Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_L20
(819 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0103 + 1082077-1082167,1083037-1085477 122 3e-28
02_04_0017 + 18937774-18937864,18938505-18940945 120 1e-27
01_06_0662 + 30987187-30987277,30987825-30990214 110 1e-24
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 101 9e-22
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 89 3e-18
03_05_0511 + 25056018-25059107 73 4e-13
02_04_0148 - 20198407-20201424 59 4e-09
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 38 0.007
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 38 0.007
05_02_0085 - 6465126-6466049 29 5.9
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 29 5.9
12_02_0873 - 23892193-23892290,23892931-23893111 28 7.8
07_01_0886 - 7356591-7356662,7357002-7357079,7357373-7357444,735... 28 7.8
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 122 bits (295), Expect = 3e-28
Identities = 56/96 (58%), Positives = 69/96 (71%)
Frame = -2
Query: 539 PVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFT 360
P L V+ PE A+GGIYGVLN++RGHVFEE Q GTP++ +KAYLPV ESFGF+
Sbjct: 723 PRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFS 782
Query: 359 ADLRSNTGGQAFPQCVFDHWQVLXWRPVRTSEQALQ 252
+ LR+ T GQAFPQCVFDHW ++ P+ S QA Q
Sbjct: 783 SQLRAATSGQAFPQCVFDHWDMMTSDPLEVSSQANQ 818
Score = 63.7 bits (148), Expect = 2e-10
Identities = 28/43 (65%), Positives = 34/43 (79%)
Frame = -1
Query: 609 HRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCX*SSCG 481
HRGGGQ+IPT RR +YA LTA+PRL+EPVYL EIQ ++ G
Sbjct: 700 HRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPENALG 742
Score = 57.6 bits (133), Expect = 1e-08
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = -3
Query: 760 LCDAQGFIPQ*IXTLCAGFQWAXKEGVMAEENLRGVRFNIYDVTLHTDAI 611
+C ++ + ++ AGFQWA KEG +AEEN+RG+ F + DV LH DAI
Sbjct: 650 MCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAI 699
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 283 DPCEPQSKPYNVVQETRKRKGLKE 212
DP E S+ +V + RKRKGLKE
Sbjct: 808 DPLEVSSQANQLVLDIRKRKGLKE 831
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 120 bits (289), Expect = 1e-27
Identities = 54/94 (57%), Positives = 67/94 (71%)
Frame = -2
Query: 539 PVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFT 360
P L V+ PE A+GGIYGVLN++RGHVFEE Q GTP++ +KAYLPV ESFGF+
Sbjct: 723 PRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFS 782
Query: 359 ADLRSNTGGQAFPQCVFDHWQVLXWRPVRTSEQA 258
+ LR+ T GQAFPQCVFDHW ++ P+ QA
Sbjct: 783 SQLRAATSGQAFPQCVFDHWDMMTSDPLEAGSQA 816
Score = 63.7 bits (148), Expect = 2e-10
Identities = 28/43 (65%), Positives = 34/43 (79%)
Frame = -1
Query: 609 HRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCX*SSCG 481
HRGGGQ+IPT RR +YA LTA+PRL+EPVYL EIQ ++ G
Sbjct: 700 HRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPENALG 742
Score = 57.6 bits (133), Expect = 1e-08
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = -3
Query: 760 LCDAQGFIPQ*IXTLCAGFQWAXKEGVMAEENLRGVRFNIYDVTLHTDAI 611
+C ++ + ++ AGFQWA KEG +AEEN+RG+ F + DV LH DAI
Sbjct: 650 MCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAI 699
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -3
Query: 283 DPCEPQSKPYNVVQETRKRKGLKE 212
DP E S+ +VQ+ RKRKGLKE
Sbjct: 808 DPLEAGSQASTLVQDIRKRKGLKE 831
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 110 bits (265), Expect = 1e-24
Identities = 52/95 (54%), Positives = 65/95 (68%)
Frame = -2
Query: 539 PVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFT 360
P L V+ PE A+GGIY VLN++RGHVFEE Q GTP++ +KAYLPV ESFGFT
Sbjct: 721 PRLLEPVYLVEIQAPENALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFT 780
Query: 359 ADLRSNTGGQAFPQCVFDHWQVLXWRPVRTSEQAL 255
+ LR+ T GQAFP VFDHW++L P+ + L
Sbjct: 781 STLRAATSGQAFPLFVFDHWEMLSVDPLEPGTRQL 815
Score = 64.5 bits (150), Expect = 1e-10
Identities = 29/43 (67%), Positives = 34/43 (79%)
Frame = -1
Query: 609 HRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCX*SSCG 481
HRGGGQIIPT RR +YA LTA+PRL+EPVYL EIQ ++ G
Sbjct: 698 HRGGGQIIPTARRVIYAAQLTAKPRLLEPVYLVEIQAPENALG 740
Score = 52.4 bits (120), Expect = 4e-07
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = -3
Query: 760 LCDAQGFIPQ*IXTLCAGFQWAXKEGVMAEENL--RGVRFNIYDVTLHTDAI 611
+C ++ + ++ AGFQWA KEG +AEEN+ RG+ F + DV LH+DAI
Sbjct: 646 MCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGRGICFEVCDVILHSDAI 697
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 101 bits (241), Expect = 9e-22
Identities = 48/109 (44%), Positives = 65/109 (59%)
Frame = -2
Query: 542 SPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGF 363
SP L V VP+ AVG +YGVLN R G + EES+ GTP+ ++ YLPV +SF F
Sbjct: 732 SPRLMEPMYQVDIQVPKTAVGNVYGVLNSRNGELVEESERTGTPLSNLRFYLPVAKSFDF 791
Query: 362 TADLRSNTGGQAFPQCVFDHWQVLXWRPVRTSEQALQRCTGNEKEERIE 216
T LR+ T GQAFPQC+F HWQ + P + +A + T K + ++
Sbjct: 792 TEKLRAETSGQAFPQCIFHHWQTMRSDPFQEGSEAAKVITDIRKRKGLK 840
Score = 59.7 bits (138), Expect = 3e-09
Identities = 28/59 (47%), Positives = 40/59 (67%)
Frame = -3
Query: 787 PNCLPEYXPLCDAQGFIPQ*IXTLCAGFQWAXKEGVMAEENLRGVRFNIYDVTLHTDAI 611
PN L + +C ++ + ++ AGFQWA KEG +AEEN+RGV F + DVTLH+D+I
Sbjct: 654 PNLLVD---MCKGVQYLSEIKDSVVAGFQWASKEGALAEENMRGVCFELCDVTLHSDSI 709
Score = 59.7 bits (138), Expect = 3e-09
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = -1
Query: 609 HRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCX*SSCG 481
HRGGGQ+IPT RR +YA LTA PRLMEP+Y +IQ ++ G
Sbjct: 710 HRGGGQLIPTARRAMYAAQLTASPRLMEPMYQVDIQVPKTAVG 752
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 89.4 bits (212), Expect = 3e-18
Identities = 42/91 (46%), Positives = 57/91 (62%)
Frame = -2
Query: 548 LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 369
+ +P L +++ P V IY VL+RRRGHV + GTP+++VKA+LPV ESF
Sbjct: 846 MANPRLMEPVYYIEIQTPIDCVSAIYTVLSRRRGHVTADVPKPGTPIYVVKAFLPVIESF 905
Query: 368 GFTADLRSNTGGQAFPQCVFDHWQVLXWRPV 276
GF DLR +T GQAF VFDHW ++ P+
Sbjct: 906 GFETDLRYHTQGQAFCLSVFDHWAIVPGDPL 936
Score = 61.3 bits (142), Expect = 9e-10
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -1
Query: 615 PSHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQ 502
P HRGGGQIIPT RR +Y+ L A PRLMEPVY EIQ
Sbjct: 824 PLHRGGGQIIPTARRVVYSAFLMANPRLMEPVYYIEIQ 861
Score = 32.7 bits (71), Expect = 0.36
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 721 TLCAGFQWAXKEGVMAEENLRGVRFNIYDVTL 626
++ GFQW +EG + +E +R V+F I + +
Sbjct: 789 SIVQGFQWGAREGPLCDEPIRNVKFKILNANI 820
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 72.5 bits (170), Expect = 4e-13
Identities = 37/100 (37%), Positives = 51/100 (51%)
Frame = -2
Query: 578 LEDACTHVC*LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIV 399
+++AC P L F + + P +G Y VL+R+R V +E GT +F V
Sbjct: 873 VKEACREAVVQNKPRLVEAMYFCELTTPTEQLGATYAVLSRKRARVLKEEMQEGTSLFTV 932
Query: 398 KAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLXWRP 279
AYLPV ES GF+ +LRS T G A V HW+ + P
Sbjct: 933 HAYLPVAESVGFSNELRSVTAGAASALLVLSHWEAIPEDP 972
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -1
Query: 597 GQIIPTTRRCLYACLLTAQPRLMEPVYLCEI 505
GQ+I + ++ +PRL+E +Y CE+
Sbjct: 867 GQVITAVKEACREAVVQNKPRLVEAMYFCEL 897
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 59.3 bits (137), Expect = 4e-09
Identities = 33/100 (33%), Positives = 45/100 (45%)
Frame = -2
Query: 578 LEDACTHVC*LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIV 399
+ +AC P L F + + P +G +Y VL R V +E GT +F V
Sbjct: 849 VREACQAAILESKPRLVEPMYFCELTTPTEQLGSMYAVLGNCRARVLKEEMQEGTSLFTV 908
Query: 398 KAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLXWRP 279
AYL V ES F+ LR+ T G A F HW+ + P
Sbjct: 909 HAYLSVAESSEFSKKLRNATAGAASALLAFSHWETVPQDP 948
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -1
Query: 597 GQIIPTTRRCLYACLLTAQPRLMEPVYLCEI 505
GQII R A +L ++PRL+EP+Y CE+
Sbjct: 843 GQIITAVREACQAAILESKPRLVEPMYFCEL 873
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = -2
Query: 512 VKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGG 333
V+ PE +G + G LN RRG V G + +V A++P+ E F + + LR T G
Sbjct: 658 VEVITPEEHLGDVIGDLNSRRGQVNSFGDKPG-GLKVVDAFVPLAEMFQYVSTLRGMTKG 716
Query: 332 QA 327
+A
Sbjct: 717 RA 718
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = -2
Query: 539 PVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFT 360
PV+ + V+ VP G + G +N+R+G + Q +V ++P+N FG++
Sbjct: 671 PVILEPVMKVELKVPTEFQGTVTGDMNKRKGIIVGNDQEGDDT--VVVCHVPLNNMFGYS 728
Query: 359 ADLRSNTGGQ 330
LRS T G+
Sbjct: 729 TALRSMTQGK 738
>05_02_0085 - 6465126-6466049
Length = 307
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -3
Query: 328 PSRSAYSTIGRSSXGDPCEPQSKPYNVVQETRKRKGLKEGLP 203
P++ S + R++ G P +P P R+R+ L+ G P
Sbjct: 6 PTKQPLSPLPRAASGSPTKPTPSPSPSPASARRRRVLRRGSP 47
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/74 (21%), Positives = 30/74 (40%)
Frame = -2
Query: 521 YIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSN 342
Y VPE +G + +L +RRG + + ++K +P G + +
Sbjct: 506 YEIAAVEVPEEYMGSVVELLGKRRGQMVDMQPSGPEGTTLLKYKIPTRGLIGLRNAVLTA 565
Query: 341 TGGQAFPQCVFDHW 300
+ G A +FD +
Sbjct: 566 SRGTAILNTIFDSY 579
>12_02_0873 - 23892193-23892290,23892931-23893111
Length = 92
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = -3
Query: 379 MSRSVLLPICVPTPADRPSRSAYSTIGRSSXGDPCEPQSK--PYNVVQETRKRKG 221
M R + LP+C P + R S + + DP P S+ P V R++ G
Sbjct: 1 MRRWIRLPLCAPCTWIQLQRRGSSAVAGGASADPAPPSSRMDPARVKTMGRRQDG 55
>07_01_0886 -
7356591-7356662,7357002-7357079,7357373-7357444,
7357511-7357600,7357669-7357783,7358509-7358639,
7358717-7358992,7360147-7360283,7360368-7360502,
7360958-7361325,7362111-7362229,7362295-7362339
Length = 545
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -3
Query: 349 VPTPADRPSRSAYSTIGRSSXGDPCEPQSKPYNVVQETRKRK 224
VP P PS S T S GD E +S+ + RKRK
Sbjct: 60 VPLPLPDPSSSRSETSAVRSEGDAAEEKSEEQRPGRRRRKRK 101
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,487,089
Number of Sequences: 37544
Number of extensions: 497292
Number of successful extensions: 1287
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1285
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -