Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_L11
(867 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016427-3|AAB65356.1| 730|Caenorhabditis elegans Yeast mcm (li... 66 3e-11
Z81496-7|CAB04073.1| 301|Caenorhabditis elegans Hypothetical pr... 32 0.61
Z79754-7|CAB02096.2| 387|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr... 30 1.9
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ... 30 1.9
Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z49126-1|CAA88938.2| 605|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z92817-3|CAJ43914.1| 511|Caenorhabditis elegans Hypothetical pr... 29 4.3
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr... 29 4.3
U64858-2|AAN84866.1| 1310|Caenorhabditis elegans Roller: helical... 29 4.3
U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helical... 29 4.3
U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin fam... 29 4.3
U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin fam... 29 4.3
U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin iso... 29 4.3
Z93375-4|CAB07562.2| 647|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z81039-5|CAB02770.1| 812|Caenorhabditis elegans Hypothetical pr... 29 5.7
U88174-1|ABP57823.1| 1124|Caenorhabditis elegans Tomosyn synapti... 29 5.7
AY997306-1|AAY44303.1| 1133|Caenorhabditis elegans TOM-1 isoform... 29 5.7
AY997305-1|AAY44302.1| 1128|Caenorhabditis elegans TOM-1 isoform... 29 5.7
AY912102-1|AAX89145.1| 1124|Caenorhabditis elegans tomosyn isofo... 29 5.7
AF537093-1|AAO85552.1| 387|Caenorhabditis elegans ubiquitin con... 29 5.7
Z81134-3|CAB03446.1| 991|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z98866-11|CAB11564.2| 335|Caenorhabditis elegans Hypothetical p... 28 9.9
Z92817-2|CAJ43913.1| 510|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z81502-5|CAB04108.2| 672|Caenorhabditis elegans Hypothetical pr... 28 9.9
U62896-1|AAB17868.1| 335|Caenorhabditis elegans PIE-1 protein. 28 9.9
AF016654-1|AAB66028.1| 731|Caenorhabditis elegans Hypothetical ... 28 9.9
>AF016427-3|AAB65356.1| 730|Caenorhabditis elegans Yeast mcm
(licensing factor) relatedprotein 7 protein.
Length = 730
Score = 66.1 bits (154), Expect = 3e-11
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = -3
Query: 694 LAKHIAYXHQHXTQPPSXVRAL-SMKLVRRYVALTKRKEPAVPRALAEYIVSSYVELRRE 518
LA+HI Y HQH P + L S++ +R Y++L K P V AL E IV +YVE+RR+
Sbjct: 542 LAEHITYVHQHGCHPNREKKDLISLETLREYISLCKTYTPTVDPALRERIVEAYVEMRRD 601
Query: 517 ARNARDVTFTSAR 479
AR + D TF S R
Sbjct: 602 ARYSSDPTFVSPR 614
Score = 56.0 bits (129), Expect = 3e-08
Identities = 23/80 (28%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = -2
Query: 428 SDVVEKEDVSEAIRLVEMSKQSLQHVEENVQRGITSTDRIFAIVRDLA-GSNKTVKVADV 252
S +V++ DV EA+RL++ +K SL+ + +++ + D FA++R+L N + +++
Sbjct: 632 STIVDESDVEEALRLMQFAKDSLRPEQNKIEKRMAPVDAAFAVLRELYHADNAPIAISNA 691
Query: 251 IERCVDKGFKPDQVDACIEE 192
I+RC KG + C+++
Sbjct: 692 IQRCARKGISEVALKKCLDQ 711
>Z81496-7|CAB04073.1| 301|Caenorhabditis elegans Hypothetical
protein F09C6.6 protein.
Length = 301
Score = 31.9 bits (69), Expect = 0.61
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +3
Query: 159 WFTCHTFKFSXFFDASV--HLIWFESFVDAPLD 251
W C TFKFS + D+ + HL FE+F + LD
Sbjct: 187 WKNCKTFKFSRYVDSKLFSHLFHFENFNISMLD 219
>Z79754-7|CAB02096.2| 387|Caenorhabditis elegans Hypothetical
protein F25H2.8 protein.
Length = 387
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = -2
Query: 419 VEKEDVSEAIRLVEMSKQSLQHVEENVQRGITSTDRIFAIVRDL 288
V KE + ++ ++++Q QH++ VQ IT+TDR+ +RD+
Sbjct: 185 VSKEGLDMLDKVSKINRQ--QHLDGKVQGSITATDRLMKEIRDI 226
>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = -2
Query: 311 IFAIVRDLAGSNKTVKVADVIERCVDKGFKPDQVDACIEEXRELERVASEPGADQDNVHV 132
I A+VRD + + ++ +++ DK KP+ D RE + EP D +
Sbjct: 753 IDAVVRDAPEAGRR-QLREILGLSPDK-VKPNSDDKTKTSVRERKETDGEPSEDNNTQKA 810
Query: 131 MPVRFSECPPP 99
P+ + PPP
Sbjct: 811 APIASNPPPPP 821
>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = -2
Query: 311 IFAIVRDLAGSNKTVKVADVIERCVDKGFKPDQVDACIEEXRELERVASEPGADQDNVHV 132
I A+VRD + + ++ +++ DK KP+ D RE + EP D +
Sbjct: 753 IDAVVRDAPEAGRR-QLREILGLSPDK-VKPNSDDKTKTSVRERKETDGEPSEDNNTQKA 810
Query: 131 MPVRFSECPPP 99
P+ + PPP
Sbjct: 811 APIASNPPPPP 821
>Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical
protein F25H5.5 protein.
Length = 725
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -2
Query: 296 RDLAGSNKTVKVADVIERCVDKGFKPDQVDACIEEXRELERVASEPGADQD 144
+D+ GS + E C G ++++ +EE EL+RV G D D
Sbjct: 352 QDVFGSGTLEDSETIKEICEKSGEFTEKIETVLEEKTELKRVVLSDGEDSD 402
>Z49126-1|CAA88938.2| 605|Caenorhabditis elegans Hypothetical
protein DH11.1 protein.
Length = 605
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 24 KKNHHLFKIPNSYTLIH*MNLQLVPRRRTLREADR 128
KK F N L+H N++ PRRR +RE DR
Sbjct: 447 KKLVSTFNFHNYDCLVHNSNIKSDPRRRDIRERDR 481
>Z92817-3|CAJ43914.1| 511|Caenorhabditis elegans Hypothetical
protein W08G11.3b protein.
Length = 511
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = -1
Query: 303 DSARPGRL-QQDRQSRRCHREVRR--QRIQTRSGGRLHRR 193
DS R R +DR SRR H++V R +R +TRS R + R
Sbjct: 2 DSGRRSRSGSRDRDSRRRHKKVHRHKRRSRTRSRSRSYER 41
>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical protein
H03E18.1 protein.
Length = 1147
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -2
Query: 425 DVVEKEDVSEAIRLVEMSKQSLQHVEENVQRGITST 318
D EKED+++ RLVEM K Q +E+ + IT +
Sbjct: 895 DSQEKEDINKDPRLVEMKKVEAQVLEKLAKMEITES 930
>U64858-2|AAN84866.1| 1310|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform c
protein.
Length = 1310
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/41 (24%), Positives = 17/41 (41%)
Frame = -3
Query: 292 TWPAPTRPSKSPMSSRGASTKDSNQIRWTLASKNXENLNVW 170
TW P SP++S T+ + W +A + + W
Sbjct: 608 TWKEPMSDGGSPITSYAVETRINKTAEWEIAERGLDGWKTW 648
>U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform a
protein.
Length = 2456
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/41 (24%), Positives = 17/41 (41%)
Frame = -3
Query: 292 TWPAPTRPSKSPMSSRGASTKDSNQIRWTLASKNXENLNVW 170
TW P SP++S T+ + W +A + + W
Sbjct: 1754 TWKEPMSDGGSPITSYAVETRINKTAEWEIAERGLDGWKTW 1794
>U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin family
protein 8, isoformb protein.
Length = 447
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 294 RPGRLQQDRQSRRCHREVRRQRIQTRSGGRLHRRIXRT 181
R + + +RQ + RE++RQ+ SG R RR R+
Sbjct: 371 RQNQRELERQKQEAERELKRQQENEESGNRRRRRSSRS 408
>U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin family
protein 8, isoforma protein.
Length = 466
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 294 RPGRLQQDRQSRRCHREVRRQRIQTRSGGRLHRRIXRT 181
R + + +RQ + RE++RQ+ SG R RR R+
Sbjct: 390 RQNQRELERQKQEAERELKRQQENEESGNRRRRRSSRS 427
>U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin
isoform 8 protein.
Length = 466
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 294 RPGRLQQDRQSRRCHREVRRQRIQTRSGGRLHRRIXRT 181
R + + +RQ + RE++RQ+ SG R RR R+
Sbjct: 390 RQNQRELERQKQEAERELKRQQENEESGNRRRRRSSRS 427
>Z93375-4|CAB07562.2| 647|Caenorhabditis elegans Hypothetical
protein C38C6.2 protein.
Length = 647
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 201 ASVHLIWFESFVDAPLDDIGDFDGLV 278
A + +W SF D+ D +GD DGL+
Sbjct: 137 AVAYHVWVPSFQDSDGDGVGDVDGLI 162
>Z81039-5|CAB02770.1| 812|Caenorhabditis elegans Hypothetical
protein C25D7.6 protein.
Length = 812
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -3
Query: 637 RALSMKLVRRYVALTKRKEPAVPRALAEYIVSSYVELR 524
+ L+M +R+Y+ L + +P + EYI Y ++R
Sbjct: 558 KILTMDFMRKYIHLARSVQPKLTDEATEYISEVYADIR 595
>U88174-1|ABP57823.1| 1124|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform a protein.
Length = 1124
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 615 SGATWRSPSARSPPCRARSPNTSSPHTSSYGVK 517
+G+ R S R P R NTSSP TSS ++
Sbjct: 705 NGSLSRGDSQRESPSSGRQLNTSSPSTSSQSLE 737
>AY997306-1|AAY44303.1| 1133|Caenorhabditis elegans TOM-1 isoform E
protein.
Length = 1133
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 615 SGATWRSPSARSPPCRARSPNTSSPHTSSYGVK 517
+G+ R S R P R NTSSP TSS ++
Sbjct: 705 NGSLSRGDSQRESPSSGRQLNTSSPSTSSQSLE 737
>AY997305-1|AAY44302.1| 1128|Caenorhabditis elegans TOM-1 isoform D
protein.
Length = 1128
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 615 SGATWRSPSARSPPCRARSPNTSSPHTSSYGVK 517
+G+ R S R P R NTSSP TSS ++
Sbjct: 705 NGSLSRGDSQRESPSSGRQLNTSSPSTSSQSLE 737
>AY912102-1|AAX89145.1| 1124|Caenorhabditis elegans tomosyn isoform
A protein.
Length = 1124
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 615 SGATWRSPSARSPPCRARSPNTSSPHTSSYGVK 517
+G+ R S R P R NTSSP TSS ++
Sbjct: 705 NGSLSRGDSQRESPSSGRQLNTSSPSTSSQSLE 737
>AF537093-1|AAO85552.1| 387|Caenorhabditis elegans ubiquitin
conjugating enzyme UBC-25 protein.
Length = 387
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = -2
Query: 419 VEKEDVSEAIRLVEMSKQSLQHVEENVQRGITSTDRIFAIVRDL 288
V KE + + ++++Q QH++ VQ IT++DR+ +RD+
Sbjct: 185 VSKEGLDMLDKASKINRQ--QHLDGKVQGSITASDRLMKEIRDI 226
>Z81134-3|CAB03446.1| 991|Caenorhabditis elegans Hypothetical
protein T28D6.4 protein.
Length = 991
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
Frame = -3
Query: 715 FARKIXELAKHIA-----YXHQHXTQPPSXVRALSMKLVRRY 605
FARK+ E+++ +A + ++PP+ +R+L +L+RR+
Sbjct: 51 FARKLSEVSECVASHFCSHDEPQSSEPPTVIRSLGEQLMRRF 92
>Z98866-11|CAB11564.2| 335|Caenorhabditis elegans Hypothetical
protein Y49E10.14 protein.
Length = 335
Score = 27.9 bits (59), Expect = 9.9
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Frame = -3
Query: 583 EPAVPRALAEYIVSSYVELRREARNARDVTFTSARTCSPYCASRPHSQG---SDYQTSLK 413
E VPR EY RR++R+ RD T+ S AS+ H + S+ S
Sbjct: 127 ELRVPRRRQEYYSRDPPRERRDSRSRRDDVDTTINRSSS-SASKHHDENRRPSNNHGSSN 185
Query: 412 RRTYLRQFVSWRCQSNP 362
RR F C+ P
Sbjct: 186 RRQICHNFERGNCRYGP 202
>Z92817-2|CAJ43913.1| 510|Caenorhabditis elegans Hypothetical
protein W08G11.3a protein.
Length = 510
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = -1
Query: 303 DSARPGRL-QQDRQSRRCHREVR-RQRIQTRSGGRLHRR 193
DS R R +DR SRR H++ R ++R +TRS R + R
Sbjct: 2 DSGRRSRSGSRDRDSRRRHKKHRHKRRSRTRSRSRSYER 40
>Z81502-5|CAB04108.2| 672|Caenorhabditis elegans Hypothetical
protein F14B6.5 protein.
Length = 672
Score = 27.9 bits (59), Expect = 9.9
Identities = 20/80 (25%), Positives = 35/80 (43%)
Frame = -2
Query: 425 DVVEKEDVSEAIRLVEMSKQSLQHVEENVQRGITSTDRIFAIVRDLAGSNKTVKVADVIE 246
D V + D + + K+ + +E + + G ++ I +LA + VAD
Sbjct: 558 DAVPRHDTYKTKLIARWLKEGVIPLEIDKRLGQSNAQLIDGSSYELARRRYSQLVADCDG 617
Query: 245 RCVDKGFKPDQVDACIEEXR 186
RCV +KPD ++ E R
Sbjct: 618 RCVLLDYKPDFYNSITESYR 637
>U62896-1|AAB17868.1| 335|Caenorhabditis elegans PIE-1 protein.
Length = 335
Score = 27.9 bits (59), Expect = 9.9
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Frame = -3
Query: 583 EPAVPRALAEYIVSSYVELRREARNARDVTFTSARTCSPYCASRPHSQG---SDYQTSLK 413
E VPR EY RR++R+ RD T+ S AS+ H + S+ S
Sbjct: 127 ELRVPRRRQEYYSRDPPRERRDSRSRRDDVDTTINRSSS-SASKHHDENRRPSNNHGSSN 185
Query: 412 RRTYLRQFVSWRCQSNP 362
RR F C+ P
Sbjct: 186 RRQICHNFERGNCRYGP 202
>AF016654-1|AAB66028.1| 731|Caenorhabditis elegans Hypothetical
protein C17A2.5 protein.
Length = 731
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -2
Query: 425 DVVEKEDVSEAIRLVEMSKQSLQHVEENVQRGITSTDRIFAIVRDLAGSNKTVKVADVIE 246
D V + D + + + +K+ VE N + G T+ + +LA + V D
Sbjct: 617 DAVPRHDTYKTQFIADWAKEGADLVEINKRLGQTNAQLLDGPAYELARRRNSELVKDCGG 676
Query: 245 RCVDKGFKP 219
RCV +KP
Sbjct: 677 RCVLVDYKP 685
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,857,329
Number of Sequences: 27780
Number of extensions: 296146
Number of successful extensions: 1097
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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