Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_K19
(796 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical pr... 34 0.13
AF039041-2|AAP46270.1| 587|Caenorhabditis elegans Hypothetical ... 32 0.54
U32305-11|AAL50323.1| 663|Caenorhabditis elegans Splicing facto... 29 2.9
U32305-10|AAM75378.1| 749|Caenorhabditis elegans Splicing facto... 29 2.9
U32305-9|AAM75380.1| 751|Caenorhabditis elegans Splicing factor... 29 2.9
U06932-1|AAA64937.1| 749|Caenorhabditis elegans CeSWAP protein. 29 2.9
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 29 2.9
AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical... 29 2.9
Z68119-1|CAA92191.1| 523|Caenorhabditis elegans Hypothetical pr... 29 3.8
AC084155-5|AAK84606.1| 433|Caenorhabditis elegans Hypothetical ... 29 5.1
U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical pr... 28 6.7
L17337-4|ABM74561.1| 217|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr... 28 8.9
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 28 8.9
AL023844-11|CAA19525.3| 489|Caenorhabditis elegans Hypothetical... 28 8.9
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ... 28 8.9
AF016674-3|AAB66128.1| 558|Caenorhabditis elegans Hypothetical ... 28 8.9
>U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical
protein ZK154.5 protein.
Length = 1105
Score = 33.9 bits (74), Expect = 0.13
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
Frame = -3
Query: 419 ELIEEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTE--PDTKTAQRKRKIVTENAEEQNV 246
E I++E+ + +Q A ++ V P A E + K R +E
Sbjct: 61 EEIKKELGEPIQVATDNVRRSDRQVKPSAKMVLVAECAKEIKFDVRDEDQAYNFDDEPEE 120
Query: 245 GRAHKNEHVPKKIDVAKKEVTAGYQYQNATYDKXYN 138
G + N +VP + V K++ Y Y +T D N
Sbjct: 121 GTSSSNSYVPTNVKVVKRKTPTMYAYSGSTIDHEKN 156
>AF039041-2|AAP46270.1| 587|Caenorhabditis elegans Hypothetical
protein W03F8.10 protein.
Length = 587
Score = 31.9 bits (69), Expect = 0.54
Identities = 23/89 (25%), Positives = 40/89 (44%)
Frame = -3
Query: 398 LQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEEQNVGRAHKNEHV 219
+QKLQK Q H D + A+ + D + + K + + N+ + E +
Sbjct: 1 MQKLQK-QVHALIDTANNIEDTGVASAYDADFEKMEETLKETKKALSDANISK-EDIEEM 58
Query: 218 PKKIDVAKKEVTAGYQYQNATYDKXYNVT 132
KK+ + KK+V AG + A + N+T
Sbjct: 59 SKKLALLKKQVIAGREKLGAIETRISNIT 87
>U32305-11|AAL50323.1| 663|Caenorhabditis elegans Splicing factor
(suppressor ofwhite apricot) related protein 1, isoform
b protein.
Length = 663
Score = 29.5 bits (63), Expect = 2.9
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 5/126 (3%)
Frame = -2
Query: 540 AEMFVPPYSRYVNYRTLAQEEIAKDIKEMEAKVA-----AISPGKRADRGGGSAEAAKGA 376
A +F+ + + L +EE ++E K A ++S K R EA KGA
Sbjct: 510 ARIFMEKLLQEKKAKKLQEEEERSKLEEETRKKAEKISESLSERKNTGRSDRREEAPKGA 569
Query: 375 VAHXXXXXXXXXXXXXXXXXXXRYENGPTETKNRHRKRRGTKCRAGPQKRTCSEKNRCRE 196
+ E T+ ++R RKR + R+ + R+CS ++R RE
Sbjct: 570 RSLDEIINNRINSLLSESGFEPVEEMKRTD-EDRERKRHRKRSRSRRRSRSCSPRDRSRE 628
Query: 195 KGGHRR 178
R+
Sbjct: 629 HKKSRK 634
>U32305-10|AAM75378.1| 749|Caenorhabditis elegans Splicing factor
(suppressor ofwhite apricot) related protein 1, isoform
a protein.
Length = 749
Score = 29.5 bits (63), Expect = 2.9
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 5/126 (3%)
Frame = -2
Query: 540 AEMFVPPYSRYVNYRTLAQEEIAKDIKEMEAKVA-----AISPGKRADRGGGSAEAAKGA 376
A +F+ + + L +EE ++E K A ++S K R EA KGA
Sbjct: 596 ARIFMEKLLQEKKAKKLQEEEERSKLEEETRKKAEKISESLSERKNTGRSDRREEAPKGA 655
Query: 375 VAHXXXXXXXXXXXXXXXXXXXRYENGPTETKNRHRKRRGTKCRAGPQKRTCSEKNRCRE 196
+ E T+ ++R RKR + R+ + R+CS ++R RE
Sbjct: 656 RSLDEIINNRINSLLSESGFEPVEEMKRTD-EDRERKRHRKRSRSRRRSRSCSPRDRSRE 714
Query: 195 KGGHRR 178
R+
Sbjct: 715 HKKSRK 720
>U32305-9|AAM75380.1| 751|Caenorhabditis elegans Splicing factor
(suppressor ofwhite apricot) related protein 1, isoform
d protein.
Length = 751
Score = 29.5 bits (63), Expect = 2.9
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 5/126 (3%)
Frame = -2
Query: 540 AEMFVPPYSRYVNYRTLAQEEIAKDIKEMEAKVA-----AISPGKRADRGGGSAEAAKGA 376
A +F+ + + L +EE ++E K A ++S K R EA KGA
Sbjct: 598 ARIFMEKLLQEKKAKKLQEEEERSKLEEETRKKAEKISESLSERKNTGRSDRREEAPKGA 657
Query: 375 VAHXXXXXXXXXXXXXXXXXXXRYENGPTETKNRHRKRRGTKCRAGPQKRTCSEKNRCRE 196
+ E T+ ++R RKR + R+ + R+CS ++R RE
Sbjct: 658 RSLDEIINNRINSLLSESGFEPVEEMKRTD-EDRERKRHRKRSRSRRRSRSCSPRDRSRE 716
Query: 195 KGGHRR 178
R+
Sbjct: 717 HKKSRK 722
>U06932-1|AAA64937.1| 749|Caenorhabditis elegans CeSWAP protein.
Length = 749
Score = 29.5 bits (63), Expect = 2.9
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 5/126 (3%)
Frame = -2
Query: 540 AEMFVPPYSRYVNYRTLAQEEIAKDIKEMEAKVA-----AISPGKRADRGGGSAEAAKGA 376
A +F+ + + L +EE ++E K A ++S K R EA KGA
Sbjct: 596 ARIFMEKLLQEKKAKKLQEEEERSKLEEETRKKAEKISESLSERKNTGRSDRREEAPKGA 655
Query: 375 VAHXXXXXXXXXXXXXXXXXXXRYENGPTETKNRHRKRRGTKCRAGPQKRTCSEKNRCRE 196
+ E T+ ++R RKR + R+ + R+CS ++R RE
Sbjct: 656 RSLDEIINNRINSLLSESGFEPVEEMKRTD-EDRERKRHRKRSRSRRRSRSCSPRDRSRE 714
Query: 195 KGGHRR 178
R+
Sbjct: 715 HKKSRK 720
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = -3
Query: 419 ELIEEEVLQKLQKAQSHIEHDKTS-VAPQAAAANDTEP-DTKTAQRKRKIVTENAEEQNV 246
E EEE L L + + K + VAP+A AA + P D K +++K++ E EE V
Sbjct: 108 EADEEEDLDALLASFQEKDGPKVAEVAPEAVAAPEAAPVDDKKSKKKKEKPVEKPEEPAV 167
Query: 245 GRAHKNEHVPKKIDVAKKE 189
E K D K+
Sbjct: 168 EEDSDGEGDEKDQDKKDKK 186
>AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical
protein Y54F10BM.2 protein.
Length = 1173
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = -3
Query: 419 ELIEEEVLQKLQKAQSHIEHDKTS-VAPQAAAANDTEP-DTKTAQRKRKIVTENAEEQNV 246
E EEE L L + + K + VAP+A AA + P D K +++K++ E EE V
Sbjct: 108 EADEEEDLDALLASFQEKDGPKVAEVAPEAVAAPEAAPVDDKKSKKKKEKPVEKPEEPAV 167
Query: 245 GRAHKNEHVPKKIDVAKKE 189
E K D K+
Sbjct: 168 EEDSDGEGDEKDQDKKDKK 186
>Z68119-1|CAA92191.1| 523|Caenorhabditis elegans Hypothetical
protein T18D3.1 protein.
Length = 523
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/71 (22%), Positives = 36/71 (50%)
Frame = -2
Query: 291 TETKNRHRKRRGTKCRAGPQKRTCSEKNRCREKGGHRRLPIPERDLRQVXQRNQQY*ADK 112
+ + ++H + K R ++R +EK +EK GHR P++ ++ ++ +
Sbjct: 425 SSSSSKHETKEERKARK-EKERERAEKKAKKEKDGHREEEKPKKKDKKHETEEERAERKR 483
Query: 111 GQKVEETKRER 79
+K E+ ++ER
Sbjct: 484 KEKKEKERQER 494
>AC084155-5|AAK84606.1| 433|Caenorhabditis elegans Hypothetical
protein Y45G5AM.7 protein.
Length = 433
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/98 (19%), Positives = 36/98 (36%), Gaps = 1/98 (1%)
Frame = -2
Query: 519 YSRYVNYRTLAQEEIAKDIKEMEAKVAAISPGKRADRGGGSAEAAKGAVAHXXXXXXXXX 340
+S VN++ EE+ + +K+ ++++A + + +G A
Sbjct: 292 FSATVNHQNAVIEELTQTVKQKQSEIAELKDQLEKQESRIKGDLKRGLAADYRQKLGMVS 351
Query: 339 XXXXXXXXXXRYENGPTETKNRHRKR-RGTKCRAGPQK 229
YEN E +RKR +C PQ+
Sbjct: 352 SLDTHPIRTPLYENPFYEWNQENRKRNERAQCPPSPQR 389
>U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical
protein C34F11.5 protein.
Length = 894
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = -3
Query: 338 QAAAANDTEPDTKTAQRKRKIVTENAEEQNVGRAHKNEHVPKK 210
+ AAA + E + + ++K K E +E++ +AHK PKK
Sbjct: 833 EEAAAKENEKEIRKTKKKSKDKKEGRKEESKEKAHKKSK-PKK 874
>L17337-4|ABM74561.1| 217|Caenorhabditis elegans Hypothetical
protein ZK686.4 protein.
Length = 217
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -3
Query: 386 QKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEEQN 249
+K ++ +E V + A D + D KT RKRK T EE++
Sbjct: 146 EKKEAQVEQLLEDVQEEEARMADFKKDKKTDNRKRKRDTRKDEEED 191
>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical protein
T08A11.1 protein.
Length = 1872
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -3
Query: 410 EEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEEQ-NVGRAH 234
E+ +LQ+LQ+ + DK+ V AA +P + RK VT++ +E+ G +
Sbjct: 1199 EQLILQRLQRGYQIVLLDKSLVEVSCEAAK--KPSSSRPDLSRKQVTKSEKERVGSGGSE 1256
Query: 233 KNEHVPKKI 207
++ P+ I
Sbjct: 1257 RSRSNPRTI 1265
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = -3
Query: 320 DTEPDTKT--AQRKRKIVTENAEEQNVGRAHKNEHVPKK 210
D+EP T + A+R ++ ++ EEQ++ +K+ PKK
Sbjct: 589 DSEPSTSSTAAKRSKRAESDEEEEQDLKLTNKSPEKPKK 627
>AL023844-11|CAA19525.3| 489|Caenorhabditis elegans Hypothetical
protein Y48A6B.10 protein.
Length = 489
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/65 (21%), Positives = 33/65 (50%)
Frame = -3
Query: 383 KAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEEQNVGRAHKNEHVPKKID 204
++ S + + T P +A+ + PD + ++K+K+ + E ++ A + E +I
Sbjct: 313 QSNSRLTANNTITPPSSASTSPPPPDPENQKKKKKLKKAD-ESEDHEEAEEEEDKENEIS 371
Query: 203 VAKKE 189
V ++E
Sbjct: 372 VEERE 376
>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -3
Query: 410 EEEVLQKLQKAQSHIEHDKTSVAPQAAAANDTEPDTKTAQRKRKIVTENAEEQ-NVGRAH 234
E+ +LQ+LQ+ + DK+ V AA +P + RK VT++ +E+ G +
Sbjct: 1199 EQLILQRLQRGYQIVLLDKSLVEVSCEAAK--KPSSSRPDLSRKQVTKSEKERVGSGGSE 1256
Query: 233 KNEHVPKKI 207
++ P+ I
Sbjct: 1257 RSRSNPRTI 1265
>AF016674-3|AAB66128.1| 558|Caenorhabditis elegans Hypothetical
protein C03H5.5 protein.
Length = 558
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = -2
Query: 630 YFEVNPEVEAXIPASMMFP-EGTIVSALNADAEMFVPPYSRYVNYRTLAQEEIAKDIKEM 454
Y++ V+ +P S +P E T+ +++ + + F+ Y R A+ KD+ E
Sbjct: 121 YYDRLETVQKQLPPSFTWPDEITVRKSISPENQDFMVLYKELKYRRLNAEARQNKDMLEN 180
Query: 453 EAKVAAISPGK 421
+ +I PGK
Sbjct: 181 YQSIFSILPGK 191
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,796,224
Number of Sequences: 27780
Number of extensions: 252550
Number of successful extensions: 1175
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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