Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_L17
         (849 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      28   0.41 
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   2.2  
AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenin...    24   6.7  

>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 27.9 bits (59), Expect = 0.41
 Identities = 17/53 (32%), Positives = 23/53 (43%)
 Frame = -3

Query: 250 WMRPSGMSRAVKRRRCLVAAWAALVWDRTRQWLITLLITDYDHLKSLASALSR 92
           W R + + + V  R   +  + A     T  W   LLITDY  L SL   L +
Sbjct: 296 WFRETEIYQTVLMRNENILGFIAADIKGTGSWTQMLLITDYHELGSLHDYLQK 348


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 416 GVRSRPGLHCLPADEGWPQRLGPLPLQ 496
           GVR  PG   LP ++G     GP+ LQ
Sbjct: 118 GVRGFPGSEGLPGEKGTKGEPGPVGLQ 144


>AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenine
           transaminase protein.
          Length = 396

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
 Frame = +1

Query: 556 MSTAPPPATTASFLIVLRTIMM----ASCRERSVSSKT 657
           M   PPPA+  + LI+   IMM    ++C +R +++ T
Sbjct: 1   MKFTPPPASLRNPLIIPEKIMMGPGPSNCSKRVLTAMT 38


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,146
Number of Sequences: 2352
Number of extensions: 16008
Number of successful extensions: 74
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 74
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)