Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_L10
         (824 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    24   4.9  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    24   4.9  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    24   4.9  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   6.5  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   8.6  

>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 393 DDDPFDWNMLAPYGVRHALSRLSFPVETNH 482
           D  P+ W +  P  +RH  + L+  V+ NH
Sbjct: 107 DSQPYGWQLPDPAAIRHDWATLTESVQ-NH 135


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 393 DDDPFDWNMLAPYGVRHALSRLSFPVETNH 482
           D  P+ W +  P  +RH  + L+  V+ NH
Sbjct: 83  DSQPYGWQLPDPAAIRHDWATLTESVQ-NH 111


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 393 DDDPFDWNMLAPYGVRHALSRLSFPVETNH 482
           D  P+ W +  P  +RH  + L+  V+ NH
Sbjct: 80  DSQPYGWQLPDPAAIRHDWATLTESVQ-NH 108


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = -2

Query: 265 SEGENVPRTLSKVI 224
           SE ENVP+ LSKVI
Sbjct: 663 SEIENVPQNLSKVI 676


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 8/62 (12%)
 Frame = +3

Query: 474 TNHFPQDANLSDRTHDSCKCNWYL------SGFTA--CRTSTLLFSMPTANHSPVGQYLN 629
           T    Q AN ++    S  CN Y       S  +A  CRT+T   S P  NH      + 
Sbjct: 192 TADIQQAANDTNTVEASDSCNHYTHRTKVTSDISAGPCRTNTKSSSDPVLNHDTTNTGIA 251

Query: 630 EK 635
           EK
Sbjct: 252 EK 253


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 678,376
Number of Sequences: 2352
Number of extensions: 12975
Number of successful extensions: 112
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 112
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87734433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)