BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_K24
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein. 26 0.68
U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe... 26 1.5
U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defe... 26 1.5
U23448-3|AAO26017.1| 612|Caenorhabditis elegans Egg laying defe... 26 1.5
L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily ass... 30 1.6
AL110485-29|CAB60376.3| 732|Caenorhabditis elegans Hypothetical... 30 1.6
Z46241-7|CAA86320.1| 214|Caenorhabditis elegans Hypothetical pr... 29 3.8
U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein ... 29 3.8
U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein ... 29 3.8
U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein. 29 3.8
U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein. 29 3.8
U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with ta... 29 3.8
U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with ta... 29 3.8
U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with ta... 29 3.8
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 3.8
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 3.8
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 3.8
Z73906-4|CAA98117.1| 508|Caenorhabditis elegans Hypothetical pr... 29 5.0
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 28 6.6
L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chrom... 28 6.6
AL023844-8|CAA19534.1| 396|Caenorhabditis elegans Hypothetical ... 28 6.6
AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacti... 28 6.6
AC024791-4|AAK95890.1| 1186|Caenorhabditis elegans Msh (muts hom... 28 6.6
U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical pr... 28 8.8
>AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.
Length = 1129
Score = 25.8 bits (54), Expect(2) = 0.68
Identities = 17/75 (22%), Positives = 33/75 (44%)
Frame = -1
Query: 419 SPFSSPPSIEQPKPRQRQHSNSEPELVPVMKKIDETPGYENIMKENQRIIKNKVSERKPE 240
SP + PP++ +S P + K++ P Y++ E + K + E +
Sbjct: 576 SPTTPPPTLTNGLTNGHGPESSTPNGETISKRMKVEPSYDDDDDEEEG--KMTIDEGDDD 633
Query: 239 PPPRALNGIETDPTL 195
P P LNG + + ++
Sbjct: 634 PMP-VLNGFKKEESV 647
Score = 24.2 bits (50), Expect(2) = 0.68
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -1
Query: 221 NGIETDPTLVSNLXEGESR--ETRSDIGSDRKEISN 120
NG+ETDPT ++ E E+ ET + + + ++ +N
Sbjct: 662 NGVETDPTTLTCSMEAENEVCETPAVVSVEIRDETN 697
>U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying
defective protein 27,isoform a protein.
Length = 1129
Score = 25.8 bits (54), Expect(2) = 1.5
Identities = 17/75 (22%), Positives = 33/75 (44%)
Frame = -1
Query: 419 SPFSSPPSIEQPKPRQRQHSNSEPELVPVMKKIDETPGYENIMKENQRIIKNKVSERKPE 240
SP + PP++ +S P + K++ P Y++ E + K + E +
Sbjct: 576 SPTTPPPTLTNGLTNGHGPESSTPNGETISKRMKVEPSYDDDDDEEEG--KMTIDEGDDD 633
Query: 239 PPPRALNGIETDPTL 195
P P LNG + + ++
Sbjct: 634 PMP-VLNGFKKEESV 647
Score = 23.0 bits (47), Expect(2) = 1.5
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -1
Query: 221 NGIETDPTLVSNLXEGESR--ETRSDIGSDRKEISN 120
NG+ETDPT + E E+ ET + + + ++ +N
Sbjct: 662 NGVETDPTTPTCSMEAENEVCETPAVVSVEIRDETN 697
>U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying
defective protein 27,isoform b protein.
Length = 1124
Score = 25.8 bits (54), Expect(2) = 1.5
Identities = 17/75 (22%), Positives = 33/75 (44%)
Frame = -1
Query: 419 SPFSSPPSIEQPKPRQRQHSNSEPELVPVMKKIDETPGYENIMKENQRIIKNKVSERKPE 240
SP + PP++ +S P + K++ P Y++ E + K + E +
Sbjct: 573 SPTTPPPTLTNGLTNGHGPESSTPNGETISKRMKVEPSYDDDDDEEEG--KMTIDEGDDD 630
Query: 239 PPPRALNGIETDPTL 195
P P LNG + + ++
Sbjct: 631 PMP-VLNGFKKEESV 644
Score = 23.0 bits (47), Expect(2) = 1.5
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -1
Query: 221 NGIETDPTLVSNLXEGESR--ETRSDIGSDRKEISN 120
NG+ETDPT + E E+ ET + + + ++ +N
Sbjct: 659 NGVETDPTTPTCSMEAENEVCETPAVVSVEIRDETN 694
>U23448-3|AAO26017.1| 612|Caenorhabditis elegans Egg laying
defective protein 27,isoform c protein.
Length = 612
Score = 25.8 bits (54), Expect(2) = 1.5
Identities = 17/75 (22%), Positives = 33/75 (44%)
Frame = -1
Query: 419 SPFSSPPSIEQPKPRQRQHSNSEPELVPVMKKIDETPGYENIMKENQRIIKNKVSERKPE 240
SP + PP++ +S P + K++ P Y++ E + K + E +
Sbjct: 61 SPTTPPPTLTNGLTNGHGPESSTPNGETISKRMKVEPSYDDDDDEEEG--KMTIDEGDDD 118
Query: 239 PPPRALNGIETDPTL 195
P P LNG + + ++
Sbjct: 119 PMP-VLNGFKKEESV 132
Score = 23.0 bits (47), Expect(2) = 1.5
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -1
Query: 221 NGIETDPTLVSNLXEGESR--ETRSDIGSDRKEISN 120
NG+ETDPT + E E+ ET + + + ++ +N
Sbjct: 147 NGVETDPTTPTCSMEAENEVCETPAVVSVEIRDETN 182
>L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform b protein.
Length = 837
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = -1
Query: 452 AIKEMQPPAILSPF---SSPPSIEQPKPRQRQHSN-SEPELVPVMKKIDETPGYENIMKE 285
++KE Q +L P S+ P + K RQ S E + + M+K ++ EN+ KE
Sbjct: 501 SLKEAQDKCLLVPLEDVSNAPPEDVNKIRQEYESLCKEVKRLGAMEKQEKQKQVENLQKE 560
Query: 284 NQRIIKNKVSE 252
R I +K+SE
Sbjct: 561 VNRQIADKLSE 571
>AL110485-29|CAB60376.3| 732|Caenorhabditis elegans Hypothetical
protein Y46G5A.10 protein.
Length = 732
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = -1
Query: 398 SIEQPKPRQ--RQHSNSEPELVPVMKKIDETPGYE--NIMKENQRI-IKNKVSERKP 243
SI++ +PR R H +SE +P + I +TP N+ +E QR ++ SER P
Sbjct: 451 SIDRSEPRHHHRHHVHSETPELPYTRGISKTPSVREYNVKREGQRSPSRSHRSERSP 507
>Z46241-7|CAA86320.1| 214|Caenorhabditis elegans Hypothetical
protein C38D4.9 protein.
Length = 214
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -1
Query: 392 EQPKPRQRQHSNSEPELVPVMKKIDETPGYE 300
E+PK + Q++ S V +M+ IDET G+E
Sbjct: 17 EKPKIKLEQYATSSELAVSMMEMIDETIGFE 47
>U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein
protein.
Length = 413
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = -1
Query: 443 EMQPPAILSPFSSPPSIEQPKPRQRQHSNSEPELVPVMKKIDETPGYENIMKENQRIIKN 264
E++P + P P +P+P EPE VP + E + KE + ++++
Sbjct: 67 EVEP--VPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEPEPEPEPEPVVEKEEEVVVES 124
Query: 263 KVSERKPE 240
E++PE
Sbjct: 125 PPREQEPE 132
>U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein
protein.
Length = 453
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = -1
Query: 443 EMQPPAILSPFSSPPSIEQPKPRQRQHSNSEPELVPVMKKIDETPGYENIMKENQRIIKN 264
E++P + P P +P+P EPE VP + E + KE + ++++
Sbjct: 67 EVEP--VPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEPEPEPEPEPVVEKEEEVVVES 124
Query: 263 KVSERKPE 240
E++PE
Sbjct: 125 PPREQEPE 132
>U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein.
Length = 436
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = -1
Query: 443 EMQPPAILSPFSSPPSIEQPKPRQRQHSNSEPELVPVMKKIDETPGYENIMKENQRIIKN 264
E++P + P P +P+P EPE VP + E + KE + ++++
Sbjct: 45 EVEP--VPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEPEPEPEPEPVVEKEEEVVVES 102
Query: 263 KVSERKPE 240
E++PE
Sbjct: 103 PPREQEPE 110
>U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein.
Length = 431
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = -1
Query: 443 EMQPPAILSPFSSPPSIEQPKPRQRQHSNSEPELVPVMKKIDETPGYENIMKENQRIIKN 264
E++P + P P +P+P EPE VP + E + KE + ++++
Sbjct: 45 EVEP--VPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEPEPEPEPEPVVEKEEEVVVES 102
Query: 263 KVSERKPE 240
E++PE
Sbjct: 103 PPREQEPE 110
>U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform a protein.
Length = 453
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = -1
Query: 443 EMQPPAILSPFSSPPSIEQPKPRQRQHSNSEPELVPVMKKIDETPGYENIMKENQRIIKN 264
E++P + P P +P+P EPE VP + E + KE + ++++
Sbjct: 67 EVEP--VPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEPEPEPEPEPVVEKEEEVVVES 124
Query: 263 KVSERKPE 240
E++PE
Sbjct: 125 PPREQEPE 132
>U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform c protein.
Length = 413
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = -1
Query: 443 EMQPPAILSPFSSPPSIEQPKPRQRQHSNSEPELVPVMKKIDETPGYENIMKENQRIIKN 264
E++P + P P +P+P EPE VP + E + KE + ++++
Sbjct: 67 EVEP--VPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEPEPEPEPEPVVEKEEEVVVES 124
Query: 263 KVSERKPE 240
E++PE
Sbjct: 125 PPREQEPE 132
>U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform b protein.
Length = 458
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = -1
Query: 443 EMQPPAILSPFSSPPSIEQPKPRQRQHSNSEPELVPVMKKIDETPGYENIMKENQRIIKN 264
E++P + P P +P+P EPE VP + E + KE + ++++
Sbjct: 67 EVEP--VPQPEPEPEYQPEPEPEPEVEPEPEPEPVPEPEPEPEPEPEPVVEKEEEVVVES 124
Query: 263 KVSERKPE 240
E++PE
Sbjct: 125 PPREQEPE 132
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = -1
Query: 410 SSPPSIE-QPKPRQRQHSNS-EPELVPVMKKIDETPGYENIMKENQRIIKNKVSERKPEP 237
+ P +E + +P++ + + E E+ +K D++ E KE ++IIK K KP+
Sbjct: 10135 TEPQQLEVKSEPKKSDKTETVEKEVASSTEKSDDSKTKEP--KEKKKIIKKKKDTTKPQE 10192
Query: 236 PPRALNGIETDPTLVSNLXEGESRETRSD 150
+ L+ E+ L S++ T SD
Sbjct: 10193 ASKELSSDESRIDLESDISLSLDTVTESD 10221
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = -1
Query: 410 SSPPSIE-QPKPRQRQHSNS-EPELVPVMKKIDETPGYENIMKENQRIIKNKVSERKPEP 237
+ P +E + +P++ + + E E+ +K D++ E KE ++IIK K KP+
Sbjct: 10155 TEPQQLEVKSEPKKSDKTETVEKEVASSTEKSDDSKTKEP--KEKKKIIKKKKDTTKPQE 10212
Query: 236 PPRALNGIETDPTLVSNLXEGESRETRSD 150
+ L+ E+ L S++ T SD
Sbjct: 10213 ASKELSSDESRIDLESDISLSLDTVTESD 10241
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = -1
Query: 410 SSPPSIE-QPKPRQRQHSNS-EPELVPVMKKIDETPGYENIMKENQRIIKNKVSERKPEP 237
+ P +E + +P++ + + E E+ +K D++ E KE ++IIK K KP+
Sbjct: 10155 TEPQQLEVKSEPKKSDKTETVEKEVASSTEKSDDSKTKEP--KEKKKIIKKKKDTTKPQE 10212
Query: 236 PPRALNGIETDPTLVSNLXEGESRETRSD 150
+ L+ E+ L S++ T SD
Sbjct: 10213 ASKELSSDESRIDLESDISLSLDTVTESD 10241
>Z73906-4|CAA98117.1| 508|Caenorhabditis elegans Hypothetical
protein D2030.3 protein.
Length = 508
Score = 28.7 bits (61), Expect = 5.0
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Frame = -1
Query: 434 PPAILSPFSSPPSIEQPKPRQRQHSNSEPELVPVM--KKIDETPGYENIMKENQRIIKNK 261
P A +EQ + + + + E E+VPV+ KKI+E P + K+N
Sbjct: 413 PTAASEDLKEKEEVEQ-EFEEMETEDKEEEIVPVVVEKKIEEVPEASSRKKKNSESSTTA 471
Query: 260 VSERKPEPPPRALNGIETDPTLVSNLXEGES 168
S + +N ++T NL EGE+
Sbjct: 472 TSTVAKKKKKSVVNDVKT------NLLEGEA 496
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = -1
Query: 437 QPPAILSPFSSPPSIEQPKPRQRQHSNSEPELVPVMKKIDETPGYENIMKENQRIIKNKV 258
+P I P P + +PKP+ + +P+L + K P + +K + KN V
Sbjct: 237 KPMPIPKPMPFPKPMPKPKPKPKPMPKPKPKL-KLKPKPMPFPKPKPKLKPKTKPKKNPV 295
Query: 257 SERKPEPPPR 228
KP PP +
Sbjct: 296 PILKPIPPKK 305
>L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans
chromodomain proteinprotein 1 protein.
Length = 304
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = -1
Query: 392 EQPKPRQRQHSNSEPELVPVMKKIDETPGYE-NIMKENQRIIKNKVSERKPEPPPRALNG 216
E+P P++++ EPE ++ DE E +KE++++ +++ E + N
Sbjct: 151 EEPVPKKKKEVQEEPEEEESVEGEDEEESQEVEDLKEDEKMEEDEKEEEEDVQLESEKNE 210
Query: 215 IETDPTLVSNLXEGESRETRSDI 147
E + V E E E +I
Sbjct: 211 KEEEEEKVEEKKEEEEEEEEEEI 233
>AL023844-8|CAA19534.1| 396|Caenorhabditis elegans Hypothetical
protein Y48A6B.13 protein.
Length = 396
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Frame = -1
Query: 434 PPAILSPFSSPPSIEQPKPRQRQHSNSEPELVP-VMKKIDETPGYENIMKENQRIIKNKV 258
PP S S+ P +E+ KP + S +L P + D + GYE ++ ++ ++ +
Sbjct: 250 PPPPASTASAEPIVEK-KPLREGSSGGAVQLPPSTLAASDISFGYEETPEDKRKRLQKES 308
Query: 257 ---------SERKPEPPPRALNG 216
+++ P PPP +NG
Sbjct: 309 KSVTSPPPPTQKAPPPPPTRMNG 331
>AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacting
protein protein 6 protein.
Length = 1106
Score = 28.3 bits (60), Expect = 6.6
Identities = 24/100 (24%), Positives = 38/100 (38%)
Frame = -1
Query: 434 PPAILSPFSSPPSIEQPKPRQRQHSNSEPELVPVMKKIDETPGYENIMKENQRIIKNKVS 255
P SP +P P +Q + N P P M+ ++ T + QR
Sbjct: 903 PTVKASPAQNPNKPNTPAQKQNKF-NGSPNKKPNMRPVNRTGNSQ--APPWQR------- 952
Query: 254 ERKPEPPPRALNGIETDPTLVSNLXEGESRETRSDIGSDR 135
R+P PPP + P + ++R + D+G DR
Sbjct: 953 SRQPSPPPSNQSPWRQQPQQQYGIQSNQNRGFQMDLGMDR 992
>AC024791-4|AAK95890.1| 1186|Caenorhabditis elegans Msh (muts
homolog) family protein 6 protein.
Length = 1186
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/93 (21%), Positives = 41/93 (44%)
Frame = -1
Query: 428 AILSPFSSPPSIEQPKPRQRQHSNSEPELVPVMKKIDETPGYENIMKENQRIIKNKVSER 249
+++S F+ P E+P+ ++ S EP+ + ++TP N ++++K S+
Sbjct: 7 SLMSFFTKTPKSEKPEEEVKEKSVEEPKSLK-----NDTPKISN--DSEKKVLKRSNSKT 59
Query: 248 KPEPPPRALNGIETDPTLVSNLXEGESRETRSD 150
P N + +V + EGE + D
Sbjct: 60 VSSPVKTPRNASKRPKVVVCSSSEGEDDDGDED 92
>U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical
protein F53B3.2 protein.
Length = 634
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = -1
Query: 419 SPFSSPPSIEQPKPRQRQHSNSEPELVPVMKKIDETPGYENIMKENQRIIKNKVSER 249
+P S P+PR R + +EP+++ +K T E+ E+ I +ER
Sbjct: 143 TPVPEVTSTYDPRPRFRYTTTTEPQIIKFVKTTKPTTTTEDTTTEDDIIRFTTTTER 199
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,626,944
Number of Sequences: 27780
Number of extensions: 214018
Number of successful extensions: 1086
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1068
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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