Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_L12
(869 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical pr... 37 0.016
Z70780-6|CAA94823.1| 614|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical pr... 32 0.46
U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger pro... 32 0.46
Z92973-3|CAB07491.1| 244|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical pr... 31 1.1
L17337-4|ABM74561.1| 217|Caenorhabditis elegans Hypothetical pr... 30 2.5
AC006833-10|AAU87800.1| 262|Caenorhabditis elegans Enhancer of ... 30 2.5
AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical ... 30 2.5
Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical p... 29 3.3
AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical ... 29 3.3
AC006833-12|AAF60942.1| 218|Caenorhabditis elegans Enhancer of ... 29 3.3
AC006833-11|AAU87801.1| 175|Caenorhabditis elegans Enhancer of ... 29 3.3
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 29 4.3
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 29 4.3
AC006625-13|ABI18147.1| 273|Caenorhabditis elegans Abnormal che... 29 4.3
AC006625-12|AAK68272.2| 214|Caenorhabditis elegans Abnormal che... 29 4.3
S66936-1|AAB28820.1| 360|Caenorhabditis elegans Egl-43 protein. 29 5.7
S66757-1|AAB28819.1| 581|Caenorhabditis elegans Egl-43 protein. 29 5.7
U23454-9|AAC46522.2| 249|Caenorhabditis elegans Hypothetical pr... 28 7.5
AL132949-18|CAB70109.2| 725|Caenorhabditis elegans Hypothetical... 28 7.5
Z92786-1|CAB07203.1| 250|Caenorhabditis elegans Hypothetical pr... 28 10.0
Z81054-10|CAB02882.3| 561|Caenorhabditis elegans Hypothetical p... 28 10.0
Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical pr... 28 10.0
U50135-5|AAN63430.2| 346|Caenorhabditis elegans Hypothetical pr... 28 10.0
AL110479-29|CAB60311.2| 1044|Caenorhabditis elegans Hypothetical... 28 10.0
AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc ... 28 10.0
>Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical
protein F25D7.3 protein.
Length = 817
Score = 37.1 bits (82), Expect = 0.016
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Frame = -2
Query: 487 NYILHSEGAS--FTCVNCNGVFNSIRSLLMHLVHAEHFAYRP-PAECTFRYYLELKHNIN 317
NY+ E + C +CN F + +L +H+ H RP E + + +L H
Sbjct: 496 NYVQQQENGKTRYACKDCNKTFGQLSNLKVHV--RTHTGERPFKCEICTKEFTQLAH--- 550
Query: 316 MLAKNKYVYYSFGRFKCGVCDADIEEGENAKRHV 215
L K+ V+ +C +CD N K H+
Sbjct: 551 -LQKHHLVHTGERPHRCDICDKRFSSTSNLKTHL 583
>Z70780-6|CAA94823.1| 614|Caenorhabditis elegans Hypothetical
protein F46B6.7 protein.
Length = 614
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Frame = -2
Query: 634 LKCVYCNFDFRDNREAVKHALSNVYHQSAVAETKLNANRADIISVYMKGNYILHSEGASF 455
L+C++C ++ R NR + H L ++H LN D ++ YI H +
Sbjct: 305 LQCIFCRYNARGNRSKIIHHLYMIHH--------LNLGSPD--NLVFVTEYIEHLKEKLH 354
Query: 454 --TCVNCNGVFNSIRSLLMHLVHAEHFAYRPPAECTFRYYL 338
C+ C +F +L+ H+ H P ++Y+
Sbjct: 355 RNECIYCEKIFPDRNTLMDHMRKRNHREVNPKNHYYDKFYI 395
>Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical
protein F45B8.4 protein.
Length = 336
Score = 32.3 bits (70), Expect = 0.46
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
Frame = -2
Query: 478 LHSEGASFTCVNCNGVFNSIRSLLMHL-VHAEHFAYRPPAECTFRYYLELKHNINMLAKN 302
+H F C C F +L HL +H++ Y P C R+ H + + K+
Sbjct: 147 VHVSDKQFECKQCGKTFKRSSTLSTHLLIHSDTRPY-PCEYCGKRF-----HQKSDMKKH 200
Query: 301 KYVYYSFGRFKCGVCDADIEEGENAKRH 218
Y++ KC VC + N H
Sbjct: 201 TYIHTGEKPHKCTVCGKAFSQSSNLITH 228
>U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger
protein PAG-3 protein.
Length = 336
Score = 32.3 bits (70), Expect = 0.46
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
Frame = -2
Query: 478 LHSEGASFTCVNCNGVFNSIRSLLMHL-VHAEHFAYRPPAECTFRYYLELKHNINMLAKN 302
+H F C C F +L HL +H++ Y P C R+ H + + K+
Sbjct: 147 VHVSDKQFECKQCGKTFKRSSTLSTHLLIHSDTRPY-PCEYCGKRF-----HQKSDMKKH 200
Query: 301 KYVYYSFGRFKCGVCDADIEEGENAKRH 218
Y++ KC VC + N H
Sbjct: 201 TYIHTGEKPHKCTVCGKAFSQSSNLITH 228
>Z92973-3|CAB07491.1| 244|Caenorhabditis elegans Hypothetical
protein Y6G8.3 protein.
Length = 244
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = -2
Query: 628 CVYCNFDFRDNREAVKHA--LSNVYHQSAVAETKLNANRADIISVYMKGNYILHSEGASF 455
C C F+ N +H L H + + KLNA + I +M+ + L F
Sbjct: 27 CASCGQHFQHNASLNRHRRLLHGNEHTCMMCDRKLNAK--ETIRDHMRNEHNLFQV---F 81
Query: 454 TCVNCNGVFNSIRSLLMH 401
TC CN F+S R L H
Sbjct: 82 TCGCCNWSFSSKRQLSEH 99
>Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical
protein F35H8.3 protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.1
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Frame = -2
Query: 502 VYMKGNYILHSEGASFTCVNCNGVFNSIRSLLMHLVHAEHFAYRPPAECTF--RYYLELK 329
VY + +H + F C NC F + S+ HL +H +P C + R + +L+
Sbjct: 185 VYQRHIQEVHGDARPFRCFNCGMRFANKTSMTHHL--KDHSLLKPMFSCDYCPRIFSKLE 242
Query: 328 HNINMLAKNKYVYYSFGRFKCGVCDADIEEGENAKRHVLSPKH 200
+K ++ F R C C E+A RH S H
Sbjct: 243 ------SKTRHHKMHFTRSTCQTC-MRFFTTEDALRHHQSTAH 278
>L17337-4|ABM74561.1| 217|Caenorhabditis elegans Hypothetical
protein ZK686.4 protein.
Length = 217
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 280 GRFKCGVCDADIEEGENAKRHVLSPKHRENMG 185
G F C VCD +++ N H+ H+ N+G
Sbjct: 88 GGFYCDVCDCVVKDSINFLDHINGKNHQRNIG 119
>AC006833-10|AAU87800.1| 262|Caenorhabditis elegans Enhancer of
hand mutation hnd-1protein 3, isoform a protein.
Length = 262
Score = 29.9 bits (64), Expect = 2.5
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 4/96 (4%)
Frame = -2
Query: 631 KCVYCNFDFRDNREAVKHALSNVYHQSAVAETKLNANRADIISVYMKGNYILH-SEGASF 455
KC C+ F + +H V H R + MK + + H +G +F
Sbjct: 3 KCDICHQKFSNKTNLNRH---KVMHSGKKKFECQFCRRPFFRNDRMKEHMMTHIKKGNTF 59
Query: 454 TC--VNCNGVFNSIRSLLMHLVHAEHFAY-RPPAEC 356
C CN FNS SL H V +EH PA+C
Sbjct: 60 ECPITACNSKFNSFTSLQFH-VDSEHIIRGSSPAKC 94
>AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical
protein F12E12.5 protein.
Length = 330
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = -2
Query: 631 KCVYCNFDFRDNREAVKHALSNVYHQSAVAET-KLNANRADIISVYMKGNYILHSEGASF 455
+C C F + +H +++ +S T + R D + ++ N++ E + F
Sbjct: 64 RCENCEKQFTNKPNLKRHQITHSGSKSKKCSTCQRTFFREDQLQRHLH-NHL--KERSHF 120
Query: 454 TC--VNCNGVFNSIRSLLMHLVHAEHFAYRPPAEC 356
C +NC+ F + HLV+ HF+Y A C
Sbjct: 121 DCPVLNCSMQFVFYEGVENHLVNHHHFSYSESAPC 155
>Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Frame = -2
Query: 463 ASFTCVNCNGVFNSIRSLLMH--LVHAE-HFA----YRPPAECTFRYYLELKHNINMLAK 305
A +C +C F S RSL H +H H ++ P T + ++E +HNI ++
Sbjct: 307 ARLSCKSCGKFFYSERSLSKHHRQIHMSGHVCVLCNHQMPKTVTVQEHMEKEHNIRLVFN 366
Query: 304 NKYVYYSFGRFKC 266
+ +SF +C
Sbjct: 367 CRCCNWSFATRRC 379
>AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Frame = -2
Query: 463 ASFTCVNCNGVFNSIRSLLMH--LVHAE-HFA----YRPPAECTFRYYLELKHNINMLAK 305
A +C +C F S RSL H +H H ++ P T + ++E +HNI ++
Sbjct: 307 ARLSCKSCGKFFYSERSLSKHHRQIHMSGHVCVLCNHQMPKTVTVQEHMEKEHNIRLVFN 366
Query: 304 NKYVYYSFGRFKC 266
+ +SF +C
Sbjct: 367 CRCCNWSFATRRC 379
>AC006833-12|AAF60942.1| 218|Caenorhabditis elegans Enhancer of
hand mutation hnd-1protein 3, isoform b protein.
Length = 218
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = -2
Query: 496 MKGNYILH-SEGASFTC--VNCNGVFNSIRSLLMHLVHAEHFAY-RPPAEC 356
MK + + H +G +F C CN FNS SL H V +EH PA+C
Sbjct: 1 MKEHMMTHIKKGNTFECPITACNSKFNSFTSLQFH-VDSEHIIRGSSPAKC 50
>AC006833-11|AAU87801.1| 175|Caenorhabditis elegans Enhancer of
hand mutation hnd-1protein 3, isoform c protein.
Length = 175
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = -2
Query: 496 MKGNYILH-SEGASFTC--VNCNGVFNSIRSLLMHLVHAEHFAY-RPPAEC 356
MK + + H +G +F C CN FNS SL H V +EH PA+C
Sbjct: 1 MKEHMMTHIKKGNTFECPITACNSKFNSFTSLQFH-VDSEHIIRGSSPAKC 50
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -1
Query: 551 RRRGDEAEREQSGYHKRLHEGKLHLAQRRSVL 456
RRR ++AERE+S +LH+ +L L R+ L
Sbjct: 243 RRRLEDAERERSQLQSQLHQVQLELDSVRTAL 274
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -1
Query: 551 RRRGDEAEREQSGYHKRLHEGKLHLAQRRSVL 456
RRR ++AERE+S +LH+ +L L R+ L
Sbjct: 243 RRRLEDAERERSQLQSQLHQVQLELDSVRTAL 274
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -1
Query: 551 RRRGDEAEREQSGYHKRLHEGKLHLAQRRSVL 456
RRR ++AERE+S +LH+ +L L R+ L
Sbjct: 259 RRRLEDAERERSQLQSQLHQVQLELDSVRTAL 290
>AC006625-13|ABI18147.1| 273|Caenorhabditis elegans Abnormal
chemotaxis protein 1,isoform b protein.
Length = 273
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
Frame = -2
Query: 478 LHSEGASFTCVNCNGVFNSIRSLLMH-LVHAEHFAYRPPAECTFRYYLELKHNINMLAKN 302
+H+ F C CN F+ SL+ H H Y P A+C + + + L K+
Sbjct: 187 IHTGEKPFMCPVCNRPFSQSSSLVTHRRTHTGERPY-PCAQCEKAF-----TDSSTLTKH 240
Query: 301 KYVYYSFGRFKCGVCDADIEEGENAKRHVLSPK 203
+ + C +C + N RH+ + K
Sbjct: 241 LRTHTGHKPYVCSICMMKFTQSGNLHRHMKTHK 273
>AC006625-12|AAK68272.2| 214|Caenorhabditis elegans Abnormal
chemotaxis protein 1,isoform a protein.
Length = 214
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
Frame = -2
Query: 478 LHSEGASFTCVNCNGVFNSIRSLLMH-LVHAEHFAYRPPAECTFRYYLELKHNINMLAKN 302
+H+ F C CN F+ SL+ H H Y P A+C + + + L K+
Sbjct: 128 IHTGEKPFMCPVCNRPFSQSSSLVTHRRTHTGERPY-PCAQCEKAF-----TDSSTLTKH 181
Query: 301 KYVYYSFGRFKCGVCDADIEEGENAKRHVLSPK 203
+ + C +C + N RH+ + K
Sbjct: 182 LRTHTGHKPYVCSICMMKFTQSGNLHRHMKTHK 214
>S66936-1|AAB28820.1| 360|Caenorhabditis elegans Egl-43 protein.
Length = 360
Score = 28.7 bits (61), Expect = 5.7
Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 8/93 (8%)
Frame = -2
Query: 631 KCVYCNFDFRDNREAVKHALSNVYHQSAVAETKLNANRADII--------SVYMKGNYIL 476
KC YC F + +H + N++++ + T N +R + + + +L
Sbjct: 252 KCQYCERSFSISSNLQRH-VRNIHNKPNTSLTPHNHHRQRSLHNSTSTSTTTTTVHHPLL 310
Query: 475 HSEGASFTCVNCNGVFNSIRSLLMHLVHAEHFA 377
H G SF C C F +L HL E A
Sbjct: 311 HLPGTSFRCQKCERCFGQQTNLDRHLKKHEQAA 343
>S66757-1|AAB28819.1| 581|Caenorhabditis elegans Egl-43 protein.
Length = 581
Score = 28.7 bits (61), Expect = 5.7
Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 8/93 (8%)
Frame = -2
Query: 631 KCVYCNFDFRDNREAVKHALSNVYHQSAVAETKLNANRADII--------SVYMKGNYIL 476
KC YC F + +H + N++++ + T N +R + + + +L
Sbjct: 473 KCQYCERSFSISSNLQRH-VRNIHNKPNTSLTPHNHHRQRSLHNSTSTSTTTTTVHHPLL 531
Query: 475 HSEGASFTCVNCNGVFNSIRSLLMHLVHAEHFA 377
H G SF C C F +L HL E A
Sbjct: 532 HLPGTSFRCQKCERCFGQQTNLDRHLKKHEQAA 564
>U23454-9|AAC46522.2| 249|Caenorhabditis elegans Hypothetical
protein C10A4.8 protein.
Length = 249
Score = 28.3 bits (60), Expect = 7.5
Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 1/113 (0%)
Frame = -2
Query: 550 AVAETKLNANRADIISVYMKGNYILHSEGASFTCVNCNGVFNSIRSLLMHL-VHAEHFAY 374
A A+ +LN RA + KGN + C C+ F+ +L+ H +H +
Sbjct: 143 APAQKRLNNKRASYVDHSQKGNL------KKYRCDVCDKTFSRSNTLITHKRIHTGEKPF 196
Query: 373 RPPAECTFRYYLELKHNINMLAKNKYVYYSFGRFKCGVCDADIEEGENAKRHV 215
+ E R + + + L +++ + + + CG+CD N H+
Sbjct: 197 K--CEHCGRAFRQPGN----LTRHRLTHTTVKPYVCGLCDKAFNRASNLHTHM 243
>AL132949-18|CAB70109.2| 725|Caenorhabditis elegans Hypothetical
protein Y53F4B.20 protein.
Length = 725
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 485 ISLHVNAYDIRSVRVQLRLRDGALVVHIRKRMFDGLTVIPKIEV 616
IS+H N + ++ + + L V+ + K +F L +PKI++
Sbjct: 256 ISVHYNRFRVQKEQTKHLLHTATQVLALLKDIFSSLIPVPKIDI 299
>Z92786-1|CAB07203.1| 250|Caenorhabditis elegans Hypothetical
protein F47H4.1 protein.
Length = 250
Score = 27.9 bits (59), Expect = 10.0
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = -2
Query: 628 CVYCNFDFRDNREAVKHA--LSNVYHQSAVAETKLNANRADIISVYMKGNYILHSEGASF 455
C C+ +F+ + +H + + H + E LN + + I +M+ H+ F
Sbjct: 27 CSSCSQNFQHSASLNRHRQLMHSNEHTCMMCERALN--QKETIREHMRNE---HNLAQVF 81
Query: 454 TCVNCNGVFNSIRSLLMH 401
TC CN F S R L H
Sbjct: 82 TCGCCNWTFASKRQLTEH 99
>Z81054-10|CAB02882.3| 561|Caenorhabditis elegans Hypothetical
protein F01D4.3 protein.
Length = 561
Score = 27.9 bits (59), Expect = 10.0
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Frame = +2
Query: 446 DARKGRSFAVQDVISLHVNAYDIRSVRVQLRL-RDGALVVHIRKRMFDGLTVIP---KIE 613
+AR R+F ++V+ L+ A+D + + + L L + G+L H++K G TV+P K+
Sbjct: 319 EARFIRNFNHKNVVRLYGVAHDEQPLYILLELVKGGSLQDHMKKAKATG-TVVPIAEKVR 377
Query: 614 VAINAFQIFDFI 649
I A + +++
Sbjct: 378 FCIGAARGIEYL 389
>Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical
protein M04B2.1 protein.
Length = 870
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 274 FKCGVCDADIEEGENAKRHVLSPKHRENMG 185
F C +CDA ++E E +H L H++ +G
Sbjct: 713 FVCEICDASVQEKEKYLQH-LQTTHKQMVG 741
>U50135-5|AAN63430.2| 346|Caenorhabditis elegans Hypothetical
protein C52E12.6 protein.
Length = 346
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -2
Query: 682 NNEVDKXFAALNKIEDLKCVYCNFDFRDNREAVKH 578
N E+++ +K ++L C CN FR +KH
Sbjct: 217 NRELNEHVRLQHKSKELSCCVCNMVFRQLSAKIKH 251
>AL110479-29|CAB60311.2| 1044|Caenorhabditis elegans Hypothetical
protein Y105C5B.2 protein.
Length = 1044
Score = 27.9 bits (59), Expect = 10.0
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = -1
Query: 473 QRRSVLYVRQLQWRIQFDSVAFD----AFSA-RRALCLQTAGGVHLPLLSRIKTQH 321
QR+ L ++Q+ WR+ DS++FD + SA RR + TA + + S +H
Sbjct: 431 QRKEHL-IQQMPWRVPLDSISFDDNGGSLSASRRVSTISTARASYSSIFSGNVAEH 485
>AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc
finger protein protein.
Length = 870
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 274 FKCGVCDADIEEGENAKRHVLSPKHRENMG 185
F C +CDA ++E E +H L H++ +G
Sbjct: 713 FVCEICDASVQEKEKYLQH-LQTTHKQMVG 741
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,565,518
Number of Sequences: 27780
Number of extensions: 355268
Number of successful extensions: 1135
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1131
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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