Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_L12
         (869 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0124 - 938612-940098,940643-940748                               33   0.39 
12_02_0704 - 22293955-22294255,22294276-22294602,22294794-222948...    30   2.8  
09_04_0489 - 18031187-18031579,18032033-18034030,18034102-180342...    28   8.5  

>07_01_0124 - 938612-940098,940643-940748
          Length = 530

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = -2

Query: 322 INMLAKNKYV-YYSFGRFKCGVCDADIEEGENAKRHVLSPKHRENMGATYINEDASAVE* 146
           +N+L K  Y  YY+  RF+C V +AD  +      HV+  K        +      ++E 
Sbjct: 90  LNILRKEMYRGYYTLDRFRCHVHEADHTKDHEVSNHVIPSKFNPAKRIRFCRVSGKSLEE 149

Query: 145 DAKQI 131
             +Q+
Sbjct: 150 QLQQV 154


>12_02_0704 -
           22293955-22294255,22294276-22294602,22294794-22294840,
           22297252-22297316,22297439-22297541
          Length = 280

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 19/53 (35%), Positives = 23/53 (43%)
 Frame = -1

Query: 194 EYGCHIHQ*GXXXXXXXX*TNSVEVINKRLSFFFLFIIYNM*RRNHRRFTCFK 36
           EY   +HQ               E I K LS F L  +++   RNHRR TC K
Sbjct: 184 EYNSALHQICINLSLSGKVVTDKEKIEKTLSTFHLSAMHST--RNHRRMTCKK 234


>09_04_0489 -
           18031187-18031579,18032033-18034030,18034102-18034234,
           18035360-18036108
          Length = 1090

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -2

Query: 631 KCVYCNFDFRDNREAVKHALSNVYHQSAVAETKLN 527
           +C  CN  F+D    V+H LS  +HQ      K+N
Sbjct: 342 ECQKCNLTFQDQSAYVQHQLS--FHQRKAKRRKVN 374


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,730,210
Number of Sequences: 37544
Number of extensions: 407323
Number of successful extensions: 1000
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)