Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_K20
(799 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 287 2e-78
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 282 4e-77
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 116 3e-27
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 61 2e-10
SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharom... 31 0.19
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.25
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 29 0.77
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.77
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.3
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 28 1.3
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 28 1.3
SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein Msa1|Schizosa... 27 3.1
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 3.1
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.4
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 26 5.4
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 26 7.2
SPBC19G7.10c |||topoisomerase associated protein |Schizosaccharo... 26 7.2
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 25 9.5
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 287 bits (703), Expect = 2e-78
Identities = 126/157 (80%), Positives = 141/157 (89%)
Frame = -3
Query: 602 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 423
HE SV EITN CFEP NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+ +IK++RTIQ
Sbjct: 287 HESNSVQEITNQCFEPYNQMVKCDPRTGRYMATCLLYRGDVIPRDVQAAVTSIKSRRTIQ 346
Query: 422 FVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKR 243
FVDWCPTGFK+GI Y+PP VPG +AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KR
Sbjct: 347 FVDWCPTGFKIGICYEPPQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKR 406
Query: 242 AFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 132
AFVHWYVGEGMEEGEFSEAREDLAALE+DYEEVG DS
Sbjct: 407 AFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQDS 443
Score = 46.4 bits (105), Expect = 5e-06
Identities = 23/33 (69%), Positives = 24/33 (72%)
Frame = -1
Query: 745 SSITASLRXDGALNVTSPEFQTNLVPYPPYPLP 647
SSITASLR G+LNV EFQTNLVPYP P
Sbjct: 240 SSITASLRFAGSLNVDLNEFQTNLVPYPRIHFP 272
Score = 40.3 bits (90), Expect = 3e-04
Identities = 24/65 (36%), Positives = 29/65 (44%)
Frame = -2
Query: 798 DXGPPTYPNLNXXIGQXXPRSLLL*DXTAL*M*PHXSSRLTWCXTPRIHFPLVTYAPVIS 619
D PTY NLN I Q + PRIHFPLVTY+P++S
Sbjct: 222 DIERPTYENLNRLIAQVVSSITASLRFAGSLNVDLNEFQTNLVPYPRIHFPLVTYSPIVS 281
Query: 618 AEKAY 604
A KA+
Sbjct: 282 AAKAF 286
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 282 bits (692), Expect = 4e-77
Identities = 125/157 (79%), Positives = 139/157 (88%)
Frame = -3
Query: 602 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 423
HE SV EITN CFEP NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+ TIK KRTIQ
Sbjct: 283 HESNSVQEITNQCFEPYNQMVKCDPRAGRYMATCLLYRGDVIPRDVQAAVTTIKAKRTIQ 342
Query: 422 FVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKR 243
FVDWCPTGFK+GI +PP + G ++AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KR
Sbjct: 343 FVDWCPTGFKIGICDRPPQHIEGSEIAKVDRAVCMLSNTTSIAEAWSRLDHKFDLMYSKR 402
Query: 242 AFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 132
AFVHWYVGEGMEEGEFSEAREDLAALE+DYEEVG DS
Sbjct: 403 AFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQDS 439
Score = 48.4 bits (110), Expect = 1e-06
Identities = 23/33 (69%), Positives = 25/33 (75%)
Frame = -1
Query: 745 SSITASLRXDGALNVTSPEFQTNLVPYPPYPLP 647
SSITASLR +G+LNV EFQTNLVPYP P
Sbjct: 236 SSITASLRFEGSLNVDLAEFQTNLVPYPRIHFP 268
Score = 41.5 bits (93), Expect = 1e-04
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = -2
Query: 663 PRIHFPLVTYAPVISAEKAY 604
PRIHFPLVTYAP++SA KA+
Sbjct: 263 PRIHFPLVTYAPIVSAAKAF 282
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 116 bits (280), Expect = 3e-27
Identities = 59/158 (37%), Positives = 91/158 (57%), Gaps = 3/158 (1%)
Frame = -3
Query: 599 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQF 420
+ +SV E+T F+ N MV DPRHG+Y+ L+RG V K+V+ I +++TK + F
Sbjct: 282 QAVSVPELTQQMFDANNMMVAADPRHGRYLTVAALFRGKVSMKEVDEQIRSVQTKNSAYF 341
Query: 419 VDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRA 240
V+W P + PP DL + + + N+T+I E + RL +F M+ ++A
Sbjct: 342 VEWIPDNVLKAVCSVPPK-----DL---KMSATFIGNSTSIQEIFRRLGDQFSAMFRRKA 393
Query: 239 FVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEVGMD 135
F+HWY GEGM+E EF+EA DL + + Y+E G+D
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAGID 431
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -1
Query: 745 SSITASLRXDGALNVTSPEFQTNLVPYP 662
+ +T S R G LN + N+VP+P
Sbjct: 234 AGVTTSFRFPGELNSDLRKLAVNMVPFP 261
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 61.3 bits (142), Expect = 2e-10
Identities = 38/151 (25%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Frame = -3
Query: 590 SVAEITNACFEPANQMVKCDP-RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 414
+V ++ P NQMV +P + +++ + +G+ P DV+ ++ I+ +R F+
Sbjct: 291 TVLDVMRRLLLPKNQMVSVNPSKKSCFISILDIIQGEADPADVHKSLLRIRERRYASFIP 350
Query: 413 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFV 234
W P +V ++ + P + ++ + ML+N T+IA + R ++D + + AF+
Sbjct: 351 WGPASIQVALSKKSPYIKTNHRVSGL-----MLANHTSIASLFKRTLDQYDRLRKRNAFL 405
Query: 233 HWYVGEGMEE---GEFSEAREDLAALEKDYE 150
Y E + E EF +R+ +A L +YE
Sbjct: 406 EQYKKEAIFEDDLNEFDSSRDVVADLINEYE 436
>SPAC3G9.14 |sak1||transcriptional repressor
Sak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 766
Score = 31.1 bits (67), Expect = 0.19
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Frame = -1
Query: 685 QTNLVPYPPYPLPTGHVRASHLCREGLP----MNSFPSPRSQTHASSPPTRW*NATPVMA 518
QTNL P + P H SHL + +P +S PSP + + S PT + P +
Sbjct: 259 QTNLQLAPSFAAPQAHPLPSHLSQSNVPPQLSHSSVPSP-APPRSVSQPTYFSQPMPQFS 317
Query: 517 STWLAVCCTVV-TSYP 473
S+++ ++V T +P
Sbjct: 318 SSFVPGTSSIVPTLHP 333
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 30.7 bits (66), Expect = 0.25
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 490 VVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 356
VV P + RP++P P LS V PV+ V + PP P
Sbjct: 552 VVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 29.1 bits (62), Expect = 0.77
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = -1
Query: 745 SSITASLRXDGALNVTSPEFQTNLVPYPPYPLPTGHVR---ASHLCREGLPMNSFPSPRS 575
S I S+ G V SP + + P PP P PT V+ R + + P+P +
Sbjct: 704 SIIADSMSPMGTGAVNSPAIKPQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAPLT 763
Query: 574 QTHASSP 554
++S+P
Sbjct: 764 HANSSTP 770
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.1 bits (62), Expect = 0.77
Identities = 21/80 (26%), Positives = 34/80 (42%)
Frame = -1
Query: 607 LPMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVL 428
+P S +P + T+ ++ + +TPV ++ CT TS P T + S P
Sbjct: 413 VPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPY--TSTPVTSTPLTT 470
Query: 427 SNSSTGVQPVSRSVSTTSHP 368
+N +T S TS P
Sbjct: 471 TNCTTSTSIPYTSTPVTSTP 490
Score = 28.7 bits (61), Expect = 1.0
Identities = 26/100 (26%), Positives = 45/100 (45%)
Frame = -1
Query: 673 VPYPPYPLPTGHVRASHLCREGLPMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCC 494
VPY P+ + + S P+ S +P + T+ ++ + +TPV ++ C
Sbjct: 502 VPYTSTPVTSSNYTIS----SSTPVTS--TPVTTTNCTTSTSVLYTSTPVTSTPLATTNC 555
Query: 493 TVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 374
T TS P T P S ++ S++ PV+ + TTS
Sbjct: 556 TTSTSVPYTST-PVTSSNYTISSSTPVTSTPVTTTNCTTS 594
Score = 26.2 bits (55), Expect = 5.4
Identities = 32/127 (25%), Positives = 48/127 (37%), Gaps = 3/127 (2%)
Frame = -1
Query: 745 SSITASLRXDGALNVTSPEFQTNLVPYPPYPLPTGHVRASHLCREGLPMNSFP---SPRS 575
+S T S N T+P T PL T + S +P S P +P +
Sbjct: 391 TSCTTSTSIPPTGNSTTPVTPTVPPTSSSTPLTTTNCTTS----TSVPYTSTPVTSTPLA 446
Query: 574 QTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVS 395
T+ ++ + +TPV ++ CT TS P T + S P +N +T
Sbjct: 447 TTNCTTSTSVPYTSTPVTSTPLTTTNCTTSTSIPY--TSTPVTSTPLTTTNCTTSTSVPY 504
Query: 394 RSVSTTS 374
S TS
Sbjct: 505 TSTPVTS 511
Score = 25.4 bits (53), Expect = 9.5
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Frame = -1
Query: 673 VPYPPYPLPTGHVRASHLCRE-GLPMNSFP---SPRSQTHASSPPTRW*NATPVMASTWL 506
VPY P+ + + ++ +P S P +P + T+ ++ + +TPV +S +
Sbjct: 456 VPYTSTPVTSTPLTTTNCTTSTSIPYTSTPVTSTPLTTTNCTTSTSVPYTSTPVTSSNYT 515
Query: 505 AVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQ-PVSRSVSTTS 374
T VTS P T + + SVL S+ P++ + TTS
Sbjct: 516 ISSSTPVTSTPV--TTTNCTTSTSVLYTSTPVTSTPLATTNCTTS 558
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -3
Query: 578 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 453
+ ACFEP N C H K C L + KD N ++
Sbjct: 361 LCGACFEPINAKCYCG-LHSKTYPCSSLPSPSISKKDENGSV 401
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 450 SDGRVHILGYDVTTVQHTASHVLAMTGVAFHHLVGGLEACVCDLGDGK 593
S G +LGY ++ A++V+A + V HL+ G D + K
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESK 454
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 28.3 bits (60), Expect = 1.3
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -1
Query: 286 GLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS--RRITKKSAWTPLKARVR 113
G+ TS TS T S S++ S+P P W P+ S+ TP+ V
Sbjct: 148 GVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSALGTSSKTPVYVVVD 207
Query: 112 EPKSTK 95
EP+ TK
Sbjct: 208 EPRFTK 213
>SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein
Msa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 533
Score = 27.1 bits (57), Expect = 3.1
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -1
Query: 697 SPEFQTNLVPYPPYPLPTGHVRASHLCREGLPMNSFPSPRSQTHASSPP 551
SP++Q PYP +P P R + + PM+ F S Q+ A+ PP
Sbjct: 448 SPQYQYPSYPYPMFPAPFSPPR-NAMMPIPAPMDQF-STFHQSMATLPP 494
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.1 bits (57), Expect = 3.1
Identities = 19/67 (28%), Positives = 25/67 (37%), Gaps = 5/67 (7%)
Frame = -1
Query: 700 TSPEFQTNLVPYPPYPLPTGHVR-----ASHLCREGLPMNSFPSPRSQTHASSPPTRW*N 536
T+P T PP P+PT +S P +S PSP S S + +
Sbjct: 1215 TAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASPSPTSSSMAS 1274
Query: 535 ATPVMAS 515
A P S
Sbjct: 1275 AAPARTS 1281
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -1
Query: 454 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 368
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 26.2 bits (55), Expect = 5.4
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -1
Query: 700 TSPEFQTNLVPYPPYPLPTGHVRASHLCREGLPMNSFPSPRSQTHASS 557
TSP + + P P PLP+ + + L E L S P+ S T S
Sbjct: 555 TSP-VKLAVTPQAPSPLPSSNPSQASLTEESLSTRSSPTKPSTTSLRS 601
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 473 WVRRHHGTAYSKPCTCHDGG 532
W R H Y+KPC DGG
Sbjct: 16 WRRDHPFGFYAKPCKSSDGG 35
>SPBC19G7.10c |||topoisomerase associated protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 744
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -1
Query: 787 PNLPQP*XXHRTDXSSITASLRXDGALNVTSPEFQTNLVPYPPYP 653
PN+P TD + + A + + +P Q +LVP PYP
Sbjct: 226 PNIPST----TTDFAGLAAPNMVHPSQAIPNPVMQPSLVPQMPYP 266
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -1
Query: 457 PSLPSKPSVLSNSST--GVQPVSRSVSTTSHPPW 362
P PS+P+++SN ST G+Q V V + W
Sbjct: 531 PISPSRPALISNISTKKGIQVVGNMVYDPTRLRW 564
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,129,910
Number of Sequences: 5004
Number of extensions: 67510
Number of successful extensions: 258
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 255
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 389395636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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