Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_L22
         (861 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   5.4  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    22   5.4  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   9.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.5  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +1

Query: 754 YSCRKCGYGT 783
           YSCR C Y T
Sbjct: 287 YSCRDCSYAT 296



 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 449 SQCYQRILS*SSPQCLFRSKLRTRRR 526
           SQ   R+L  S P C +  + ++RR+
Sbjct: 394 SQEESRVLDLSKPGCSYTGEQKSRRK 419


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +1

Query: 754 YSCRKCGYGT 783
           YSCR C Y T
Sbjct: 45  YSCRDCSYAT 54


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 12/47 (25%), Positives = 22/47 (46%)
 Frame = +3

Query: 39  NNKYNVDCKQYYSTNKYLIFTKISSYNF*DISHNSYTLKRQLLETFV 179
           ++ +  D +Q+Y T    IFT I       I  ++ T++     TF+
Sbjct: 59  SSSFEADLRQFYKTAYSAIFTVIDFSLCKAILVHAITIRSTFSWTFI 105


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = -1

Query: 84  YWCCSIVYNLHYIY 43
           ++C SI +N+H ++
Sbjct: 59  FYCVSITFNVHLLF 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,855
Number of Sequences: 336
Number of extensions: 3278
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)