Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_K17
         (870 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92830-15|CAN86918.1|  366|Caenorhabditis elegans Hypothetical p...    29   5.7  
Z92830-14|CAB07352.1|  363|Caenorhabditis elegans Hypothetical p...    29   5.7  
Z70203-1|CAA94104.1|  456|Caenorhabditis elegans Hypothetical pr...    28   7.5  

>Z92830-15|CAN86918.1|  366|Caenorhabditis elegans Hypothetical
           protein F11A5.5b protein.
          Length = 366

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 421 FQEPSILVEFEDHYIELVVHRYKYW 495
           F +PS+L  +ED Y+ L    Y+ W
Sbjct: 156 FDDPSLLDNYEDEYLHLTGTHYQSW 180


>Z92830-14|CAB07352.1|  363|Caenorhabditis elegans Hypothetical
           protein F11A5.5a protein.
          Length = 363

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 421 FQEPSILVEFEDHYIELVVHRYKYW 495
           F +PS+L  +ED Y+ L    Y+ W
Sbjct: 153 FDDPSLLDNYEDEYLHLTGTHYQSW 177


>Z70203-1|CAA94104.1|  456|Caenorhabditis elegans Hypothetical
           protein C05G5.1 protein.
          Length = 456

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/60 (23%), Positives = 29/60 (48%)
 Frame = -2

Query: 332 LLLFFPQSVKLIYNVTSAICIGRNTLKSMHQLAIRRVIEGSTANHAPATWKEFHNCCLLC 153
           L++   Q   + Y + + + +G+      H +AI+  ++ ++ NH   TWK      L+C
Sbjct: 368 LIIMIGQVQGVFYVIMTNLAVGK---PDPHDMAIQTCVDTNSQNHTVLTWKWPFLIWLIC 424


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,660,186
Number of Sequences: 27780
Number of extensions: 247677
Number of successful extensions: 556
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 556
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)