Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_M02
         (794 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8II50 Cluster: Putative uncharacterized protein; n=1; ...    33   8.3  
UniRef50_Q4YAY8 Cluster: Putative uncharacterized protein; n=1; ...    33   8.3  

>UniRef50_Q8II50 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 1701

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = -3

Query: 633  NSLLFSIFHIIAHMIIWKEKNIYIFVSXHFF*SSLKSQRFYRSFTSIYTFYTQKFHFY 460
            N   FS  HI     +WK    +I V+ HF  + L++   Y +F  +   YT K+ +Y
Sbjct: 1320 NYYYFSKLHICLFKNVWKFLICHIQVN-HFIKNILENDIRYNTFEKLIDIYTHKYFYY 1376


>UniRef50_Q4YAY8 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 894

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
 Frame = -3

Query: 645 KKKRNSLLFSIFHIIAHMIIWKEKNIYIF--VSXHFF*SSLKSQ-RFYRSFTSIYTFYTQ 475
           KKK  +L+   +  I +  I KE  IYIF  ++   F S  KS   FY +   IY    +
Sbjct: 12  KKKNFNLILKSYKEIVNNKIIKEGKIYIFNNLNIPIFVSPDKSNYLFYINKKYIYFKENK 71

Query: 474 KFHFYPPKF 448
            F+FY PKF
Sbjct: 72  YFYFYFPKF 80


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 708,721,068
Number of Sequences: 1657284
Number of extensions: 14654859
Number of successful extensions: 29477
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 28401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29440
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67908372675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)