Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_L07
         (795 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_04_0153 + 17745473-17745889,17746120-17746272,17747307-177475...    29   4.3  
04_03_0355 - 14834951-14835253                                         28   7.4  
03_05_0584 - 25839566-25840255                                         28   7.4  

>03_04_0153 +
           17745473-17745889,17746120-17746272,17747307-17747512,
           17747752-17747959
          Length = 327

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = +1

Query: 217 WA-NPRWKPPSTESPLYCCERMYSDGRPNGH 306
           WA  PRW+PP   +   CC    +  R  GH
Sbjct: 29  WAPRPRWRPPGAGAADSCCLLFRARARRRGH 59


>04_03_0355 - 14834951-14835253
          Length = 100

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 681 IQRGYQHNAXRVQRALRPEPLRPY 610
           + RGY     R+ + +RP+PL PY
Sbjct: 58  VSRGYCGEGCRLAKLVRPQPLTPY 81


>03_05_0584 - 25839566-25840255
          Length = 229

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = +3

Query: 609 DMVEGVPGVGRAVHGPRCAGSRAG*CPS 692
           D +    G G A  GPRC    AG CPS
Sbjct: 130 DFLPAGDGAGCAKGGPRCEADVAGQCPS 157


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,623,841
Number of Sequences: 37544
Number of extensions: 295785
Number of successful extensions: 841
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)