Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_L04
(845 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4SEQ2 Cluster: Chromosome 3 SCAF14614, whole genome sh... 42 0.026
UniRef50_Q4S6A2 Cluster: Chromosome 9 SCAF14729, whole genome sh... 42 0.026
UniRef50_Q8N532 Cluster: TUBA1C protein; n=9; Amniota|Rep: TUBA1... 42 0.026
UniRef50_UPI00005A2266 Cluster: PREDICTED: similar to Tubulin al... 40 0.079
UniRef50_P68363 Cluster: Tubulin alpha-1B chain; n=970; Eukaryot... 40 0.079
UniRef50_UPI0000EB04B1 Cluster: UPI0000EB04B1 related cluster; n... 39 0.14
UniRef50_Q4S633 Cluster: Chromosome 9 SCAF14729, whole genome sh... 39 0.18
UniRef50_P09733 Cluster: Tubulin alpha-1 chain; n=493; Eukaryota... 37 0.55
UniRef50_UPI0000660846 Cluster: Homolog of Notothenia coriiceps ... 37 0.73
UniRef50_A7Q8W1 Cluster: Chromosome chr5 scaffold_64, whole geno... 36 1.7
UniRef50_UPI000155C428 Cluster: PREDICTED: similar to tubulin al... 35 2.2
UniRef50_Q15670 Cluster: Alpha-tubulin isotype H2-alpha; n=5; Eu... 35 2.2
UniRef50_UPI0000DC0C7D Cluster: UPI0000DC0C7D related cluster; n... 35 3.0
UniRef50_UPI0000DB78C0 Cluster: PREDICTED: similar to Tubulin al... 34 3.9
UniRef50_Q3UX10 Cluster: In vitro fertilized eggs cDNA, RIKEN fu... 34 3.9
UniRef50_UPI000156080D Cluster: PREDICTED: similar to Tubulin, a... 33 6.8
UniRef50_UPI00005A297F Cluster: PREDICTED: similar to tubulin, a... 33 6.8
UniRef50_A6RQ51 Cluster: Putative uncharacterized protein; n=1; ... 33 9.0
>UniRef50_Q4SEQ2 Cluster: Chromosome 3 SCAF14614, whole genome
shotgun sequence; n=2; Euteleostomi|Rep: Chromosome 3
SCAF14614, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 407
Score = 41.5 bits (93), Expect = 0.026
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPPTYXPXG 356
KRT + W P FK+GI+YQPPT P G
Sbjct: 295 KRTIQFVDWCPTGFKVGINYQPPTVVPGG 323
Score = 35.1 bits (77), Expect = 2.2
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -3
Query: 309 TXDIAEAWARVXHKXDLMYA 250
T IAEAWAR+ HK DLMYA
Sbjct: 338 TTAIAEAWARLDHKFDLMYA 357
>UniRef50_Q4S6A2 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=6; Euteleostomi|Rep: Chromosome 9
SCAF14729, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 416
Score = 41.5 bits (93), Expect = 0.026
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPPTYXPXG 356
KRT + W P FK+GI+YQPPT P G
Sbjct: 303 KRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
Score = 35.1 bits (77), Expect = 2.2
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -3
Query: 309 TXDIAEAWARVXHKXDLMYA 250
T IAEAWAR+ HK DLMYA
Sbjct: 346 TTAIAEAWARLDHKFDLMYA 365
>UniRef50_Q8N532 Cluster: TUBA1C protein; n=9; Amniota|Rep: TUBA1C
protein - Homo sapiens (Human)
Length = 325
Score = 41.5 bits (93), Expect = 0.026
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPPTYXPXG 356
KRT + W P FK+GI+YQPPT P G
Sbjct: 208 KRTIQFVDWCPTGFKVGINYQPPTVVPGG 236
>UniRef50_UPI00005A2266 Cluster: PREDICTED: similar to Tubulin
alpha-2 chain (Alpha-tubulin 2); n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to Tubulin alpha-2
chain (Alpha-tubulin 2) - Canis familiaris
Length = 250
Score = 39.9 bits (89), Expect = 0.079
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPPTYXPXG 356
KR+ + W P FK+GI+YQPPT P G
Sbjct: 122 KRSIQFVDWCPTGFKVGINYQPPTVVPSG 150
>UniRef50_P68363 Cluster: Tubulin alpha-1B chain; n=970;
Eukaryota|Rep: Tubulin alpha-1B chain - Homo sapiens
(Human)
Length = 451
Score = 39.9 bits (89), Expect = 0.079
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPPTYXPXG 356
KR+ + W P FK+GI+YQPPT P G
Sbjct: 338 KRSIQFVDWCPTGFKVGINYQPPTVVPGG 366
Score = 35.9 bits (79), Expect = 1.3
Identities = 34/116 (29%), Positives = 37/116 (31%)
Frame = -3
Query: 597 SXAXXTNXXXEPVYPYXVSDSRHGKXXAXCIXVQWXDRTQPSVXGXXXXQNXSVLXXFXX 418
S A TN EP D RHGK A C+ + D V F
Sbjct: 287 SVAEITNACFEPANQMVKCDPRHGKYMACCLLYR-GDVVPKDVNAAIATIKTKRSIQFVD 345
Query: 417 GXXXXSSWVYTTSHXLXCPEXXXHKVXVXXGTPFXXTXDIAEAWARVXHKXDLMYA 250
P KV T IAEAWAR+ HK DLMYA
Sbjct: 346 WCPTGFKVGINYQPPTVVPGGDLAKVQRAV-CMLSNTTAIAEAWARLDHKFDLMYA 400
>UniRef50_UPI0000EB04B1 Cluster: UPI0000EB04B1 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB04B1 UniRef100
entry - Canis familiaris
Length = 387
Score = 39.1 bits (87), Expect = 0.14
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2
Query: 451 SEXKRTXXLLXWXPXAFKLGIHYQPPTYXPXG 356
+E K T + W P F +GI+YQPPT P G
Sbjct: 275 TETKHTIQFVDWHPTGFTVGINYQPPTVVPGG 306
>UniRef50_Q4S633 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 404
Score = 38.7 bits (86), Expect = 0.18
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPPTYXPXG 356
+R+ + W P FK+GI+YQPPT P G
Sbjct: 293 RRSVQFVDWCPTGFKVGINYQPPTVVPGG 321
Score = 35.1 bits (77), Expect = 2.2
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -3
Query: 309 TXDIAEAWARVXHKXDLMYA 250
T IAEAWAR+ HK DLMYA
Sbjct: 336 TTAIAEAWARLDHKFDLMYA 355
>UniRef50_P09733 Cluster: Tubulin alpha-1 chain; n=493;
Eukaryota|Rep: Tubulin alpha-1 chain - Saccharomyces
cerevisiae (Baker's yeast)
Length = 447
Score = 37.1 bits (82), Expect = 0.55
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPPTYXP 362
K+T L+ W P FK+GI Y+PPT P
Sbjct: 339 KKTVQLVDWCPTGFKIGICYEPPTATP 365
>UniRef50_UPI0000660846 Cluster: Homolog of Notothenia coriiceps
"Alpha tubulin.; n=1; Takifugu rubripes|Rep: Homolog of
Notothenia coriiceps "Alpha tubulin. - Takifugu rubripes
Length = 306
Score = 36.7 bits (81), Expect = 0.73
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = -2
Query: 418 WXPXAFKLGIHYQPPTYXPXGXXS--QGXSV 332
W P FK+GI+YQPPT P G + QG +V
Sbjct: 217 WCPTGFKVGINYQPPTVVPGGHLAKVQGCAV 247
>UniRef50_A7Q8W1 Cluster: Chromosome chr5 scaffold_64, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_64, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 205
Score = 35.5 bits (78), Expect = 1.7
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPPTYXP 362
KR L+ W P FK GI+YQPP P
Sbjct: 87 KRIIQLVDWCPTGFKCGINYQPPIVVP 113
>UniRef50_UPI000155C428 Cluster: PREDICTED: similar to tubulin
alpha-3 chain - Chinese hamster; n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to tubulin alpha-3
chain - Chinese hamster - Ornithorhynchus anatinus
Length = 300
Score = 35.1 bits (77), Expect = 2.2
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -3
Query: 309 TXDIAEAWARVXHKXDLMYA 250
T IAEAWAR+ HK DLMYA
Sbjct: 5 TTAIAEAWARLDHKFDLMYA 24
>UniRef50_Q15670 Cluster: Alpha-tubulin isotype H2-alpha; n=5;
Euteleostomi|Rep: Alpha-tubulin isotype H2-alpha - Homo
sapiens (Human)
Length = 98
Score = 35.1 bits (77), Expect = 2.2
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -3
Query: 309 TXDIAEAWARVXHKXDLMYA 250
T IAEAWAR+ HK DLMYA
Sbjct: 29 TTAIAEAWARLDHKFDLMYA 48
>UniRef50_UPI0000DC0C7D Cluster: UPI0000DC0C7D related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0C7D UniRef100 entry -
Rattus norvegicus
Length = 366
Score = 34.7 bits (76), Expect = 3.0
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPPTYXPXG 356
K T + W P FK+GI+YQPPT G
Sbjct: 276 KCTTHFVDWCPTGFKVGINYQPPTVVHGG 304
>UniRef50_UPI0000DB78C0 Cluster: PREDICTED: similar to Tubulin
alpha-6 chain (Alpha-tubulin 6) (Alpha-tubulin isotype
M-alpha-6); n=1; Apis mellifera|Rep: PREDICTED: similar
to Tubulin alpha-6 chain (Alpha-tubulin 6)
(Alpha-tubulin isotype M-alpha-6) - Apis mellifera
Length = 542
Score = 34.3 bits (75), Expect = 3.9
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 439 RTXXLLXWXPXAFKLGIHYQPPTYXPXGXXSQ-GXSVXWDTVXXXXRHRRSL 287
++ + W P FK+GI+YQP T P G ++ +V + RHR S+
Sbjct: 340 KSIRFVTWAPTGFKVGINYQPTTTVPGGDLAKSNRTVVMISNNTAMRHRWSM 391
>UniRef50_Q3UX10 Cluster: In vitro fertilized eggs cDNA, RIKEN
full-length enriched library, clone:7420443F16
product:similar to Alpha tubulin; n=4; Murinae|Rep: In
vitro fertilized eggs cDNA, RIKEN full-length enriched
library, clone:7420443F16 product:similar to Alpha
tubulin - Mus musculus (Mouse)
Length = 446
Score = 34.3 bits (75), Expect = 3.9
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 418 WXPXAFKLGIHYQPPTYXPXG 356
W P FK+GI+YQPP P G
Sbjct: 353 WCPTGFKVGINYQPPAVVPGG 373
Score = 33.5 bits (73), Expect = 6.8
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -3
Query: 309 TXDIAEAWARVXHKXDLMYA 250
T I EAWAR+ HK DLMYA
Sbjct: 388 TTAIVEAWARLDHKFDLMYA 407
>UniRef50_UPI000156080D Cluster: PREDICTED: similar to Tubulin,
alpha 3c; n=1; Equus caballus|Rep: PREDICTED: similar to
Tubulin, alpha 3c - Equus caballus
Length = 186
Score = 33.5 bits (73), Expect = 6.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPPTYXPXG 356
K T + W AFK+ I+Y+PPT P G
Sbjct: 69 KHTIQFVDWCTTAFKVDINYRPPTVVPRG 97
>UniRef50_UPI00005A297F Cluster: PREDICTED: similar to tubulin,
alpha 1; n=2; Eutheria|Rep: PREDICTED: similar to
tubulin, alpha 1 - Canis familiaris
Length = 127
Score = 33.5 bits (73), Expect = 6.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPPTYXP 362
K T + W P FK+GI+YQ PT P
Sbjct: 37 KHTIQFVDWCPTDFKVGINYQAPTVVP 63
>UniRef50_A6RQ51 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 573
Score = 33.1 bits (72), Expect = 9.0
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPPTYXPXGXXSQG 341
K + L+ W P FKLGI+YQ P P + G
Sbjct: 327 KTSFNLVEWCPTGFKLGINYQKPMSVPSTAPNDG 360
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 361,247,642
Number of Sequences: 1657284
Number of extensions: 2888852
Number of successful extensions: 1522
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1522
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74193458591
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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