Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_L10
(824 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0923 + 33044283-33044433,33044826-33045242,33046209-330465... 43 3e-04
10_08_0491 - 18283404-18283482,18283590-18283658,18283767-182838... 42 5e-04
04_04_1592 - 34649484-34649547,34650118-34650186,34650325-346504... 41 0.001
02_04_0149 + 20201674-20201891,20202009-20202111,20202658-202027... 37 0.022
02_05_0420 + 28821717-28821854,28821944-28822210,28822299-288225... 32 0.028
04_04_1035 + 30283456-30283536,30284823-30285359,30285508-302865... 31 0.042
12_01_0503 - 3981603-3981730,3982858-3983023,3983057-3983139,398... 35 0.068
07_03_1765 - 29329350-29331290,29331705-29331827,29332205-29333026 35 0.068
03_01_0107 + 849489-850652,850745-850835,850926-851083,851180-85... 33 0.36
08_01_0058 + 388989-389102,389226-389337,389457-389483,389787-38... 32 0.48
09_02_0030 + 3115502-3115750,3115835-3116104,3116193-3116633,311... 31 1.5
11_01_0559 - 4406815-4406922,4408954-4409042,4409177-4409270,440... 30 1.9
04_04_0990 - 29955207-29955551,29955639-29955813,29955887-299560... 30 2.6
12_01_1029 + 10547341-10548108 29 4.5
10_08_0316 - 16688911-16689044,16689141-16689211,16689303-166893... 29 5.9
>01_06_0923 +
33044283-33044433,33044826-33045242,33046209-33046538,
33046806-33046876,33047283-33047357,33047435-33047578,
33047645-33047816,33047933-33048616,33048711-33048767,
33048850-33048956,33049485-33049610,33050221-33050295,
33050387-33050499,33050789-33050905,33051384-33051444,
33051690-33051763,33052267-33052388,33052472-33052620,
33053525-33053635,33053946-33054008,33054689-33054722,
33055253-33055375,33055971-33056033,33056130-33056196,
33056311-33056356,33056446-33056552,33056923-33056971,
33057208-33057273,33057544-33057630
Length = 1286
Score = 43.2 bits (97), Expect = 3e-04
Identities = 23/109 (21%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = -2
Query: 631 SLRYCPTGEWLAVGMENSNVEVLHAVKPDKYQLHL-HESCVLSLRFASCGKWFVSTGKDN 455
S+ + P GE+ A G ++++++ K + H + ++RF G+W V+ G+DN
Sbjct: 203 SVEFHPFGEFFASGSSDTDLKIWDIKKKGCIHTYKGHRGAIRTIRFTPDGRWVVTGGEDN 262
Query: 454 LLNAWRTPYGASIFQSKGXXXXXXXXXXXXDKYIV-TGSGDKKATVYEV 311
++ W G + K ++++ TGS D+ +++
Sbjct: 263 IVKVWDLTAGKLLHDFKFHSGQIRCIDFHPQEFLLATGSADRTVKFWDL 311
>10_08_0491 -
18283404-18283482,18283590-18283658,18283767-18283883,
18283953-18284068,18284149-18284223,18284248-18284430,
18284530-18284591,18284668-18285606,18285723-18285846,
18285917-18286060,18286151-18286225,18286359-18286382,
18287025-18287095,18287305-18287407,18287555-18287781,
18287910-18288027,18288220-18288311,18288793-18288874
Length = 899
Score = 42.3 bits (95), Expect = 5e-04
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 2/109 (1%)
Frame = -2
Query: 631 SLRYCPTGEWLAVGMENSNVEVLHAVKPDKYQLHL-HESCVLSLRFASCGKWFVSTGKDN 455
SL + P GE+ A G ++N+++ K + H + LRF G+W VS G DN
Sbjct: 111 SLDFHPFGEFFASGSSDTNMKIWDMRKKGCIHTYKGHTRRIDVLRFTPDGRWIVSGGSDN 170
Query: 454 LLNAWRTPYGASIFQSKGXXXXXXXXXXXXDKYIV-TGSGDKKATVYEV 311
+ W G + + ++++ TGS DK +++
Sbjct: 171 SVKIWDLTAGKLLHDFRNHEGPINCLDFHPHEFLLATGSADKTVKFWDL 219
>04_04_1592 -
34649484-34649547,34650118-34650186,34650325-34650444,
34650630-34650742,34650824-34650898,34651224-34651346,
34651427-34651446,34652354-34652410,34652922-34653860,
34653961-34654189,34654296-34654439,34654527-34654601,
34655363-34655433,34656103-34656205,34656407-34656633,
34656791-34656908,34657239-34657369,34657709-34657802
Length = 923
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = -2
Query: 631 SLRYCPTGEWLAVGMENSNVEVLHAVKPDKYQLHL-HESCVLSLRFASCGKWFVSTGKDN 455
S+ + P GE+ A G ++N+++ + + H V ++RF G+W VS G+DN
Sbjct: 128 SVDFHPFGEFFASGSLDTNLKIWDIRRKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDN 187
Query: 454 LLNAWRTPYGASIFQSKGXXXXXXXXXXXXDKYIV-TGSGDKKATVYEV 311
++ W G + K ++++ TGS DK +++
Sbjct: 188 VVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSSDKTVKFWDL 236
>02_04_0149 +
20201674-20201891,20202009-20202111,20202658-20202765,
20202882-20202991,20203170-20203277,20203667-20203733,
20204044-20204078,20204456-20204501,20204692-20204844
Length = 315
Score = 36.7 bits (81), Expect = 0.022
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = -2
Query: 526 HESCVLSLRFASCGKWFVSTGKDNLLNAWRTPYGASI--FQSKGXXXXXXXXXXXXDKYI 353
HE VL++RF G + +S GKD ++ W GA + ++S G K +
Sbjct: 20 HEGAVLAVRFNRDGNYCLSCGKDRIIRLWNPHTGALVKPYKSHGREVRDVNSSSDNAKLV 79
Query: 352 VTGSGDKKATVYEV 311
G GD++ ++V
Sbjct: 80 SCG-GDRQVFYWDV 92
>02_05_0420 +
28821717-28821854,28821944-28822210,28822299-28822568,
28822656-28823246,28823336-28823479
Length = 469
Score = 32.3 bits (70), Expect(2) = 0.028
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -2
Query: 583 NSNVEVLHAVKPDKYQLHLHESCVLSLRFASCGKWFVSTGKDNLLNAWRTPYGASI 416
N++V + + V YQ H E C L+++ G+ S G DNLL+ W +S+
Sbjct: 258 NNDVRIRNHVV-QTYQGHSQEVC--GLKWSGSGQQLASGGNDNLLHIWDVSMASSV 310
Score = 23.0 bits (47), Expect(2) = 0.028
Identities = 7/22 (31%), Positives = 17/22 (77%)
Frame = -2
Query: 631 SLRYCPTGEWLAVGMENSNVEV 566
S+ + P G+ +AVG+ +S++++
Sbjct: 196 SVSWAPDGQHVAVGLNSSDIQL 217
>04_04_1035 + 30283456-30283536,30284823-30285359,30285508-30286512,
30286718-30287042,30287563-30287818,30287901-30288117,
30288743-30289095,30289330-30289833,30291267-30292467,
30292614-30292970,30293258-30293495,30294083-30295125,
30295234-30296649,30296731-30296855,30297036-30297314,
30297352-30297382,30298957-30299022,30299447-30299689,
30299848-30299898,30299980-30300071,30300182-30300249,
30300515-30300600,30300720-30300824,30300994-30301127,
30302403-30302436,30302620-30302892,30303019-30303288,
30303384-30303974,30304065-30304214
Length = 3376
Score = 31.5 bits (68), Expect(2) = 0.042
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -2
Query: 583 NSNVEVLHAVKPDKYQLHLHESCVLSLRFASCGKWFVSTGKDNLLNAWRTPYGASI 416
N++V + + V YQ H E C L+++ G+ S G DNLL+ W +S+
Sbjct: 3163 NNDVRIRNHVV-QTYQGHQQEVC--GLKWSGSGQQLASGGNDNLLHIWDVSMASSM 3215
Score = 23.0 bits (47), Expect(2) = 0.042
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = -2
Query: 631 SLRYCPTGEWLAVGMENSNVEV 566
S+ + P G +AVG+ +S+V++
Sbjct: 3101 SVSWAPDGRHIAVGLNSSDVQL 3122
>12_01_0503 - 3981603-3981730,3982858-3983023,3983057-3983139,
3983250-3983301,3983497-3983654,3983756-3985617,
3986029-3986093,3986176-3986340,3986836-3986893,
3987479-3987590,3987661-3987712,3988080-3988140,
3988220-3988377,3988705-3988787,3988897-3988945,
3989122-3989185,3990225-3990317,3990410-3990543,
3991364-3991585,3991815-3991937,3992103-3992267,
3993064-3993450
Length = 1479
Score = 35.1 bits (77), Expect = 0.068
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = -2
Query: 538 QLHLHESCVLSLRFASCGKWFVSTGKDNLLNAWR 437
++ HE + S++F++ G+W S G+D+++ W+
Sbjct: 1127 EIMAHEGSIWSIKFSTDGRWLASAGEDHVVRIWQ 1160
>07_03_1765 - 29329350-29331290,29331705-29331827,29332205-29333026
Length = 961
Score = 35.1 bits (77), Expect = 0.068
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -2
Query: 538 QLHLHESCVLSLRFASCGKWFVSTGKDNLLNAW 440
++ HE + S++F++ G+W S GKD+++ W
Sbjct: 167 EIMAHEGSIWSIKFSTNGRWLASAGKDHVVCIW 199
>03_01_0107 +
849489-850652,850745-850835,850926-851083,851180-851231,
852373-852452,852540-852633,852711-853231,854087-854202,
854242-854293
Length = 775
Score = 32.7 bits (71), Expect = 0.36
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = -2
Query: 526 HESCVLSLRFASCGKWFVSTGKDNLLNAWRTPYG 425
HE +++++F+S G++ + G+D ++ WR G
Sbjct: 270 HEGAIVTMKFSSDGQYLATGGEDGVVRVWRVVEG 303
>08_01_0058 +
388989-389102,389226-389337,389457-389483,389787-389859,
389958-390061,390144-390358,390429-390528,390739-390805,
391628-391716,391810-391948,392057-392157,392921-393088,
393302-393510
Length = 505
Score = 32.3 bits (70), Expect = 0.48
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
Frame = -2
Query: 628 LRYCPTGEWLAVGMENSNVEV--LHAVKPD---KYQ--LHLHESCVLSLRFASCGKWFVS 470
LR+ P+GE LA G + + + LH+ K Q L H VL L+++ G + VS
Sbjct: 70 LRFSPSGENLASGADGGGIIIWKLHSTDDGEAWKVQKTLLFHHKDVLDLQWSQDGAFLVS 129
Query: 469 TGKDNLLNAWRTPYGASIFQSKG-XXXXXXXXXXXXDKYIVTGSGDKKATVY 317
DN W G+ + +G +YI + S D+ +Y
Sbjct: 130 ASVDNSCIVWDAIKGSVQQKLEGHLHYVQGVAWDPLGQYIASLSSDRTCRIY 181
>09_02_0030 +
3115502-3115750,3115835-3116104,3116193-3116633,
3116697-3116783,3116872-3116973,3117532-3117631,
3117791-3117807
Length = 421
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = -2
Query: 601 LAVGMENSNVEVLHAVKPDKYQLHL---HESCVLSLRFASCGKWFVSTGKDNLLNAWRTP 431
L G + N+ V + V+ + +H+ HE V LR++ G+ S G DNL++ W
Sbjct: 195 LTTGGMDGNI-VNNDVRMRSHVVHIYRGHEDEVCGLRWSGSGQQLASGGNDNLVHIWDVS 253
Query: 430 YGAS 419
+S
Sbjct: 254 MASS 257
>11_01_0559 -
4406815-4406922,4408954-4409042,4409177-4409270,
4409344-4409481,4409570-4409727,4409826-4409916,
4410003-4411637
Length = 770
Score = 30.3 bits (65), Expect = 1.9
Identities = 9/35 (25%), Positives = 22/35 (62%)
Frame = -2
Query: 544 KYQLHLHESCVLSLRFASCGKWFVSTGKDNLLNAW 440
+ ++ HE + S++F+ G++ S G+D +++ W
Sbjct: 419 RQEVRAHEGSIWSIKFSPDGRFLASGGEDRVVHVW 453
>04_04_0990 -
29955207-29955551,29955639-29955813,29955887-29956017,
29956317-29956436,29956908-29956984,29957070-29957316,
29957413-29957569,29958191-29958309,29958421-29958555,
29958636-29958921,29959009-29959211,29959732-29959881,
29960084-29960266,29960931-29961278
Length = 891
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -2
Query: 526 HESCVLSLRFASCGKWFVSTGKDNLLNAW 440
H S VL F S G FVS G D L+ W
Sbjct: 590 HTSSVLRASFLSHGTQFVSCGSDGLVKLW 618
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 526 HESCVLSLRFASCGKWFVSTGKDNLLNAW 440
H S V SL + G+ +S G+D ++N W
Sbjct: 204 HFSAVTSLALSEDGQTLLSAGRDKIVNVW 232
>12_01_1029 + 10547341-10548108
Length = 255
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/25 (48%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = -2
Query: 298 NGQTDEQYD-CASEGENVPRTLSKV 227
NG+ D+ Y C++EGE +PRT S++
Sbjct: 21 NGEDDDGYRRCSAEGEAMPRTTSRL 45
>10_08_0316 -
16688911-16689044,16689141-16689211,16689303-16689354,
16689589-16689685,16689764-16689841,16689938-16690054,
16690172-16690276,16691026-16691100,16691297-16691356,
16691454-16691549,16691838-16691954,16692142-16692260,
16692349-16692490,16694204-16694290,16694852-16694914,
16695081-16695161
Length = 497
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = -2
Query: 631 SLRYCPTGEWLAVGMENSNVEVLHAVKPDKYQ-LHL---HESCVLSLRFASCGKWFVSTG 464
SL++ P E G + V++ + Y +H H + V ++ + K+FV+
Sbjct: 238 SLKFVPRDELFVTGSADKTVKIWQGSEEGNYNCIHTLKDHTAEVEAVTVHATQKYFVTAS 297
Query: 463 KDNLLNAWRTPYGASIFQ 410
KDN + P G+ + Q
Sbjct: 298 KDNTWCFYDIPSGSCLTQ 315
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,807,019
Number of Sequences: 37544
Number of extensions: 314396
Number of successful extensions: 901
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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