Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_L04
(845 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 42 7e-04
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 42 7e-04
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 42 7e-04
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 42 7e-04
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 42 7e-04
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 42 7e-04
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 40 0.002
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 40 0.002
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 40 0.002
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 40 0.002
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 40 0.002
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 40 0.002
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 40 0.003
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 39 0.005
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 38 0.012
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 34 0.15
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 31 0.78
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 41.5 bits (93), Expect = 7e-04
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPPTYXPXG 356
KRT + W P FK+GI+YQPPT P G
Sbjct: 336 KRTIQFVDWCPTGFKVGINYQPPTVVPGG 364
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -3
Query: 309 TXDIAEAWARVXHKXDLMYA 250
T IAEAW+R+ +K DLMYA
Sbjct: 379 TTAIAEAWSRLDYKFDLMYA 398
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 41.5 bits (93), Expect = 7e-04
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPPTYXPXG 356
KRT + W P FK+GI+YQPPT P G
Sbjct: 344 KRTVQFVEWCPTGFKVGINYQPPTVVPGG 372
Score = 35.1 bits (77), Expect = 0.063
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -3
Query: 309 TXDIAEAWARVXHKXDLMYA 250
T IAEAWAR+ HK DLMYA
Sbjct: 387 TTAIAEAWARLDHKFDLMYA 406
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 41.5 bits (93), Expect = 7e-04
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPPTYXPXG 356
KRT + W P FK+GI+YQPPT P G
Sbjct: 336 KRTIQFVDWCPTGFKVGINYQPPTVVPGG 364
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -3
Query: 309 TXDIAEAWARVXHKXDLMYA 250
T IAEAW+R+ +K DLMYA
Sbjct: 379 TTAIAEAWSRLDYKFDLMYA 398
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 41.5 bits (93), Expect = 7e-04
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPPTYXPXG 356
KRT + W P FK+GI+YQPPT P G
Sbjct: 336 KRTIQFVDWCPTGFKVGINYQPPTVVPGG 364
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -3
Query: 309 TXDIAEAWARVXHKXDLMYA 250
T IAEAW+R+ +K DLMYA
Sbjct: 379 TTAIAEAWSRLDYKFDLMYA 398
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 41.5 bits (93), Expect = 7e-04
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPPTYXPXG 356
KRT + W P FK+GI+YQPPT P G
Sbjct: 336 KRTIQFVDWCPTGFKVGINYQPPTVVPGG 364
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -3
Query: 309 TXDIAEAWARVXHKXDLMYA 250
T IAEAW+R+ +K DLMYA
Sbjct: 379 TTAIAEAWSRLDYKFDLMYA 398
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 41.5 bits (93), Expect = 7e-04
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPPTYXPXG 356
KRT + W P FK+GI+YQPPT P G
Sbjct: 316 KRTVQFVEWCPTGFKVGINYQPPTVVPGG 344
Score = 35.1 bits (77), Expect = 0.063
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -3
Query: 309 TXDIAEAWARVXHKXDLMYA 250
T IAEAWAR+ HK DLMYA
Sbjct: 359 TTAIAEAWARLDHKFDLMYA 378
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPPTYXPXG 356
KR+ + W P FK+GI+YQPPT P G
Sbjct: 336 KRSVQFVDWCPTGFKVGINYQPPTVVPGG 364
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -3
Query: 309 TXDIAEAWARVXHKXDLMYA 250
T IAEAW+R+ +K DLMYA
Sbjct: 379 TTAIAEAWSRLDYKFDLMYA 398
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPPTYXPXG 356
KR+ + W P FK+GI+YQPPT P G
Sbjct: 338 KRSIQFVDWCPTGFKVGINYQPPTVVPGG 366
Score = 35.1 bits (77), Expect = 0.063
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -3
Query: 309 TXDIAEAWARVXHKXDLMYA 250
T IAEAWAR+ HK DLMYA
Sbjct: 381 TTAIAEAWARLDHKFDLMYA 400
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPPTYXPXG 356
KR+ + W P FK+GI+YQPPT P G
Sbjct: 337 KRSIQFVDWCPTGFKVGINYQPPTVVPGG 365
Score = 35.1 bits (77), Expect = 0.063
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -3
Query: 309 TXDIAEAWARVXHKXDLMYA 250
T IAEAWAR+ HK DLMYA
Sbjct: 380 TTAIAEAWARLDHKFDLMYA 399
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPPTYXPXG 356
KR+ + W P FK+GI+YQPPT P G
Sbjct: 336 KRSVQFVDWCPTGFKVGINYQPPTVVPGG 364
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -3
Query: 309 TXDIAEAWARVXHKXDLMYA 250
T IAEAW+R+ +K DLMYA
Sbjct: 379 TTAIAEAWSRLDYKFDLMYA 398
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPPTYXPXG 356
KR+ + W P FK+GI+YQPPT P G
Sbjct: 338 KRSIQFVDWCPTGFKVGINYQPPTVVPGG 366
Score = 35.1 bits (77), Expect = 0.063
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -3
Query: 309 TXDIAEAWARVXHKXDLMYA 250
T IAEAWAR+ HK DLMYA
Sbjct: 381 TTAIAEAWARLDHKFDLMYA 400
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPPTYXPXG 356
KR+ + W P FK+GI+YQPPT P G
Sbjct: 338 KRSIQFVDWCPTGFKVGINYQPPTVVPGG 366
Score = 35.1 bits (77), Expect = 0.063
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -3
Query: 309 TXDIAEAWARVXHKXDLMYA 250
T IAEAWAR+ HK DLMYA
Sbjct: 381 TTAIAEAWARLDHKFDLMYA 400
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPPTYXPXG 356
KR + W P FK+GI+YQPPT P G
Sbjct: 338 KRAIQFVDWCPTGFKVGINYQPPTVVPGG 366
Score = 33.1 bits (72), Expect = 0.26
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -3
Query: 309 TXDIAEAWARVXHKXDLMYA 250
T I EAWAR+ HK DLMYA
Sbjct: 381 TTAIQEAWARLDHKFDLMYA 400
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPPTYXPXGXXSQ 344
KR+ + W P FK+GI+YQPPT P S+
Sbjct: 343 KRSIQFVDWCPTGFKVGINYQPPTVVPGADLSK 375
Score = 35.1 bits (77), Expect = 0.063
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -3
Query: 309 TXDIAEAWARVXHKXDLMYA 250
T IAEAWAR+ HK DLMYA
Sbjct: 386 TTAIAEAWARLDHKFDLMYA 405
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 37.5 bits (83), Expect = 0.012
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPPTYXPXG 356
+R+ + W P FK+G++YQPPT P G
Sbjct: 333 QRSVQFVDWCPTGFKVGLNYQPPTVIPGG 361
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 309 TXDIAEAWARVXHKXDLMYA 250
T IAEAW R+ +K DLMYA
Sbjct: 376 TTAIAEAWQRLDYKFDLMYA 395
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -3
Query: 309 TXDIAEAWARVXHKXDLMYA 250
T IAEAWAR+ HK DLMY+
Sbjct: 384 TTAIAEAWARLDHKFDLMYS 403
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 442 KRTXXLLXWXPXAFKLGIHYQPP 374
KR + W P FK+GI+YQ P
Sbjct: 341 KRGINFVDWCPTGFKVGINYQAP 363
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -3
Query: 309 TXDIAEAWARVXHKXDLMYA 250
T IAEAW+R+ +K DLMYA
Sbjct: 16 TTAIAEAWSRLDYKFDLMYA 35
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,229,826
Number of Sequences: 27780
Number of extensions: 65579
Number of successful extensions: 81
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 81
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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