Sbjct: 1317 AP 1318
>AF003135-5|AAK18990.1| 678|Caenorhabditis elegans Hypothetical
protein W03F11.6b protein.
Length = 678
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = -1
Query: 634 LMNPSSSASRKELP*EDVXMQYGDLGEFESCLLSRAPNSYRRVPRPLNPVPTMAVMLSNT 455
L+ SS+A+R+ +D+ DL E S L PN R+P P VPT+ SN
Sbjct: 280 LVGYSSNAAREST--QDIHRALNDL-ELNSPLARSTPNEEYRIPPP--RVPTVTSTSSNY 334
Query: 454 RP 449
P
Sbjct: 335 AP 336
>AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical
protein W03F11.6c protein.
Length = 1419
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = -1
Query: 634 LMNPSSSASRKELP*EDVXMQYGDLGEFESCLLSRAPNSYRRVPRPLNPVPTMAVMLSNT 455
L+ SS+A+R+ +D+ DL E S L PN R+P P VPT+ SN
Sbjct: 1260 LVGYSSNAAREST--QDIHRALNDL-ELNSPLARSTPNEEYRIPPP--RVPTVTSTSSNY 1314
Query: 454 RP 449
P
Sbjct: 1315 AP 1316
>AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical
protein W03F11.6a protein.
Length = 1658
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = -1
Query: 634 LMNPSSSASRKELP*EDVXMQYGDLGEFESCLLSRAPNSYRRVPRPLNPVPTMAVMLSNT 455
L+ SS+A+R+ +D+ DL E S L PN R+P P VPT+ SN
Sbjct: 1260 LVGYSSNAAREST--QDIHRALNDL-ELNSPLARSTPNEEYRIPPP--RVPTVTSTSSNY 1314
Query: 454 RP 449
P
Sbjct: 1315 AP 1316
>U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 3 protein.
Length = 242
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -3
Query: 683 ANVPLLAXCLVLHPQCVDESIQQCLEKRTTMRRCXNA 573
A+V A C PQC QQC++++ +M++C +A
Sbjct: 166 ASVSQSAQC---EPQCQQSCQQQCVQQQQSMQQCASA 199
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,458,686
Number of Sequences: 27780
Number of extensions: 402721
Number of successful extensions: 1016
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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