Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_L19
(792 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 37 0.004
SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ... 37 0.004
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 34 0.027
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 30 0.44
SPBC11G11.01 |fis1||mitochondrial fission protein Fis1 |Schizosa... 29 0.58
SPAC30C2.06c |dml1||mitochondrial genome maintenance protein |Sc... 29 0.58
SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces po... 28 1.8
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 27 2.3
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 26 5.4
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 26 5.4
SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|c... 26 5.4
SPAC644.11c |||pyruvate dehydrogenase |Schizosaccharomyces pombe... 26 7.1
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 26 7.1
SPCC1259.13 |chk1|rad27|Chk1 protein kinase|Schizosaccharomyces ... 26 7.1
SPBC106.13 |||conserved eukaryotic protein|Schizosaccharomyces p... 25 9.4
SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces ... 25 9.4
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 25 9.4
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 36.7 bits (81), Expect = 0.004
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -3
Query: 427 LSIDPRNVEGLVARGALYANSGTFKKAIEDFETSTKAESKSCKCKKIFG--RNIGRTRTQ 254
L ++P+NVE LV RG + SG KAI F+ + K + K +F R + T+ Q
Sbjct: 170 LRLNPKNVEALVLRGKVMYYSGENAKAITHFQEALKLDPDCTTAKTLFKQVRKLENTKNQ 229
>SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex
subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 36.7 bits (81), Expect = 0.004
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = -3
Query: 487 GIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFETSTKAESK 308
G+ + K GR+ +A +A I+P N + G +Y +KKA++ ++ + K + K
Sbjct: 506 GMVYLKTGRNDQADFHFQRAAEINPNNSVLITCIGMIYERCKDYKKALDFYDRACKLDEK 565
Query: 307 S 305
S
Sbjct: 566 S 566
Score = 29.5 bits (63), Expect = 0.58
Identities = 11/47 (23%), Positives = 26/47 (55%)
Frame = -3
Query: 460 HSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFETSTK 320
HS+A +C+N+A+ +DP +G ++ + ++K+ F + +
Sbjct: 447 HSQALKCINRAIQLDPTFEYAYTLQGHEHSANEEYEKSKTSFRKAIR 493
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 33.9 bits (74), Expect = 0.027
Identities = 24/80 (30%), Positives = 34/80 (42%)
Frame = -3
Query: 490 EGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFETSTKAES 311
EG A + +A KA+ IDP + R A Y G F+ A+ED T +
Sbjct: 89 EGNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVEDALTCLSLDP 148
Query: 310 KSCKCKKIFGRNIGRTRTQL 251
+ FGR +GR + L
Sbjct: 149 HHARA---FGR-LGRAKLSL 164
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 29.9 bits (64), Expect = 0.44
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -1
Query: 288 YLGETLVALGRSYED-ENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEP 112
Y+ E LG YE NQI++A AY+ + P + + L L+ ++
Sbjct: 650 YISEVWYDLGTLYESCHNQISDALDAYQRAAELDPTNPHIKARLQLLRGPNNEQHKIVNA 709
Query: 111 AELLLPGLTGAK 76
+P + AK
Sbjct: 710 PPSNVPNVQTAK 721
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -1
Query: 264 LGRSYEDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTAS 130
+G YE + A++AYE LA P H + L +L + ++S
Sbjct: 518 IGHVYEQRKEYKLAKEAYERVLAETPNHAKVLQQLGWLCHQQSSS 562
>SPBC11G11.01 |fis1||mitochondrial fission protein Fis1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 29.5 bits (63), Expect = 0.58
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 484 IEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALY 374
+ H+K ++ E+ + LN LS DP + E L + LY
Sbjct: 86 LSHYKLKQYEESRRYLNMLLSKDPNSPEALKLKNRLY 122
>SPAC30C2.06c |dml1||mitochondrial genome maintenance protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 465
Score = 29.5 bits (63), Expect = 0.58
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 12/101 (11%)
Frame = -3
Query: 568 GRFASSEYA----DELRQAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVE 401
G FAS EY DEL + + W + + E I+ + F LN+ALS+ N
Sbjct: 215 GGFAS-EYMKVVQDELGECRVPTWVY-GIREPIQSDSSATIDNHFGKLNEALSLSQLNGS 272
Query: 400 G-------LVARGA-LYANSGTFKKAIEDFETSTKAESKSC 302
+++G L+A+S AIE F T+ SC
Sbjct: 273 CSQYFPLCTISQGDDLWASSAKINLAIESFTLPTRVYGSSC 313
>SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 949
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -1
Query: 249 EDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEPAELL 100
EDEN K EDC A + F + SL ++S T + L + +LL
Sbjct: 684 EDENHRVHHVKVSEDCTATVSF---GKQSLHIVRSSVTLLETLDDYGKLL 730
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 27.5 bits (58), Expect = 2.3
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = -1
Query: 255 SYEDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEPAELLLPGLT-GA 79
+Y+DEN + + D I E S+ F KSKT+ + I A + G GA
Sbjct: 889 NYDDENSLNRGGTSESDSEFIWDVDESNSGSIVFPKSKTSINLNNINSASASIMGSRFGA 948
Query: 78 KSYEMKEXP 52
M + P
Sbjct: 949 ADIFMSKRP 957
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 5.4
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = -1
Query: 267 ALGRSYEDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEPAELLL 97
AL Y + + K Y++ LAI P +E +L+++ +PL + LL
Sbjct: 81 ALAIVYRETKDYNNSLKCYQNALAISPNNESLWYDAAYLQAQLGLYQPLFDNWNRLL 137
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -1
Query: 339 ILRPQLKLNPNHANARKYLGETLVALGRSYEDENQITEAQK 217
+L +K NP H A K+LG LG + EA K
Sbjct: 316 LLEQSVKENPQHFEAWKWLGRIHTLLGNESRVVEALLEAVK 356
>SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 577
Score = 26.2 bits (55), Expect = 5.4
Identities = 17/79 (21%), Positives = 34/79 (43%)
Frame = -3
Query: 472 KAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFETSTKAESKSCKCK 293
K+G++S+A + + ++ RN G + G L G KKA + + + K +
Sbjct: 53 KSGQYSQAELDAKRMIHLNARNARGYLRLGKLLQLDGFDKKADQLYTQGLRMVHKMDPLR 112
Query: 292 KIFGRNIGRTRTQL*RREP 236
+ + R ++ R P
Sbjct: 113 PVLKKVSQRLNERILRTRP 131
>SPAC644.11c |||pyruvate dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 25.8 bits (54), Expect = 7.1
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 335 KIFYGLFECSTIGVQCSSSNKTLYISRIYAQSFIQALK 448
++ YGLFE I + C S + +Y+ + + LK
Sbjct: 262 RLAYGLFEAPEIQIICDPSLEMMYVESHLNHAVFEILK 299
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 7.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 213 YEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEPAEL 103
+ED + E SLD LK+KT+ P++ EL
Sbjct: 445 WEDARYFSKENRELLRSLDSLKAKTSKKDPIVRRNEL 481
>SPCC1259.13 |chk1|rad27|Chk1 protein kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 496
Score = 25.8 bits (54), Expect = 7.1
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -1
Query: 189 PFHEEAQNSLDFLKSKTTASKPLIEPAELLLPG 91
P+ E N+ D+L K +P P LL PG
Sbjct: 212 PWDEAISNTGDYLLYKKQCERPSYHPWNLLSPG 244
>SPBC106.13 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 404
Score = 25.4 bits (53), Expect = 9.4
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +3
Query: 297 HLHDLDSALVEVSKSSMAFLN 359
HLHD ++ ++ +KS + F+N
Sbjct: 79 HLHDCEALFIKQTKSRLLFMN 99
>SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 580
Score = 25.4 bits (53), Expect = 9.4
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 193 DS*AIFISFLCFCYLVLVFI 252
D+ A F S+LCF +V+VFI
Sbjct: 511 DAGAFFQSYLCFPVVVIVFI 530
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 25.4 bits (53), Expect = 9.4
Identities = 23/114 (20%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Frame = -3
Query: 586 NFSYLRGRFASS--EYADELRQAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDP 413
N + G FA++ EY + ++A + F + A + K +E + NKA+ +DP
Sbjct: 407 NELFKSGDFANAIKEYTEMTKRAPSDPRGFGNRAAA--YLKVMAPAECIRDCNKAIELDP 464
Query: 412 RNVEGLVARGALYANSGTFKKAIEDFETSTKAESKSCKCKKIFGRNIGRTRTQL 251
+ V + + K I+ +++ + + G+N+ +QL
Sbjct: 465 NFAKAYVRKAQALFMLKDYNKCIDACNEASEVDRREPNT----GKNLREIESQL 514
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,923,533
Number of Sequences: 5004
Number of extensions: 59315
Number of successful extensions: 207
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 385381248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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