Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_K14
(835 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1815.01 |eno101|eno1|enolase|Schizosaccharomyces pombe|chr 2... 213 3e-56
SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase |Schizosa... 195 6e-51
SPAC1039.06 |||alanine racemase |Schizosaccharomyces pombe|chr 1... 29 1.1
SPBC36.08c |cog2||Golgi transport complex subunit Cog2 |Schizosa... 28 1.9
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 27 2.5
SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein |Schizo... 26 7.6
SPAC644.06c |cdr1|nim1|GIN4 family protein kinase Cdr1|Schizosac... 26 7.6
SPAC16E8.03 |gna1|spgna1|glucosamine-phosphate N-acetyltransfera... 26 7.6
>SPBC1815.01 |eno101|eno1|enolase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 439
Score = 213 bits (519), Expect = 3e-56
Identities = 97/141 (68%), Positives = 115/141 (81%)
Frame = -3
Query: 692 KGFPMVSIEDPFDQDDWSAWANLTGRTPIQIVGDDLTVTNPKRIATAVEKKACNCLLLKV 513
K +P+VSIEDPFDQDDWSAW ++ T QIVGDDLTVTN KR+ TA++KK N LLLKV
Sbjct: 287 KKYPIVSIEDPFDQDDWSAWTHMKAETDFQIVGDDLTVTNVKRLRTAIDKKCANALLLKV 346
Query: 512 NQIGSVTESIDAHLLAKKNGWGTMVSHRSGETEDTFIADLVVGLSTGQIKTGAPCRSERL 333
NQIGSVTES++A ++ + GWG MVSHRSGET DTFI+ L VG+ GQ+K+GAPCRSERL
Sbjct: 347 NQIGSVTESLNAVRMSYEAGWGVMVSHRSGETADTFISHLTVGIGAGQLKSGAPCRSERL 406
Query: 332 AKYNQILRIEEELGVNAKYAG 270
AKYN++LRIEEELG YAG
Sbjct: 407 AKYNELLRIEEELGSEGVYAG 427
Score = 31.5 bits (68), Expect = 0.15
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 781 KYDLDFKIPDSNPGXYLSSDKLADVYLTSSKVFP 680
KYDLD K P L+ +L D+Y+ SK +P
Sbjct: 257 KYDLDIKAAKPKPENKLTYQQLTDLYVELSKKYP 290
>SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 440
Score = 195 bits (476), Expect = 6e-51
Identities = 86/142 (60%), Positives = 117/142 (82%)
Frame = -3
Query: 695 IKGFPMVSIEDPFDQDDWSAWANLTGRTPIQIVGDDLTVTNPKRIATAVEKKACNCLLLK 516
I+ +P+V IEDPF ++DW A++ ++ +T ++++ DDLTVTN KR++ A+E K N LL+K
Sbjct: 287 IEKYPIVFIEDPFSEEDWGAFSYMSSKTKVEVIADDLTVTNVKRLSKAIELKCANALLVK 346
Query: 515 VNQIGSVTESIDAHLLAKKNGWGTMVSHRSGETEDTFIADLVVGLSTGQIKTGAPCRSER 336
+NQIGS++E+IDA +AKK GWG MVSHRSGET+D+FIA L VGL GQ+K+GAPCRSER
Sbjct: 347 INQIGSLSETIDAANMAKKAGWGLMVSHRSGETDDSFIAHLAVGLEAGQMKSGAPCRSER 406
Query: 335 LAKYNQILRIEEELGVNAKYAG 270
LAKYN++LRIE+ LG +A YAG
Sbjct: 407 LAKYNELLRIEDNLGDSAIYAG 428
>SPAC1039.06 |||alanine racemase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 415
Score = 28.7 bits (61), Expect = 1.1
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = -3
Query: 563 IATAVEKKACNCLLLKVNQIGSVTESIDAHLLAKKNGWGTMVSHRSGETEDTFIADLVVG 384
I A+ +K CN +L + + IG VT AH+ K GT++ G T+ ++ L+ G
Sbjct: 40 IDEAIFEKNCNRMLDRASDIG-VT--FRAHVKTHKTIEGTLLQLGDGRTKAVVVSTLMEG 96
Query: 383 LS 378
S
Sbjct: 97 FS 98
>SPBC36.08c |cog2||Golgi transport complex subunit Cog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 191
Score = 27.9 bits (59), Expect = 1.9
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Frame = -1
Query: 754 DSNPGXYLSSDKLADVYLTSSKVF---PWCPLRILLT-RMIGLHGLTSLVARLF 605
D++ G L L+D YL + ++ P+ P L++ R +GL GL + ++RLF
Sbjct: 5 DADSGSDLVDAFLSDAYLNTEELRKDGPFSPDEFLVSKRFLGLDGLVNELSRLF 58
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 27.5 bits (58), Expect = 2.5
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +3
Query: 216 TEFYVFLREFLDRSTEVLP--GVFGVDAKFLFNAQNLVV-LGETLRATRGAGLD 368
+ FY + E RS+EVLP +DAK A+ +++ T A GA LD
Sbjct: 1630 SSFYSLIHESFSRSSEVLPTSSDTNLDAKRAEEAEMIMIETPPTAEANTGAKLD 1683
>SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 391
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -2
Query: 378 HGSD-QDRRPVSLGASRQVQPNSAH*RGTWRQ 286
+GSD RRP LG ++V + +G+WR+
Sbjct: 52 YGSDITPRRPKQLGLPKEVNTSECIDQGSWRK 83
>SPAC644.06c |cdr1|nim1|GIN4 family protein kinase
Cdr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -2
Query: 384 FVHGS-DQDRRPVSLGASRQVQPN 316
FV GS +Q+RRP+S +QPN
Sbjct: 519 FVQGSGNQNRRPISFPVISNMQPN 542
>SPAC16E8.03 |gna1|spgna1|glucosamine-phosphate
N-acetyltransferase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 111
Score = 25.8 bits (54), Expect = 7.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 183 KKVVLTMFVLNKQFNAYHVLQDCSE 109
K +VLT+ L N+Y V+ DCS+
Sbjct: 60 KLMVLTLIKLAFSLNSYKVILDCSD 84
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,170,968
Number of Sequences: 5004
Number of extensions: 63018
Number of successful extensions: 164
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 410448950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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