Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_L06
(872 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0356 + 2563773-2563898,2564031-2564131,2564375-2564498,256... 196 3e-50
09_02_0460 + 9567656-9567766,9567849-9567949,9568527-9568647,956... 194 6e-50
06_03_1276 - 28907726-28907842,28908012-28908062,28908146-289082... 107 2e-23
05_01_0128 + 866817-866859,867789-867874,868142-868231,868337-87... 35 0.074
11_04_0329 - 16442298-16443734 30 2.1
08_02_0309 - 15622877-15623710 30 2.1
02_01_0336 + 2397648-2397812,2398367-2398441,2398860-2398975,239... 30 2.1
07_03_0337 + 16918613-16919078,16921610-16921725,16922039-169222... 30 2.8
06_02_0289 + 13825103-13825510,13825651-13826112,13826189-138270... 29 3.7
02_03_0155 + 15805683-15805743,15805824-15806105,15808293-158089... 29 3.7
03_05_0662 + 26540625-26541152 29 4.9
03_02_0798 - 11321590-11321685,11321802-11321888,11321972-113220... 29 6.4
01_06_1560 + 38251268-38251471,38251567-38251672,38251992-382522... 29 6.4
04_04_0347 + 24564589-24565296 28 8.5
>02_01_0356 + 2563773-2563898,2564031-2564131,2564375-2564498,
2564592-2564651,2564762-2564829,2565520-2565562,
2566026-2566091,2566237-2566275,2566375-2566457,
2566654-2566765,2566840-2566923,2567026-2567184,
2567268-2567372,2567451-2567555,2567661-2567801,
2567920-2568024,2568111-2568335,2568762-2568875,
2568963-2569178,2569674-2569733,2569827-2569940,
2570047-2570132,2570211-2570319,2570408-2570586,
2570673-2570741,2570792-2571005
Length = 968
Score = 196 bits (477), Expect = 3e-50
Identities = 105/214 (49%), Positives = 138/214 (64%), Gaps = 2/214 (0%)
Frame = -1
Query: 752 PFAXALXSXSNPQXSVXDVXNKYSHDSDNDVATTPYSP--WTRGRRH*QRKTGDDAACAG 579
P A + SNP+ +V D ++ SHD+D DV+ + + R G +
Sbjct: 680 PLALGILCISNPKVNVMDTLSRLSHDADADVSMAAIISLGFIGAGTNNARIAGMLRNLSS 739
Query: 578 AVPTASLRCTCSWCGWRQGLCHAGKGTVTLCPAHADRRLLNQPALAGLLVVLTAFLDCKT 399
+ C QGL H GKG +TL P H+DR LL+ AL GL+ VL A LD K+
Sbjct: 740 YYYKEAAHLFCVRIA--QGLVHLGKGLLTLSPYHSDRFLLSPMALGGLVTVLHACLDMKS 797
Query: 398 IILGKSHYLLYVLATAMQPRWLVTLDENLQPLNVSVRVGQAVDVIGKAGTPKTIAGSHTH 219
ILGK HY+LY++ AMQPR L+T+DE+L+PL+V VRVGQAVDV+G+AG PKTI G TH
Sbjct: 798 TILGKYHYILYIIVLAMQPRMLLTVDEDLKPLSVPVRVGQAVDVVGQAGRPKTITGFQTH 857
Query: 218 TTPVLLSFGERAELAADEYIPLSPIMEGFVILKK 117
+TPVLL+ GERAELA ++YIPL+ ++EGFVILKK
Sbjct: 858 STPVLLAAGERAELATEKYIPLTSVLEGFVILKK 891
>09_02_0460 + 9567656-9567766,9567849-9567949,9568527-9568647,
9568733-9568792,9569022-9569089,9569469-9569535,
9569586-9569666,9570152-9570217,9570372-9570410,
9570527-9570609,9570712-9570823,9570902-9570982,
9571132-9571290,9571397-9571504,9571570-9571674,
9571765-9571905,9572007-9572147,9572205-9572426,
9573617-9573730,9573830-9574045,9574373-9574432,
9574513-9574626,9574735-9574820,9574904-9575012,
9575099-9575277,9575357-9575429
Length = 938
Score = 194 bits (474), Expect = 6e-50
Identities = 108/213 (50%), Positives = 141/213 (66%), Gaps = 2/213 (0%)
Frame = -1
Query: 752 PFAXALXSXSNPQXSVXDVXNKYSHDSDNDVATTPY-SPWTRGR-RH*QRKTGDDAACAG 579
P A L SNP+ +V D ++ SHD+D +V+ S G + R G +
Sbjct: 720 PLALGLLCISNPKVNVMDTMSRLSHDADAEVSMAAIISLGLIGAGTNNARIAGMLRNLSS 779
Query: 578 AVPTASLRCTCSWCGWRQGLCHAGKGTVTLCPAHADRRLLNQPALAGLLVVLTAFLDCKT 399
+ C QGL H GKG +TL P H+DR LL+ ALAGL+ VL A LD K+
Sbjct: 780 YYYKEAGHLFCVRIA--QGLVHLGKGLLTLSPYHSDRFLLSPIALAGLVTVLHACLDMKS 837
Query: 398 IILGKSHYLLYVLATAMQPRWLVTLDENLQPLNVSVRVGQAVDVIGKAGTPKTIAGSHTH 219
IILGK HY+LY+LA AMQPR L+T+DE+L+PL+V V VGQAVDV+G+AG PKTI G TH
Sbjct: 838 IILGKYHYMLYILALAMQPRMLLTVDEDLKPLSVPVCVGQAVDVVGQAGRPKTITGFQTH 897
Query: 218 TTPVLLSFGERAELAADEYIPLSPIMEGFVILK 120
+TPVLL+ GERAELA ++Y+PL+P++EGFVIL+
Sbjct: 898 STPVLLAAGERAELATEKYLPLTPVLEGFVILR 930
>06_03_1276 - 28907726-28907842,28908012-28908062,28908146-28908254,
28908345-28908430,28908537-28908650,28908731-28908790,
28909088-28909303,28909401-28909514,28910632-28910853,
28910946-28911050,28911136-28911276,28911368-28911472,
28911538-28911645,28911753-28911911,28912060-28912140,
28912219-28912330,28912433-28912515,28912631-28912669,
28913061-28913126,28913601-28913643,28913969-28914036,
28914264-28914323,28914409-28914529,28915167-28915267,
28915354-28915494
Length = 873
Score = 107 bits (256), Expect = 2e-23
Identities = 67/154 (43%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
Frame = -1
Query: 752 PFAXALXSXSNPQXSVXDVXNKYSHDSDNDVATTPY-SPWTRGR-RH*QRKTGDDAACAG 579
P A L SNP+ +V D ++ SHD+D +V+ S G + R G +
Sbjct: 683 PLALGLLCISNPKVNVMDTMSRLSHDADAEVSMAAIISLGLIGAGTNNARIAGMLRNLSS 742
Query: 578 AVPTASLRCTCSWCGWRQGLCHAGKGTVTLCPAHADRRLLNQPALAGLLVVLTAFLDCKT 399
+ C QGL H GKG +TL P H+DR LL+ ALAGL+ VL A LD K+
Sbjct: 743 YYYKEAGHLFCVRIA--QGLVHLGKGLLTLSPYHSDRFLLSPIALAGLVTVLHACLDMKS 800
Query: 398 IILGKSHYLLYVLATAMQPRWLVTLDENLQPLNV 297
IILGK HY+LY+L AMQPR L+T+DE+L+PL+V
Sbjct: 801 IILGKYHYMLYILTLAMQPRMLLTVDEDLKPLSV 834
>05_01_0128 +
866817-866859,867789-867874,868142-868231,868337-870214,
870606-870795,870888-871483
Length = 960
Score = 35.1 bits (77), Expect = 0.074
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = -3
Query: 345 TPLAGHPRRKSSALERQRACGTGCGCYRKSRYTEDNSRFPHSHDAGAAVLRRASR 181
TP G RRKSS E Q A G+G S + ++ +P +H G++V R+A +
Sbjct: 395 TPKIGS-RRKSSERECQLAIGSGRATDTPSSFEDNLPIYPPNHSVGSSVCRKAKK 448
>11_04_0329 - 16442298-16443734
Length = 478
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/65 (33%), Positives = 26/65 (40%)
Frame = -1
Query: 608 KTGDDAACAGAVPTASLRCTCSWCGWRQGLCHAGKGTVTLCPAHADRRLLNQPALAGLLV 429
KTG R T +W GL H G G V L H RR P A L+
Sbjct: 276 KTGAMEEATAVFDRMPERQTATWNALITGLAHHGHGEVALATFHRMRRDGVPPNGATLVG 335
Query: 428 VLTAF 414
VL+A+
Sbjct: 336 VLSAY 340
>08_02_0309 - 15622877-15623710
Length = 277
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Frame = -3
Query: 285 GTGCGCYRKSRYTEDNSRFPHS------HDAGAAVLRRASRTGG*R 166
G GC + R TED + PH+ +DA A + RAS GG R
Sbjct: 91 GEGCAARLRGRLTEDCFQLPHATCAVYPYDAEARAVDRASPVGGAR 136
>02_01_0336 +
2397648-2397812,2398367-2398441,2398860-2398975,
2399155-2399269,2399360-2399488,2399809-2399856,
2400369-2400448,2400628-2400824,2400916-2401202,
2401281-2401307,2401353-2401538,2401633-2402094,
2402201-2402350,2402612-2402687,2402851-2402978,
2403244-2403435,2403559-2403690,2403767-2403889,
2404128-2404346,2404518-2404679
Length = 1022
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 692 NKYSHDSDNDVATTPYSPWTRGRRH 618
N+ SH +DND +T P +R RRH
Sbjct: 568 NRLSHAADNDTSTVKDMPSSRSRRH 592
>07_03_0337 +
16918613-16919078,16921610-16921725,16922039-16922208,
16922509-16922602,16923371-16923457,16923529-16923609,
16923800-16923925,16924541-16924649,16924723-16924802,
16925401-16925529,16925605-16925705,16926075-16926208,
16926307-16926404,16926488-16926607,16927008-16927022,
16927930-16927957,16928066-16928118,16928446-16928517,
16928605-16928652,16928928-16929033,16929110-16929168,
16929792-16929887,16929942-16929959
Length = 801
Score = 29.9 bits (64), Expect = 2.8
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Frame = +3
Query: 327 GDQPAGLHRSRQYVQQVV---GFAEDY---GLAVEEGGE-HDEQAGERGLVEQAPVRVRG 485
GD+ AG RSR+ +++VV GF DY +A EGG E +GL EQ +
Sbjct: 58 GDRAAGGERSREELERVVMELGFQNDYLKSQIAAAEGGSGAAESELVKGLKEQVERLRKE 117
Query: 486 TQGHRALAGVTQ 521
+ H+ T+
Sbjct: 118 VEEHKQTQKATE 129
>06_02_0289 +
13825103-13825510,13825651-13826112,13826189-13827021,
13827104-13827274,13828025-13828076
Length = 641
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 418 AVSTTSRPASAGWLSRRRSACAGHRVTVP 504
AV TSR LS+RRS+CA VT P
Sbjct: 248 AVHPTSRAQHDASLSQRRSSCASTEVTTP 276
>02_03_0155 +
15805683-15805743,15805824-15806105,15808293-15808959,
15809440-15810490
Length = 686
Score = 29.5 bits (63), Expect = 3.7
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 10/97 (10%)
Frame = +3
Query: 192 AEGQQHRRRVSV-GTGYCLRCT--GFSDNIHSLSHTHADVQGLK-----IFVEGD--QPA 341
AE ++ RR S+ T CL+ + GF H L T QG + ++ A
Sbjct: 316 AEKKEWGRRRSIRATTMCLKSSFHGFQQQAHWLHSTPVSFQGFRPPENWVYSPNQITGSA 375
Query: 342 GLHRSRQYVQQVVGFAEDYGLAVEEGGEHDEQAGERG 452
H S Q + E+ + +EE ++ ++AG RG
Sbjct: 376 SSHGSESASQCPARYEENNVVDIEESSDNSQEAGRRG 412
>03_05_0662 + 26540625-26541152
Length = 175
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -2
Query: 370 CTYWRLRCNPAGWSPSTKIFSP*TSACVWD 281
C YW L+ P WS S + +P WD
Sbjct: 17 CKYWLLKTEPGEWSWSDQARAPGGGVAPWD 46
>03_02_0798 -
11321590-11321685,11321802-11321888,11321972-11322082,
11322169-11322515,11322570-11322612,11322669-11322749,
11323321-11323596,11325277-11325552
Length = 438
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/67 (28%), Positives = 28/67 (41%)
Frame = -3
Query: 375 LAVRIGDCDATPLAGHPRRKSSALERQRACGTGCGCYRKSRYTEDNSRFPHSHDAGAAVL 196
LA + + PL+G PRR+ +A R A CG Y ++ + R D +
Sbjct: 4 LAQHVAGLASPPLSGAPRRRPAAPTRPSA--LVCGTYALTKEERERERMCQLFDEASERC 61
Query: 195 RRASRTG 175
R A G
Sbjct: 62 RTAPMEG 68
>01_06_1560 +
38251268-38251471,38251567-38251672,38251992-38252203,
38252306-38252512,38253327-38254694
Length = 698
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = -3
Query: 396 NPRQIPLLAVR---IGDCDATPLAGHPRRKSSALERQ 295
+PRQ+ L++R IG+C +P+A P + +E +
Sbjct: 575 SPRQLEKLSIRSSPIGECSLSPVADKPEKSEVVIESE 611
>04_04_0347 + 24564589-24565296
Length = 235
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/52 (38%), Positives = 22/52 (42%)
Frame = +1
Query: 436 RPASAGWLSRRRSACAGHRVTVPLPA*HSPWRQPHHEQVHRRLAVGTAPAHA 591
+PA A A A R P P+ H HH H R A TAPAHA
Sbjct: 68 QPAQAPEWHHHAPAPAPVRDDKPSPSHH----HHHHGHHHHRHATATAPAHA 115
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,176,267
Number of Sequences: 37544
Number of extensions: 490562
Number of successful extensions: 1809
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1808
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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