Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_M07
(774 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 192 2e-49
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 192 2e-49
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 95 4e-20
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 95 4e-20
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 59 4e-09
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical ... 30 2.1
U70844-3|AAB09093.2| 209|Caenorhabditis elegans Hypothetical pr... 29 4.9
AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical ... 29 4.9
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical protein
F25H5.4 protein.
Length = 852
Score = 192 bits (469), Expect = 2e-49
Identities = 88/112 (78%), Positives = 94/112 (83%)
Frame = -1
Query: 543 PVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFT 364
P L V+ PE AVGGIYGVLNRRRGHVFEESQV GTPMF+VKAYLPVNESFGFT
Sbjct: 732 PRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFT 791
Query: 363 ADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLP 208
ADLRSNTGGQAFPQCVFDHWQVLPGDP E +KP +V +TRKRKGLKEG+P
Sbjct: 792 ADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVP 843
Score = 116 bits (279), Expect = 2e-26
Identities = 51/72 (70%), Positives = 62/72 (86%)
Frame = -3
Query: 700 AXKEGVMAEENLRGVRFNXYDVTLHTDAIHRGGGQIIPTXRRCLYACLLTAQPRLMEPVY 521
A +EGV+++EN+RGVRFN +DVTLH DAIHRGGGQIIPT RR YA +LTA+PRL+EPVY
Sbjct: 680 ATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVY 739
Query: 520 LCEIQCP*SSCG 485
L EIQCP ++ G
Sbjct: 740 LVEIQCPEAAVG 751
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 192 bits (469), Expect = 2e-49
Identities = 88/112 (78%), Positives = 94/112 (83%)
Frame = -1
Query: 543 PVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFT 364
P L V+ PE AVGGIYGVLNRRRGHVFEESQV GTPMF+VKAYLPVNESFGFT
Sbjct: 732 PRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFT 791
Query: 363 ADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLP 208
ADLRSNTGGQAFPQCVFDHWQVLPGDP E +KP +V +TRKRKGLKEG+P
Sbjct: 792 ADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVP 843
Score = 116 bits (279), Expect = 2e-26
Identities = 51/72 (70%), Positives = 62/72 (86%)
Frame = -3
Query: 700 AXKEGVMAEENLRGVRFNXYDVTLHTDAIHRGGGQIIPTXRRCLYACLLTAQPRLMEPVY 521
A +EGV+++EN+RGVRFN +DVTLH DAIHRGGGQIIPT RR YA +LTA+PRL+EPVY
Sbjct: 680 ATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVY 739
Query: 520 LCEIQCP*SSCG 485
L EIQCP ++ G
Sbjct: 740 LVEIQCPEAAVG 751
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 95.5 bits (227), Expect = 4e-20
Identities = 50/124 (40%), Positives = 71/124 (57%), Gaps = 12/124 (9%)
Frame = -1
Query: 552 LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 373
+ +P L Y V+ P V +Y VL +RRGHV ++ + G+PM+ + AY+PV +SF
Sbjct: 826 MATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSF 885
Query: 372 GFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEP---------QSKPY---NVVQETRKRK 229
GF DLR +T GQAF F HWQ++PGDP + Q P+ + +TR+RK
Sbjct: 886 GFETDLRIHTQGQAFCMSAFHHWQLVPGDPLDKSIVIKTLDVQPTPHLAREFMIKTRRRK 945
Query: 228 GLKE 217
GL E
Sbjct: 946 GLSE 949
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/67 (49%), Positives = 44/67 (65%)
Frame = -3
Query: 700 AXKEGVMAEENLRGVRFNXYDVTLHTDAIHRGGGQIIPTXRRCLYACLLTAQPRLMEPVY 521
A +EG + EE +R V+F D + T+ ++RGGGQ+IPT RRC Y+ L A PRLMEP Y
Sbjct: 777 ATREGPLCEEPIRQVKFKLLDAAIATEPLYRGGGQMIPTARRCAYSAFLMATPRLMEPYY 836
Query: 520 LCEIQCP 500
E+ P
Sbjct: 837 TVEVVAP 843
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 95.5 bits (227), Expect = 4e-20
Identities = 50/124 (40%), Positives = 71/124 (57%), Gaps = 12/124 (9%)
Frame = -1
Query: 552 LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 373
+ +P L Y V+ P V +Y VL +RRGHV ++ + G+PM+ + AY+PV +SF
Sbjct: 701 MATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSF 760
Query: 372 GFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEP---------QSKPY---NVVQETRKRK 229
GF DLR +T GQAF F HWQ++PGDP + Q P+ + +TR+RK
Sbjct: 761 GFETDLRIHTQGQAFCMSAFHHWQLVPGDPLDKSIVIKTLDVQPTPHLAREFMIKTRRRK 820
Query: 228 GLKE 217
GL E
Sbjct: 821 GLSE 824
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/67 (49%), Positives = 44/67 (65%)
Frame = -3
Query: 700 AXKEGVMAEENLRGVRFNXYDVTLHTDAIHRGGGQIIPTXRRCLYACLLTAQPRLMEPVY 521
A +EG + EE +R V+F D + T+ ++RGGGQ+IPT RRC Y+ L A PRLMEP Y
Sbjct: 652 ATREGPLCEEPIRQVKFKLLDAAIATEPLYRGGGQMIPTARRCAYSAFLMATPRLMEPYY 711
Query: 520 LCEIQCP 500
E+ P
Sbjct: 712 TVEVVAP 718
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 58.8 bits (136), Expect = 4e-09
Identities = 29/70 (41%), Positives = 39/70 (55%)
Frame = -1
Query: 492 AVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVF 313
A+G ++ VL++R+ V E T +F V + +PV ESF F LR T G A Q F
Sbjct: 769 ALGKVHAVLSQRKSKVLSEDINEATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQF 828
Query: 312 DHWQVLPGDP 283
HWQV+ DP
Sbjct: 829 SHWQVIDEDP 838
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/55 (43%), Positives = 28/55 (50%)
Frame = -1
Query: 447 VFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 283
V E T +F V + +PV ESF F LR T G A Q F HWQV+ DP
Sbjct: 595 VLSEDINEATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQFSHWQVIDEDP 649
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = -1
Query: 516 VKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGG 337
V+ +VP G + L +R + G I +A P+++ FG+T++LRS T G
Sbjct: 649 VEATVPTEFQGNVVTSLTQRNALITTTDSTEGYATVICEA--PLSDMFGYTSELRSLTEG 706
Query: 336 Q 334
+
Sbjct: 707 K 707
>AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical
protein T24A6.11 protein.
Length = 359
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 59 LLSHLRVCFNMMRNMCC*K*TCVKRFPYRYVFLICFNYVV 178
+L+ LR+C+ C + TC K FP ++V L+ ++VV
Sbjct: 290 ILTPLRICYTSCLFQHC-QITCQKNFPTKFVDLLSLSHVV 328
>U70844-3|AAB09093.2| 209|Caenorhabditis elegans Hypothetical
protein ZK154.1 protein.
Length = 209
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 523 YLCEIQCP*SSCGWYLRCTEQTSWSRFRRVPGGRYTYV 410
Y C +QC W +C E TS+S FR GR T+V
Sbjct: 42 YTCAVQCE-----WRKQCNEHTSFSTFR----GRRTFV 70
>AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical
protein F02E11.1 protein.
Length = 567
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 292 REDLPMVEYALREGLSAGVGTQIGSKTERLID 387
+ED+ +EY + E ++ +GTQ+ KT +D
Sbjct: 232 QEDVTRIEYLIHEYQNSDIGTQMLKKTRTAVD 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,154,026
Number of Sequences: 27780
Number of extensions: 378405
Number of successful extensions: 915
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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