BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_K12
(806 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0109 - 22454539-22456268,22457069-22457279 100 3e-21
03_02_0540 + 9340379-9340592,9341250-9342988 99 5e-21
03_02_0546 - 9381989-9383733,9385838-9386054 98 6e-21
01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229 97 1e-20
11_08_0075 + 28173220-28173433,28175348-28177083 97 2e-20
03_06_0484 + 34233042-34233258,34235317-34237049 96 3e-20
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84... 79 3e-15
05_04_0392 - 20889699-20891726 64 2e-10
03_05_0877 + 28443481-28443538,28443641-28443911,28444028-284442... 63 2e-10
08_01_0654 - 5639419-5641449 62 4e-10
05_04_0052 - 17515344-17517353 60 3e-09
03_02_0542 - 9348126-9349585,9352433-9352655 55 6e-08
11_01_0564 - 4447078-4448519,4449465-4449711 47 2e-05
11_01_0563 + 4423609-4423846,4424671-4426132,4428949-4429364,443... 46 4e-05
02_05_0491 + 29470575-29471351,29471574-29471806,29472697-294728... 46 5e-05
02_05_0916 - 32706039-32706332,32707483-32708103,32708450-327090... 41 0.001
11_01_0565 - 4457019-4457052,4457175-4458675,4460791-4460836 41 0.001
03_01_0093 - 745434-746057,746492-747112,747222-747791,747870-74... 40 0.002
05_03_0397 + 13488642-13488941,13489711-13489963,13490594-134906... 40 0.003
01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165 38 0.007
01_01_0573 + 4253484-4254653,4255526-4255735,4255842-4255937,425... 38 0.007
06_03_1137 + 27903012-27904196,27904330-27904542,27905775-279058... 36 0.050
01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819 35 0.066
05_01_0550 + 4820086-4821255,4822112-4822321,4822429-4822524,482... 33 0.35
03_01_0009 - 89127-89924,90090-90518,90582-90716,91102-91382,916... 31 0.82
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 31 1.1
01_01_0862 + 6714041-6714358,6714462-6714603,6715511-6715735,671... 31 1.4
08_02_0274 - 15192670-15192983,15193110-15193200,15193295-151936... 30 1.9
02_05_1189 + 34839840-34840106,34840228-34840346,34841025-348412... 30 2.5
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 29 3.3
01_06_1570 + 38312319-38314259 29 3.3
01_06_0931 - 33139383-33139580,33139748-33139870,33142520-331428... 29 3.3
02_03_0360 + 18104948-18106159 29 4.4
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 29 5.8
12_02_1167 + 26647293-26648356,26648493-26648577,26649129-266491... 28 7.6
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 28 7.6
>05_05_0109 - 22454539-22456268,22457069-22457279
Length = 646
Score = 99.5 bits (237), Expect = 3e-21
Identities = 65/189 (34%), Positives = 98/189 (51%), Gaps = 4/189 (2%)
Frame = -3
Query: 777 FENXXPEYSXQVFXG*ACYDPKITXXLGKFELTRDXHPAPRGVPQN*GHLRHRCQRYPQR 598
+ + P QV+ G K LGKFEL+ PAPRGVPQ + C
Sbjct: 436 YSDNQPGVLIQVYEGERART-KDNNLLGKFELS-GIPPAPRGVPQI-----NVCFDIDAN 488
Query: 597 FRYREVHQXRRT--RSPLPTTKVVSPRKRSSVWLMRQRSTETRMTSKRRPSR--PKNALE 430
+ + T ++ + T + + M Q + + + + + KNALE
Sbjct: 489 GILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVDAKNALE 548
Query: 429 SYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIY 250
+Y ++M++T++DEK+ K++ DK+ I D + I WLD+NQLA+ +E+E K KELEGI
Sbjct: 549 NYAYNMRNTIKDEKIASKLAADDKKRIEDAIDGAISWLDTNQLAEADEFEDKMKELEGIC 608
Query: 249 NPIITKMYQ 223
NPII KMYQ
Sbjct: 609 NPIIAKMYQ 617
Score = 67.3 bits (157), Expect = 1e-11
Identities = 29/46 (63%), Positives = 39/46 (84%)
Frame = -2
Query: 571 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAQECI 434
++NKITITNDKGRLSKEEIE+MV EAEKY+ ED++ K+ + A+ +
Sbjct: 502 QKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVDAKNAL 547
Score = 39.1 bits (87), Expect = 0.004
Identities = 27/56 (48%), Positives = 31/56 (55%)
Frame = -1
Query: 737 EGERAMTQR*XXXSVNSS*PGXPTRRRVACLKIEVTFDIDANGILNVSAIEKSTXQ 570
EGERA T+ P R V +I V FDIDANGILNVSA +K+T Q
Sbjct: 449 EGERARTKDNNLLGKFELSGIPPAPRGVP--QINVCFDIDANGILNVSAEDKTTGQ 502
>03_02_0540 + 9340379-9340592,9341250-9342988
Length = 650
Score = 98.7 bits (235), Expect = 5e-21
Identities = 59/163 (36%), Positives = 90/163 (55%), Gaps = 4/163 (2%)
Frame = -3
Query: 699 LGKFELTRDXHPAPRGVPQN*GHLRHRCQRYPQRFRYREVHQXRRT--RSPLPTTKVVSP 526
LGKFEL+ PAPRGVPQ C + + T ++ + T
Sbjct: 462 LGKFELS-GIPPAPRGVPQI-----TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGR 515
Query: 525 RKRSSVWLMRQRSTETRMTSKRRPSR--PKNALESYCFSMKSTMEDEKLKEKISDSDKQT 352
+ + M Q + + + + + KN+LE+Y ++M++T++D+K+ K+ ++DK+
Sbjct: 516 LSKEDIEKMVQEAEKYKAEDEEHKKKVDAKNSLENYAYNMRNTIKDDKIASKLPEADKKK 575
Query: 351 ILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 223
I D + I WLDSNQLA+ EE+E K KELEG+ NPII KMYQ
Sbjct: 576 IEDAIDGAISWLDSNQLAEAEEFEDKMKELEGVCNPIIAKMYQ 618
Score = 65.7 bits (153), Expect = 4e-11
Identities = 28/46 (60%), Positives = 39/46 (84%)
Frame = -2
Query: 571 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAQECI 434
++NKITITNDKGRLSKE+IE+MV EAEKY+ ED++ K+ + A+ +
Sbjct: 503 QKNKITITNDKGRLSKEDIEKMVQEAEKYKAEDEEHKKKVDAKNSL 548
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = -1
Query: 644 KIEVTFDIDANGILNVSAIEKSTXQ 570
+I V FDIDANGILNVSA +K+T Q
Sbjct: 479 QITVCFDIDANGILNVSAEDKTTGQ 503
>03_02_0546 - 9381989-9383733,9385838-9386054
Length = 653
Score = 98.3 bits (234), Expect = 6e-21
Identities = 57/159 (35%), Positives = 81/159 (50%)
Frame = -3
Query: 699 LGKFELTRDXHPAPRGVPQN*GHLRHRCQRYPQRFRYREVHQXRRTRSPLPTTKVVSPRK 520
LGKFELT PAPRGVPQ + ++ + + K ++
Sbjct: 463 LGKFELT-GIPPAPRGVPQINVTFDIDANGI-LNVSAEDKTTGKKNKITITNDKGRLSKE 520
Query: 519 RSSVWLMRQRSTETRMTSKRRPSRPKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDK 340
+ + R +NALE+Y ++M++T+ DEK+ K+ DK+ I D
Sbjct: 521 EIERMVQEAEKYKAEDEQVRHKVEARNALENYAYNMRNTVRDEKIASKLPADDKKKIEDA 580
Query: 339 CNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 223
D IKWLD NQLA+ +E+E K KELE + NPII+KMYQ
Sbjct: 581 IEDAIKWLDGNQLAEADEFEDKMKELESLCNPIISKMYQ 619
Score = 68.5 bits (160), Expect = 6e-12
Identities = 30/46 (65%), Positives = 39/46 (84%)
Frame = -2
Query: 571 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAQECI 434
K+NKITITNDKGRLSKEEIERMV EAEKY+ ED++ + ++A+ +
Sbjct: 504 KKNKITITNDKGRLSKEEIERMVQEAEKYKAEDEQVRHKVEARNAL 549
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = -1
Query: 644 KIEVTFDIDANGILNVSAIEKST 576
+I VTFDIDANGILNVSA +K+T
Sbjct: 480 QINVTFDIDANGILNVSAEDKTT 502
>01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229
Length = 841
Score = 97.1 bits (231), Expect = 1e-20
Identities = 65/189 (34%), Positives = 96/189 (50%), Gaps = 4/189 (2%)
Frame = -3
Query: 777 FENXXPEYSXQVFXG*ACYDPKITXXLGKFELTRDXHPAPRGVPQN*GHLRHRCQRYPQR 598
+ + P QV+ G K LGKFEL+ PAPRGVPQ C
Sbjct: 629 YSDNQPGVLIQVYEGERART-KDNNLLGKFELS-GIPPAPRGVPQI-----TVCFDIDAN 681
Query: 597 FRYREVHQXRRT--RSPLPTTKVVSPRKRSSVWLMRQRSTETRMTSKRRPSR--PKNALE 430
+ + T ++ + T + + M Q + + + + + KNALE
Sbjct: 682 GILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVDAKNALE 741
Query: 429 SYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIY 250
+Y ++M++T++D+K+ K+S DK+ I D + I WLDSNQLA+ +E+E K KELE I
Sbjct: 742 NYAYNMRNTIKDDKIASKLSADDKKKIEDAIDGAINWLDSNQLAEADEFEDKMKELESIC 801
Query: 249 NPIITKMYQ 223
NPII KMYQ
Sbjct: 802 NPIIAKMYQ 810
Score = 67.3 bits (157), Expect = 1e-11
Identities = 29/46 (63%), Positives = 39/46 (84%)
Frame = -2
Query: 571 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAQECI 434
++NKITITNDKGRLSKEEIE+MV EAEKY+ ED++ K+ + A+ +
Sbjct: 695 QKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVDAKNAL 740
Score = 38.7 bits (86), Expect = 0.005
Identities = 27/56 (48%), Positives = 31/56 (55%)
Frame = -1
Query: 737 EGERAMTQR*XXXSVNSS*PGXPTRRRVACLKIEVTFDIDANGILNVSAIEKSTXQ 570
EGERA T+ P R V +I V FDIDANGILNVSA +K+T Q
Sbjct: 642 EGERARTKDNNLLGKFELSGIPPAPRGVP--QITVCFDIDANGILNVSAEDKTTGQ 695
>11_08_0075 + 28173220-28173433,28175348-28177083
Length = 649
Score = 96.7 bits (230), Expect = 2e-20
Identities = 55/159 (34%), Positives = 85/159 (53%)
Frame = -3
Query: 699 LGKFELTRDXHPAPRGVPQN*GHLRHRCQRYPQRFRYREVHQXRRTRSPLPTTKVVSPRK 520
LGKFEL+ PAPRGVPQ + ++ + + K ++
Sbjct: 462 LGKFELS-GIPPAPRGVPQITVCFDIDANGI-LNVSAEDKTTGQKNKITITNDKGRLSKE 519
Query: 519 RSSVWLMRQRSTETRMTSKRRPSRPKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDK 340
+ ++ ++ KNALE+Y ++M++T++DEK+ K+ +DK+ I D
Sbjct: 520 EIEKMVQEAEKYKSEDEEHKKKVESKNALENYAYNMRNTIKDEKIASKLPAADKKKIEDA 579
Query: 339 CNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 223
+ I+WLD NQLA+ +E++ K KELEGI NPII KMYQ
Sbjct: 580 IDQAIQWLDGNQLAEADEFDDKMKELEGICNPIIAKMYQ 618
Score = 68.1 bits (159), Expect = 8e-12
Identities = 28/46 (60%), Positives = 41/46 (89%)
Frame = -2
Query: 571 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAQECI 434
++NKITITNDKGRLSKEEIE+MV EAEKY++ED++ K+ ++++ +
Sbjct: 503 QKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVESKNAL 548
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = -1
Query: 644 KIEVTFDIDANGILNVSAIEKSTXQ 570
+I V FDIDANGILNVSA +K+T Q
Sbjct: 479 QITVCFDIDANGILNVSAEDKTTGQ 503
>03_06_0484 + 34233042-34233258,34235317-34237049
Length = 649
Score = 95.9 bits (228), Expect = 3e-20
Identities = 59/163 (36%), Positives = 88/163 (53%), Gaps = 4/163 (2%)
Frame = -3
Query: 699 LGKFELTRDXHPAPRGVPQN*GHLRHRCQRYPQRFRYREVHQXRRT--RSPLPTTKVVSP 526
LGKFEL+ PAPRGVPQ C + + T ++ + T
Sbjct: 463 LGKFELS-GIPPAPRGVPQI-----TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGR 516
Query: 525 RKRSSVWLMRQRSTETRMTSKRRPSR--PKNALESYCFSMKSTMEDEKLKEKISDSDKQT 352
+ + M Q + + + + + KN+LE+Y ++M++T++DEK+ K+ DK+
Sbjct: 517 LSKEEIEKMVQDAEKYKSEDEEHKKKVDAKNSLENYAYNMRNTIQDEKIASKLPADDKKK 576
Query: 351 ILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 223
I D I+WLD+NQLA+ EE+E K KELEG+ NPII KMYQ
Sbjct: 577 IEDAVEQAIQWLDNNQLAEVEEFEDKMKELEGLCNPIIAKMYQ 619
Score = 66.9 bits (156), Expect = 2e-11
Identities = 28/46 (60%), Positives = 40/46 (86%)
Frame = -2
Query: 571 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAQECI 434
++NKITITNDKGRLSKEEIE+MV +AEKY++ED++ K+ + A+ +
Sbjct: 504 QKNKITITNDKGRLSKEEIEKMVQDAEKYKSEDEEHKKKVDAKNSL 549
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = -1
Query: 644 KIEVTFDIDANGILNVSAIEKSTXQ 570
+I V FDIDANGILNVSA +K+T Q
Sbjct: 480 QITVCFDIDANGILNVSAEDKTTGQ 504
>02_01_0112 -
839048-839552,839638-839720,839828-839982,840078-840557,
840855-841097,841189-841403,841489-841756,842477-842525
Length = 665
Score = 79.4 bits (187), Expect = 3e-15
Identities = 33/75 (44%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Frame = -3
Query: 444 KNALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQK 268
+N LE+Y ++MK+T+ D +KL +K+ +K+ + + + ++WLD NQ A+KEEYE K K
Sbjct: 568 RNQLETYVYNMKNTVGDKDKLADKLESEEKEKVEEALKEALEWLDENQTAEKEEYEEKLK 627
Query: 267 ELEGIYNPIITKMYQ 223
E+E + NPII+ +YQ
Sbjct: 628 EVEAVCNPIISAVYQ 642
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/43 (65%), Positives = 34/43 (79%)
Frame = -2
Query: 571 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAQ 443
K KITITN+KGRLS+EEI+RMV EAE++ ED K KE I A+
Sbjct: 526 KSEKITITNEKGRLSQEEIDRMVREAEEFAEEDKKVKERIDAR 568
Score = 41.9 bits (94), Expect = 6e-04
Identities = 26/59 (44%), Positives = 34/59 (57%)
Frame = -1
Query: 737 EGERAMTQR*XXXSVNSS*PGXPTRRRVACLKIEVTFDIDANGILNVSAIEKSTXQGEQ 561
EGER+MT+ G P R +IEVTF++DANGILNV A +K T + E+
Sbjct: 473 EGERSMTKDCRLLG-KFDLSGIPAAPR-GTPQIEVTFEVDANGILNVKAEDKGTGKSEK 529
>05_04_0392 - 20889699-20891726
Length = 675
Score = 63.7 bits (148), Expect = 2e-10
Identities = 27/74 (36%), Positives = 49/74 (66%)
Frame = -3
Query: 444 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKE 265
+N+LE+Y +++KST+ K+ + + +K+ + + + +WLD N A KEEYE K +E
Sbjct: 580 RNSLEAYVYNVKSTLGG-KMADAMEGEEKEKVEEAVREAHEWLDGNPDAGKEEYEEKLRE 638
Query: 264 LEGIYNPIITKMYQ 223
LE + NP+++ +YQ
Sbjct: 639 LEDVCNPVMSAVYQ 652
Score = 47.2 bits (107), Expect = 2e-05
Identities = 19/46 (41%), Positives = 33/46 (71%)
Frame = -2
Query: 571 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAQECI 434
+ KITI+ D ++S+EEI+RMV EAE++ +ED + +E + A+ +
Sbjct: 538 RSEKITISGDDRKISQEEIDRMVREAEEFADEDRRHREQVDARNSL 583
Score = 35.9 bits (79), Expect = 0.038
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = -1
Query: 644 KIEVTFDIDANGILNVSAIEKSTXQGEQ 561
+I VTF++DANGIL+V A +K+T + E+
Sbjct: 514 QIAVTFEVDANGILSVLAADKATGRSEK 541
>03_05_0877 + 28443481-28443538,28443641-28443911,28444028-28444242,
28444329-28445057,28445143-28445297,28445384-28445965
Length = 669
Score = 63.3 bits (147), Expect = 2e-10
Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 6/191 (3%)
Frame = -3
Query: 777 FENXXPEYSXQVFXG*ACYDPKITXXLGKFELTRDXHPAPRGVPQN*GHLRHRCQRYPQR 598
+E+ S +VF G K LG+F+L+ PAPRGVPQ +
Sbjct: 466 YEDHQTTVSIKVFEGERSLT-KDCRELGRFDLS-GIAPAPRGVPQI--EVTFEVDENGIL 521
Query: 597 FRYREVHQXRRTRSPLPTTKVVSPRKRSSVWLMRQRSTETRMTSKRRPSR--PKNALESY 424
R++S + T + + M + + E +R R +N LE+Y
Sbjct: 522 HVTASDKAAGRSKS-ITITNDKGRLSQEEIDRMVREAEEFAEEDRRVRERVDARNRLENY 580
Query: 423 CFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSN----QLADKEEYEHKQKELEG 256
+ M+S + D + KI D D++ + + ++WL+ N + A+KE+YE K KE+E
Sbjct: 581 VYRMRSAVRDGGMAGKIGDDDRERMESALTEALEWLEDNDGGARTAEKEDYEEKLKEVEQ 640
Query: 255 IYNPIITKMYQ 223
+ PII ++Y+
Sbjct: 641 VCGPIIKQVYK 651
Score = 55.2 bits (127), Expect = 6e-08
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = -2
Query: 571 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAQ 443
+ ITITNDKGRLS+EEI+RMV EAE++ ED + +E + A+
Sbjct: 532 RSKSITITNDKGRLSQEEIDRMVREAEEFAEEDRRVRERVDAR 574
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = -1
Query: 746 KYXEGERAMTQR*XXXSVNSS*PGXPTRRRVACLKIEVTFDIDANGILNVSAIEKSTXQG 567
K EGER++T+ P R V +IEVTF++D NGIL+V+A +K+ +
Sbjct: 476 KVFEGERSLTKDCRELGRFDLSGIAPAPRGVP--QIEVTFEVDENGILHVTASDKAAGRS 533
Query: 566 E 564
+
Sbjct: 534 K 534
>08_01_0654 - 5639419-5641449
Length = 676
Score = 62.5 bits (145), Expect = 4e-10
Identities = 26/74 (35%), Positives = 48/74 (64%)
Frame = -3
Query: 444 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKE 265
+N+LE+Y +++K+T+ K+ + + +K + + + +WLD N A KEEYE K +E
Sbjct: 580 RNSLEAYVYNIKNTLGG-KMADAMEGEEKDKVEEAVREAYEWLDGNPDAGKEEYEEKLRE 638
Query: 264 LEGIYNPIITKMYQ 223
LE + NP+++ +YQ
Sbjct: 639 LEDVCNPVMSAVYQ 652
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/46 (41%), Positives = 32/46 (69%)
Frame = -2
Query: 571 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAQECI 434
+ KITI+ D ++S+EEI+RMV EAE++ ED + +E + A+ +
Sbjct: 538 RSEKITISGDDRKISQEEIDRMVREAEEFAEEDRRHREQVDARNSL 583
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/28 (57%), Positives = 24/28 (85%)
Frame = -1
Query: 644 KIEVTFDIDANGILNVSAIEKSTXQGEQ 561
+IEVTF++DANGIL+V A +K+T + E+
Sbjct: 514 QIEVTFEVDANGILSVLAADKATGRSEK 541
>05_04_0052 - 17515344-17517353
Length = 669
Score = 59.7 bits (138), Expect = 3e-09
Identities = 25/80 (31%), Positives = 47/80 (58%)
Frame = -3
Query: 462 RRPSRPKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEY 283
R + +N+LE+Y + +K+ + ++ + +K+ + + +WLD NQ KEEY
Sbjct: 570 RERAGARNSLEAYVYGVKNAVVGGEMAGAMDGGEKEKVEAAVMEAYEWLDGNQDVGKEEY 629
Query: 282 EHKQKELEGIYNPIITKMYQ 223
E K +ELE + NP+++ +YQ
Sbjct: 630 EEKLRELEDVCNPVMSAVYQ 649
Score = 41.5 bits (93), Expect = 8e-04
Identities = 17/46 (36%), Positives = 31/46 (67%)
Frame = -2
Query: 571 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAQECI 434
+ +ITI+ D + S+EEI+RM+ EAE++ +ED + +E A+ +
Sbjct: 534 RSERITISGDDRKTSREEIDRMLGEAEEFADEDRRHRERAGARNSL 579
Score = 36.3 bits (80), Expect = 0.029
Identities = 23/62 (37%), Positives = 35/62 (56%)
Frame = -1
Query: 746 KYXEGERAMTQR*XXXSVNSS*PGXPTRRRVACLKIEVTFDIDANGILNVSAIEKSTXQG 567
K EGER+MT+ P R +IEV F++DA+GIL+VSA +++T +
Sbjct: 478 KVFEGERSMTRDNRLLGRFDLAGIAPAPRGAP--QIEVAFEVDADGILSVSAADRATGRS 535
Query: 566 EQ 561
E+
Sbjct: 536 ER 537
>03_02_0542 - 9348126-9349585,9352433-9352655
Length = 560
Score = 55.2 bits (127), Expect = 6e-08
Identities = 24/36 (66%), Positives = 31/36 (86%)
Frame = -2
Query: 571 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ 464
+ N ITI +DKGRLSKEEIERMV +AEKY+ ED+++
Sbjct: 515 RSNSITIKSDKGRLSKEEIERMVKKAEKYKAEDEEE 550
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = -1
Query: 644 KIEVTFDIDANGILNVSAIEKST 576
+I VTF ID NGI+NVSA +K+T
Sbjct: 491 QINVTFSIDYNGIMNVSAEDKTT 513
>11_01_0564 - 4447078-4448519,4449465-4449711
Length = 562
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/40 (52%), Positives = 30/40 (75%)
Frame = -2
Query: 571 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETI 452
++N ITITN GRL+KEEI+RM EAE+++ + KQ E +
Sbjct: 523 QKNSITITNRSGRLNKEEIDRMALEAERHKMKRIKQNEVV 562
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = -1
Query: 671 PTRRRVACLKIEVTFDIDANGILNVSAIEKSTXQ 570
P +RV I+VTFDIDANG+LNVSA K T Q
Sbjct: 492 PAPKRVP--SIDVTFDIDANGVLNVSAEHKVTGQ 523
>11_01_0563 + 4423609-4423846,4424671-4426132,4428949-4429364,
4430555-4432052,4432199-4432217,4432469-4432675,
4432814-4433065
Length = 1363
Score = 46.0 bits (104), Expect = 4e-05
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = -2
Query: 571 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAQECIGILLLQ 416
++N ITITN GRL KE++ERM EA Y + + + ++Q G L+LQ
Sbjct: 1165 RKNSITITNHSGRLKKEDVERMSREARSYNRKRKRTRSSLQINS--GNLMLQ 1214
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = -2
Query: 571 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ 464
++N I I+N GRL+KEEIERM EAE+Y+ + KQ
Sbjct: 1319 RKNNIIISNRSGRLNKEEIERMALEAERYKMKRIKQ 1354
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = -2
Query: 568 ENKITITNDKGRLSKEEIERMVNEAEKY 485
+N I ITN GRL KE++ERM EA Y
Sbjct: 532 KNNIAITNHSGRLKKEDVERMAREARSY 559
Score = 34.7 bits (76), Expect = 0.088
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = -1
Query: 638 EVTFDIDANGILNVSAIEKST 576
+VTFDID NG+LNV+A +K T
Sbjct: 1297 DVTFDIDGNGVLNVTAEDKDT 1317
Score = 31.9 bits (69), Expect = 0.62
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = -1
Query: 644 KIEVTFDIDANGILNVSAIEKST 576
+I+VTF+ DANG+L+VSA + T
Sbjct: 507 QIDVTFEFDANGVLHVSAKDMGT 529
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -1
Query: 644 KIEVTFDIDANGILNVSAIEKST 576
+I+ T +IDANG+L+VSA + T
Sbjct: 1141 RIDETLEIDANGVLHVSAEDMGT 1163
>02_05_0491 +
29470575-29471351,29471574-29471806,29472697-29472856,
29473149-29473394,29473492-29473628,29473874-29474207,
29474283-29474444,29474717-29474791,29474866-29474966,
29475042-29475111,29475210-29475266,29475357-29475418,
29475505-29475577,29475663-29475884
Length = 902
Score = 45.6 bits (103), Expect = 5e-05
Identities = 23/92 (25%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = -3
Query: 498 RQRSTETRMTSKRRPSRPKNALESYCFSMKSTMEDE-KLKEKISDSDKQTILDKCNDTIK 322
R + + + +RR + KN LESY +SMK +E+ ++ ++ ++++ +K N+
Sbjct: 652 RLEALDKKDAERRRTAELKNNLESYIYSMKEKLEENTEILTVSTEQERESFAEKLNEVQD 711
Query: 321 WL-DSNQLADKEEYEHKQKELEGIYNPIITKM 229
WL + A E++ + +L+ I +PI+ ++
Sbjct: 712 WLYMDGEDAQANEFKERLDQLKAIGDPILFRL 743
>02_05_0916 -
32706039-32706332,32707483-32708103,32708450-32709070,
32709183-32709752,32709840-32709918,32710002-32710075,
32711336-32711398
Length = 773
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = -1
Query: 644 KIEVTFDIDANGILNVSAIEKSTXQGEQ 561
+IEVTFDIDANGI+ VSA +KST + +Q
Sbjct: 516 QIEVTFDIDANGIVTVSAKDKSTGKEQQ 543
>11_01_0565 - 4457019-4457052,4457175-4458675,4460791-4460836
Length = 526
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = -2
Query: 568 ENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQ 449
+N TITN GRL KE++ERM EA Y + + + ++Q
Sbjct: 477 KNNNTITNHSGRLKKEDVERMSREARSYNRKRKRTRSSLQ 516
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -1
Query: 644 KIEVTFDIDANGILNVSAIEKST 576
+I+VTFD D NG+L+V A + T
Sbjct: 452 QIDVTFDFDTNGVLHVFAEDMGT 474
>03_01_0093 -
745434-746057,746492-747112,747222-747791,747870-747948,
748258-748331,748385-748387
Length = 656
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = -1
Query: 644 KIEVTFDIDANGILNVSAIEKSTXQGEQ 561
+IEVTFDIDANGI+ VSA +K+T + +Q
Sbjct: 496 QIEVTFDIDANGIVTVSAKDKATGKEQQ 523
>05_03_0397 +
13488642-13488941,13489711-13489963,13490594-13490673,
13491251-13491393,13491512-13491610,13491785-13491974,
13492504-13492902,13492993-13493400
Length = 623
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = -1
Query: 644 KIEVTFDIDANGILNVSAIEKSTXQGEQD 558
+IEV FDIDANGIL+VSA++K T + +QD
Sbjct: 448 QIEVKFDIDANGILSVSAVDKGTGK-KQD 475
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = -2
Query: 571 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAQECIGILLLQHE 410
K+ ITIT L K+E+E+MV EAEK+ ED ++++ I + ++ Q E
Sbjct: 472 KKQDITITG-ASTLPKDEVEKMVEEAEKFAKEDKEKRDAIDTKNQAESVIYQTE 524
>01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165
Length = 648
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -3
Query: 342 KCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPI 241
K +WLD N A+KE+YE K KELE P+
Sbjct: 602 KARAASEWLDGNPAAEKEDYEEKLKELEDACGPV 635
Score = 35.1 bits (77), Expect = 0.066
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = -2
Query: 547 NDKGRLSKEEIERMVNE-AEKYRNEDDKQKETIQAQECIGILLLQHEVYHGG 395
++ GRLSKEEI+RM+ E AE E+ KE + A + ++++ GG
Sbjct: 544 HEHGRLSKEEIDRMIREVAEDLVEEERIVKERVDALNMLETYIVKNTAVTGG 595
>01_01_0573 +
4253484-4254653,4255526-4255735,4255842-4255937,
4256034-4256255,4256829-4257023,4257097-4257243,
4257323-4257472,4257762-4257892,4257978-4258194
Length = 845
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = -3
Query: 444 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL-DSNQLADKEEYEHKQK 268
KNA+ESY + M++ + D K + ++ DK+ + K + WL + + K Y K +
Sbjct: 618 KNAVESYVYDMRNKLYD-KYNDFVTAEDKEAFIAKLQEVEDWLYEDGEDETKGVYVAKLE 676
Query: 267 ELEGIYNPI 241
EL+ + PI
Sbjct: 677 ELKKVGGPI 685
>06_03_1137 +
27903012-27904196,27904330-27904542,27905775-27905867,
27905940-27906008,27906412-27906612,27906688-27906834,
27907524-27907652,27909001-27909131,27909240-27909333
Length = 753
Score = 35.5 bits (78), Expect = 0.050
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = -3
Query: 459 RPSRPKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL-DSNQLADKEEY 283
R KNALESY + ++ + E+ + +DS+++ I T WL + + Y
Sbjct: 569 RTKERKNALESYVYDTRNKL-SERYRSFATDSEREEISLSLQQTEDWLYEEGDDETEAVY 627
Query: 282 EHKQKELEGIYNPI 241
K +EL+ + +PI
Sbjct: 628 NSKLEELKRLVDPI 641
>01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819
Length = 539
Score = 35.1 bits (77), Expect = 0.066
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = -2
Query: 544 DKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAQECI 434
++ +LSKEEIERM EA++Y D+ +KE I+A+ +
Sbjct: 500 EQSQLSKEEIERMTMEAKEYMAADE-EKERIKAKNLL 535
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -1
Query: 698 SVNSS*PGXPTRRRVAC-LKIEVTFDIDANGILNVSAIEKSTXQGEQDHHYQRQRSSLQG 522
S S PG ++ + L + V F IDA+G+L VSA +K Q ++ + S +
Sbjct: 449 SARSKLPGAHSKAKPGVKLSVSVCFSIDADGVLTVSARDKVNGHKNQMRVMEQSQLSKEE 508
Query: 521 RDR 513
+R
Sbjct: 509 IER 511
>05_01_0550 +
4820086-4821255,4822112-4822321,4822429-4822524,
4822610-4822828,4823201-4823395,4823466-4823612,
4823712-4823861,4825015-4825145,4825234-4825477
Length = 853
Score = 32.7 bits (71), Expect = 0.35
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = -3
Query: 444 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL-DSNQLADKEEYEHKQK 268
KNA+E+Y + M++ + D K + + K+ + K + WL + + K Y K +
Sbjct: 617 KNAVEAYVYDMRNKLYD-KYNDFVMSEYKEGFIAKLQEVEDWLYEDGEDETKGVYIAKLE 675
Query: 267 ELEGIYNPI 241
EL+ + +PI
Sbjct: 676 ELKKVGDPI 684
>03_01_0009 -
89127-89924,90090-90518,90582-90716,91102-91382,
91634-91809,91899-92011,92157-92278,92375-92594
Length = 757
Score = 31.5 bits (68), Expect = 0.82
Identities = 14/66 (21%), Positives = 35/66 (53%)
Frame = -3
Query: 453 SRPKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHK 274
SR + ++ C+ + + ++++E+ + Q+ LDK ND ++ +++ A ++ H
Sbjct: 336 SRQASKVDLICYQRMAELAAKRMEEEAQLREIQSRLDKANDNVEKQKAHRYAAEQALNHV 395
Query: 273 QKELEG 256
Q + G
Sbjct: 396 QDLVRG 401
>03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = -3
Query: 417 SMKST--MEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNP 244
SMK + ++ +K EK+S + Q ++ + ++ K + Q+ D +E EHK KE+ + N
Sbjct: 856 SMKDSALLQQQKSSEKVSYLEAQVLVVR-SEMEKMVQKTQMLD-QELEHKNKEISELQNS 913
Query: 243 I 241
+
Sbjct: 914 L 914
>01_01_0862 +
6714041-6714358,6714462-6714603,6715511-6715735,
6715769-6716763,6717327-6717381,6717469-6717621,
6718130-6718299,6718388-6718870
Length = 846
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = -3
Query: 621 RCQRYPQRFRYREVHQXRRTRSPLPTTKV---VSPRKRSSVWLMRQRSTETRMTSKRRPS 451
R +R+PQ F ++ + R+++S + TTK+ S +R + +ST TR S+ RP
Sbjct: 746 RQERHPQAFGCKQASKQRKSKSTMITTKLTIATSMNRRRGKMIGPTKST-TRRPSQLRPV 804
Query: 450 RPKNALESY 424
+E Y
Sbjct: 805 GWPKKVEPY 813
>08_02_0274 -
15192670-15192983,15193110-15193200,15193295-15193603,
15193859-15193944,15196034-15196088,15196689-15196757,
15197027-15197074,15198090-15198203,15198464-15198526,
15199236-15199427,15199519-15199643,15199723-15199779,
15200209-15200332,15200478-15200543,15200656-15200738,
15200916-15201036,15201663-15201773,15201841-15201936,
15202032-15202107,15202878-15203016,15203283-15203346,
15203454-15203527,15203845-15203923,15204473-15204547
Length = 876
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -2
Query: 580 PPXKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAQECIGI 428
PP K++K + G +S+ +ER NE+ R E D+ KE +Q E G+
Sbjct: 781 PPPKKSK-NMEYYVGCVSESMLERSRNESSVLRGEQDEIKELLQLVEEDGV 830
>02_05_1189 +
34839840-34840106,34840228-34840346,34841025-34841217,
34841245-34841364,34841660-34841775,34842527-34842875,
34843279-34843542,34843640-34843758,34843929-34844313
Length = 643
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = -3
Query: 660 PRGVPQN*GHLRHRCQRYPQRFRYREVHQXRRTRSPLPTTKVVSPRKRSSVWLMRQRSTE 481
PRG+P+ R R P R+ H R + PL + PRK S+WL R++ +
Sbjct: 49 PRGLPRL---ARRELPRSPPPPPSRKAHFLRLSAGPL-----LLPRKLMSMWLDREKGAK 100
Query: 480 TRMTSKR 460
M S R
Sbjct: 101 CYMLSAR 107
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 544 DKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAQE 440
++ RL KEE ER EA++ + E +K+K + QE
Sbjct: 454 EEERLKKEEEERKAEEAKRRKKEREKEKLLKKKQE 488
>01_06_1570 + 38312319-38314259
Length = 646
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -3
Query: 564 TRSPLPTTKVVSPRKRSSVWLMRQ---RSTETRMTSKRRPSRPKNALESYCFSM 412
T P+ + +VS VW RQ RS R++ +RR SRP+ + S FS+
Sbjct: 250 TAIPVASALLVSVIAALLVWRRRQDSIRSKSRRLSGERRLSRPRPNVGSVLFSL 303
>01_06_0931 -
33139383-33139580,33139748-33139870,33142520-33142891,
33143380-33143450,33143769-33143810,33143895-33143967,
33144518-33144679,33144778-33144878,33144992-33145114,
33145296-33145689
Length = 552
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 325 DGVVALVEDGLLVRVRDLFLELLILHGRLHAEAVRFQCILGPGWS 459
DG+V + DG+LV V D F ++L+ R + + + C+ G++
Sbjct: 193 DGIVCVSGDGVLVEV-DFFTDILVYPFRGMRKRLAYDCVKRKGYT 236
>02_03_0360 + 18104948-18106159
Length = 403
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = -2
Query: 538 GRLSKEEIERMVNEAEKYRNEDDKQKETIQ 449
GR +EE+E M EAE+ + E +K++E ++
Sbjct: 167 GRGGEEEVEEMRREAERAQEELEKEREMLR 196
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -2
Query: 544 DKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAQE 440
++ RL +EE ERMV E + + E DK K + Q+
Sbjct: 202 EEERLQREEDERMVEEMKMQQKERDKGKTMKKRQD 236
>12_02_1167 +
26647293-26648356,26648493-26648577,26649129-26649191,
26649381-26649443,26649987-26650070,26650229-26650783
Length = 637
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 207 GLLRHPGTSS*LSDCKCLPILSACAHTPPCRPA 305
GL P T+S LP +ACA TPP + A
Sbjct: 588 GLPTPPSTTSNAGKLPSLPAATACATTPPVKTA 620
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/64 (26%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = -3
Query: 420 FSMKSTMEDEKLKEK-ISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNP 244
+ + + E +K++E I D + IL++ + ++ + ++ DK +HK+++LE YN
Sbjct: 45 YQISNKKERKKVREVGILKKDPEAILEQI-EKLEKMKADGALDKAR-KHKKRQLEDTYNL 102
Query: 243 IITK 232
I+ K
Sbjct: 103 IVKK 106
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,224,786
Number of Sequences: 37544
Number of extensions: 403652
Number of successful extensions: 1361
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1354
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -