Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_L20
(819 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 155 4e-38
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 155 4e-38
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 85 8e-17
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 85 8e-17
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 56 4e-08
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 31 1.3
AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical ... 30 2.3
U70844-3|AAB09093.2| 209|Caenorhabditis elegans Hypothetical pr... 29 5.3
AL032631-7|CAB63337.2| 855|Caenorhabditis elegans Hypothetical ... 28 7.0
AF039715-5|AAB96730.1| 391|Caenorhabditis elegans Hypothetical ... 28 7.0
AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical ... 28 7.0
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical protein
F25H5.4 protein.
Length = 852
Score = 155 bits (376), Expect = 4e-38
Identities = 74/116 (63%), Positives = 83/116 (71%)
Frame = -2
Query: 539 PVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFT 360
P L V+ PE AVGGIYGVLNRRRGHVFEESQV GTPMF+VKAYLPVNESFGFT
Sbjct: 732 PRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFT 791
Query: 359 ADLRSNTGGQAFPQCVFDHWQVLXWRPVRTSEQALQRCTGNEKEERIEGRSPRLNS 192
ADLRSNTGGQAFPQCVFDHWQVL P+ + Q K + ++ P L++
Sbjct: 792 ADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVPALDN 847
Score = 68.5 bits (160), Expect = 5e-12
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = -1
Query: 609 HRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCX*SSCG 481
HRGGGQIIPT RR YA +LTA+PRL+EPVYL EIQC ++ G
Sbjct: 709 HRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVG 751
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/37 (67%), Positives = 34/37 (91%)
Frame = -3
Query: 721 TLCAGFQWAXKEGVMAEENLRGVRFNIYDVTLHTDAI 611
++ AGFQWA +EGV+++EN+RGVRFN++DVTLH DAI
Sbjct: 672 SVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADAI 708
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 155 bits (376), Expect = 4e-38
Identities = 74/116 (63%), Positives = 83/116 (71%)
Frame = -2
Query: 539 PVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFT 360
P L V+ PE AVGGIYGVLNRRRGHVFEESQV GTPMF+VKAYLPVNESFGFT
Sbjct: 732 PRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFT 791
Query: 359 ADLRSNTGGQAFPQCVFDHWQVLXWRPVRTSEQALQRCTGNEKEERIEGRSPRLNS 192
ADLRSNTGGQAFPQCVFDHWQVL P+ + Q K + ++ P L++
Sbjct: 792 ADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVPALDN 847
Score = 68.5 bits (160), Expect = 5e-12
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = -1
Query: 609 HRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCX*SSCG 481
HRGGGQIIPT RR YA +LTA+PRL+EPVYL EIQC ++ G
Sbjct: 709 HRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVG 751
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/37 (67%), Positives = 34/37 (91%)
Frame = -3
Query: 721 TLCAGFQWAXKEGVMAEENLRGVRFNIYDVTLHTDAI 611
++ AGFQWA +EGV+++EN+RGVRFN++DVTLH DAI
Sbjct: 672 SVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADAI 708
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 84.6 bits (200), Expect = 8e-17
Identities = 39/94 (41%), Positives = 56/94 (59%)
Frame = -2
Query: 548 LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 369
+ +P L Y V+ P V +Y VL +RRGHV ++ + G+PM+ + AY+PV +SF
Sbjct: 826 MATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSF 885
Query: 368 GFTADLRSNTGGQAFPQCVFDHWQVLXWRPVRTS 267
GF DLR +T GQAF F HWQ++ P+ S
Sbjct: 886 GFETDLRIHTQGQAFCMSAFHHWQLVPGDPLDKS 919
Score = 56.0 bits (129), Expect = 3e-08
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = -1
Query: 615 PSHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEI 505
P +RGGGQ+IPT RRC Y+ L A PRLMEP Y E+
Sbjct: 804 PLYRGGGQMIPTARRCAYSAFLMATPRLMEPYYTVEV 840
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = -3
Query: 721 TLCAGFQWAXKEGVMAEENLRGVRFNIYDVTLHTDAI 611
+L GFQWA +EG + EE +R V+F + D + T+ +
Sbjct: 769 SLVQGFQWATREGPLCEEPIRQVKFKLLDAAIATEPL 805
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 84.6 bits (200), Expect = 8e-17
Identities = 39/94 (41%), Positives = 56/94 (59%)
Frame = -2
Query: 548 LLSPVLWSLYIFVKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 369
+ +P L Y V+ P V +Y VL +RRGHV ++ + G+PM+ + AY+PV +SF
Sbjct: 701 MATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSF 760
Query: 368 GFTADLRSNTGGQAFPQCVFDHWQVLXWRPVRTS 267
GF DLR +T GQAF F HWQ++ P+ S
Sbjct: 761 GFETDLRIHTQGQAFCMSAFHHWQLVPGDPLDKS 794
Score = 56.0 bits (129), Expect = 3e-08
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = -1
Query: 615 PSHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEI 505
P +RGGGQ+IPT RRC Y+ L A PRLMEP Y E+
Sbjct: 679 PLYRGGGQMIPTARRCAYSAFLMATPRLMEPYYTVEV 715
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = -3
Query: 721 TLCAGFQWAXKEGVMAEENLRGVRFNIYDVTLHTDAI 611
+L GFQWA +EG + EE +R V+F + D + T+ +
Sbjct: 644 SLVQGFQWATREGPLCEEPIRQVKFKLLDAAIATEPL 680
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 55.6 bits (128), Expect = 4e-08
Identities = 29/73 (39%), Positives = 39/73 (53%)
Frame = -2
Query: 488 AVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVF 309
A+G ++ VL++R+ V E T +F V + +PV ESF F LR T G A Q F
Sbjct: 769 ALGKVHAVLSQRKSKVLSEDINEATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQF 828
Query: 308 DHWQVLXWRPVRT 270
HWQV+ P T
Sbjct: 829 SHWQVIDEDPYWT 841
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/58 (41%), Positives = 28/58 (48%)
Frame = -2
Query: 443 VFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLXWRPVRT 270
V E T +F V + +PV ESF F LR T G A Q F HWQV+ P T
Sbjct: 595 VLSEDINEATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQFSHWQVIDEDPYWT 652
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = -2
Query: 512 VKFSVPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGG 333
V+ +VP G + L +R + G I +A P+++ FG+T++LRS T G
Sbjct: 649 VEATVPTEFQGNVVTSLTQRNALITTTDSTEGYATVICEA--PLSDMFGYTSELRSLTEG 706
Query: 332 Q 330
+
Sbjct: 707 K 707
>AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical
protein T24A6.11 protein.
Length = 359
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 54 LLSHLRVCFNMMRNMCC*K*TCVKRFPYRYVFLICFNYVV 173
+L+ LR+C+ C + TC K FP ++V L+ ++VV
Sbjct: 290 ILTPLRICYTSCLFQHC-QITCQKNFPTKFVDLLSLSHVV 328
>U70844-3|AAB09093.2| 209|Caenorhabditis elegans Hypothetical
protein ZK154.1 protein.
Length = 209
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 519 YLCEIQCX*SSCGWYLRCTEQTSWSRFRRVPGGRYTYV 406
Y C +QC W +C E TS+S FR GR T+V
Sbjct: 42 YTCAVQCE-----WRKQCNEHTSFSTFR----GRRTFV 70
>AL032631-7|CAB63337.2| 855|Caenorhabditis elegans Hypothetical
protein Y106G6H.5 protein.
Length = 855
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 178 ICPNIELSLGDLPSI-LSSFSFPVQRCRACSEVRTGLQXRTCQWSNTHCGK 327
I P+ +GD+ + +SS FP RC+ E+ G+ S THCG+
Sbjct: 615 IGPSSRYLMGDITGLSMSSNDFPTFRCQ---EINIGMATGIRAISVTHCGE 662
>AF039715-5|AAB96730.1| 391|Caenorhabditis elegans Hypothetical
protein R06A10.4 protein.
Length = 391
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Frame = +2
Query: 563 YKHLLVVGMIWPPPLWDGISMECYIID--VESNTTQILFS----HNSFLXGPLESSTQS 721
Y H++ ++ P W G + +D +E+N+ + L S + +L G S+TQS
Sbjct: 274 YTHIITANYVYYPQFWSGSELAKQFVDSLLETNSVERLSSSAAMKHEWLTGERPSTTQS 332
>AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical
protein F02E11.1 protein.
Length = 567
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 291 EDLPMVEYALREGLSAGVGTQIGSKTERLID 383
ED+ +EY + E ++ +GTQ+ KT +D
Sbjct: 233 EDVTRIEYLIHEYQNSDIGTQMLKKTRTAVD 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,021,271
Number of Sequences: 27780
Number of extensions: 424534
Number of successful extensions: 948
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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