Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_K12
(806 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 94 2e-20
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 91 1e-19
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 63 4e-11
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 38 0.002
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 37 0.004
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.78
SPAC23C11.04c |pnk1||DNA kinase/phosphatase Pnk1|Schizosaccharom... 29 0.78
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 29 1.0
SPAC821.12 |orb6||serine/threonine protein kinase Orb6|Schizosac... 27 2.4
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 27 4.1
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 26 5.5
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 93.9 bits (223), Expect = 2e-20
Identities = 63/187 (33%), Positives = 91/187 (48%), Gaps = 2/187 (1%)
Frame = -3
Query: 777 FENXXPEYSXQVFXG*ACYDPKITXXLGKFELTRDXHPAPRGVPQN*GHLRHRCQRYPQR 598
+ + P QVF G K LGKFEL+ PAPRGVPQ
Sbjct: 429 YADNQPGVLIQVFEGERART-KDCNLLGKFELS-GIPPAPRGVPQIEVTFDVDANGI--- 483
Query: 597 FRYREVHQXRRTRSPLPTTKVVSPRKRSSVWLMRQRSTETRMTSKRRPSR--PKNALESY 424
+ + + T + + M + + + + SR KN LESY
Sbjct: 484 LNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESY 543
Query: 423 CFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNP 244
+S++++++D LK+K+ SDK+ I +TI+WLD N A K+EYE KQKELEG+ NP
Sbjct: 544 AYSLRNSLDDPNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANP 603
Query: 243 IITKMYQ 223
I+ K+YQ
Sbjct: 604 IMAKIYQ 610
Score = 64.9 bits (151), Expect = 1e-11
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = -2
Query: 571 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAQ 443
K KITITNDKGRLSKEEI+RMV+EAEKY+ ED+ + IQA+
Sbjct: 495 KTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAK 537
Score = 44.8 bits (101), Expect = 1e-05
Identities = 28/59 (47%), Positives = 35/59 (59%)
Frame = -1
Query: 737 EGERAMTQR*XXXSVNSS*PGXPTRRRVACLKIEVTFDIDANGILNVSAIEKSTXQGEQ 561
EGERA T+ P R V +IEVTFD+DANGILNVSA+EK T + ++
Sbjct: 442 EGERARTKDCNLLGKFELSGIPPAPRGVP--QIEVTFDVDANGILNVSALEKGTGKTQK 498
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 91.5 bits (217), Expect = 1e-19
Identities = 61/187 (32%), Positives = 91/187 (48%), Gaps = 2/187 (1%)
Frame = -3
Query: 777 FENXXPEYSXQVFXG*ACYDPKITXXLGKFELTRDXHPAPRGVPQN*GHLRHRCQRYPQR 598
+ + P QVF G K LGKFEL+ PAPRGVPQ
Sbjct: 429 YSDNQPGVLIQVFEGERART-KDCNLLGKFELS-GIPPAPRGVPQIEVTFDVDANGI--- 483
Query: 597 FRYREVHQXRRTRSPLPTTKVVSPRKRSSVWLMRQRSTETRMTSKRRPSR--PKNALESY 424
+ + + T + + M + + + + R KN LESY
Sbjct: 484 LNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESY 543
Query: 423 CFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNP 244
+S++++++D LK+K+ SDK+T+ +TI+WLDSN A K+E+E KQKELE + NP
Sbjct: 544 AYSLRNSLDDPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANP 603
Query: 243 IITKMYQ 223
I+ K+YQ
Sbjct: 604 IMAKIYQ 610
Score = 63.3 bits (147), Expect = 4e-11
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = -2
Query: 571 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAQ 443
K KITITNDKGRLSKEEI+RMV EAEKY+ ED+ + IQA+
Sbjct: 495 KTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAK 537
Score = 44.8 bits (101), Expect = 1e-05
Identities = 28/59 (47%), Positives = 35/59 (59%)
Frame = -1
Query: 737 EGERAMTQR*XXXSVNSS*PGXPTRRRVACLKIEVTFDIDANGILNVSAIEKSTXQGEQ 561
EGERA T+ P R V +IEVTFD+DANGILNVSA+EK T + ++
Sbjct: 442 EGERARTKDCNLLGKFELSGIPPAPRGVP--QIEVTFDVDANGILNVSALEKGTGKTQK 498
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 63.3 bits (147), Expect = 4e-11
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 4/162 (2%)
Frame = -3
Query: 699 LGKFELTRDXHPAPRGVPQN*GHLRHRCQRYPQRFRYREVHQXRRTRSPLPTTKVVSPRK 520
LGKF+L R PAPRGVPQ + + + + + K
Sbjct: 483 LGKFDL-RGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVIKNDK--GRLS 539
Query: 519 RSSVWLMRQRSTETRMTSKRRPSR--PKNALESYCFSMKSTMED-EKLKEKISDSDKQTI 349
+ M + + E K R +N LE+Y +S+K +D E+L K+ DKQ +
Sbjct: 540 EEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLGGKVDPEDKQAV 599
Query: 348 LDKCNDTIKWLD-SNQLADKEEYEHKQKELEGIYNPIITKMY 226
LD D +WL+ + A KEE+E ++++L+ + +PI K+Y
Sbjct: 600 LDAVEDVAEWLEIHGEDASKEEFEDQRQKLDAVVHPITQKLY 641
Score = 55.2 bits (127), Expect = 1e-08
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = -2
Query: 592 LSRSPPXKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAQECI 434
+ +S K K+ I NDKGRLS+E+IERMV EAE++ ED KE I+A+ +
Sbjct: 518 VDKSGKGKPEKLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTL 570
Score = 38.3 bits (85), Expect = 0.001
Identities = 15/22 (68%), Positives = 21/22 (95%)
Frame = -1
Query: 644 KIEVTFDIDANGILNVSAIEKS 579
+IEVTF++DANG+L VSA++KS
Sbjct: 500 QIEVTFEVDANGVLTVSAVDKS 521
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 37.9 bits (84), Expect = 0.002
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = -2
Query: 571 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQ 449
K++ IT+ G L+ EIE MV +AEKYR D +KE I+
Sbjct: 538 KDSSITVAGSSG-LTDSEIEAMVADAEKYRASDMARKEAIE 577
Score = 36.7 bits (81), Expect = 0.004
Identities = 15/23 (65%), Positives = 22/23 (95%)
Frame = -1
Query: 644 KIEVTFDIDANGILNVSAIEKST 576
+IEV+FD+DA+GI+NVSA +K+T
Sbjct: 514 QIEVSFDVDADGIINVSARDKAT 536
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 36.7 bits (81), Expect = 0.004
Identities = 14/23 (60%), Positives = 21/23 (91%)
Frame = -1
Query: 644 KIEVTFDIDANGILNVSAIEKST 576
++E TF++DANGIL V+A+EK+T
Sbjct: 476 ELEATFELDANGILKVTAVEKTT 498
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.78
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 541 KGRLSKEEIERMVNEAEKYRNEDD 470
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPAC23C11.04c |pnk1||DNA kinase/phosphatase
Pnk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 29.1 bits (62), Expect = 0.78
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = -3
Query: 474 MTSKRRPSRPKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQL 301
M+SK+R S P+ +L SY F KS+ +K + DSD + + I+W ++ L
Sbjct: 1 MSSKKRKSPPQESLTSY-FE-KSSKSSKKYGSQNKDSDSSSTCLQQKIEIQWSITDSL 56
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.7 bits (61), Expect = 1.0
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 384 KEKISDSDKQTILD-KCNDTIKWLDSNQLADKEEYEHKQKELE 259
+EKI +++TI D K + + ++ EEY KQKEL+
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQ 469
>SPAC821.12 |orb6||serine/threonine protein kinase
Orb6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 469
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 421 AVRFQCILGPGWSPFACHPRFCTSLPH*PYARSLPWRDDL 540
A+ F+C++G W PF C+ H Y + + WR+ L
Sbjct: 320 AIMFECLIG--WPPF------CSENSHETYRKIINWRETL 351
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -3
Query: 450 RPKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKW 319
R K E YC S+ ST + + K +SD T+L T+ W
Sbjct: 282 RRKEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 26.2 bits (55), Expect = 5.5
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = -3
Query: 459 RPSRPKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKC-NDTIKWLDSNQLADKEEY 283
+ + PKNA ++ M DE+ E S K+ K +D + LD + E+
Sbjct: 118 KKASPKNAFDALADDMDDLSLDEEESESSEKSKKKKKKSKSKDDGSEALDDGDIESSEKD 177
Query: 282 EHKQKE 265
+ K+K+
Sbjct: 178 KKKKKK 183
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,708,253
Number of Sequences: 5004
Number of extensions: 50004
Number of successful extensions: 211
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 392429240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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