Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_K11
         (869 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118856-1|AAM50716.1|  234|Drosophila melanogaster GM21245p pro...   103   3e-22
AY051920-1|AAK93344.1|  515|Drosophila melanogaster LD40565p pro...   103   3e-22
AE014134-1359|AAF52575.2|  515|Drosophila melanogaster CG7102-PA...   103   3e-22
U04435-1|AAA18958.1|  609|Drosophila melanogaster GLI-Kr zinc fi...    29   6.3  
BT029391-1|ABK56895.1|  609|Drosophila melanogaster FI01113p pro...    29   6.3  
AY051783-1|AAK93207.1|  609|Drosophila melanogaster LD30441p pro...    29   6.3  
AE014297-163|AAF52084.1|  609|Drosophila melanogaster CG1133-PA ...    29   6.3  

>AY118856-1|AAM50716.1|  234|Drosophila melanogaster GM21245p
           protein.
          Length = 234

 Score =  103 bits (247), Expect = 3e-22
 Identities = 48/69 (69%), Positives = 56/69 (81%), Gaps = 5/69 (7%)
 Frame = -3

Query: 300 AERAFLFALS----EPPARHPLLKKPFALCYHPDCGPIFGAGADLFISSNCNTNCDSYSN 133
           +ERAFLFAL+    E P +  ++KKP+A+CYHPDCGPIFGAGADL ISSNCNTN DSYSN
Sbjct: 105 SERAFLFALNPANGEQPVKFDIVKKPYAICYHPDCGPIFGAGADLLISSNCNTNMDSYSN 164

Query: 132 L-HSXRGSN 109
           L HS  G+N
Sbjct: 165 LPHSYDGTN 173



 Score = 57.6 bits (133), Expect = 2e-08
 Identities = 27/69 (39%), Positives = 34/69 (49%)
 Frame = -2

Query: 565 VNXXXXXXIXXQDKSXXQSVXNXWXGXPXQXXRXXFRAXTHGXSXQAFHSHCDGISPVLL 386
           VN      I   D    Q+V N W G   Q  R  FRA THG    AFH +CDG++P ++
Sbjct: 16  VNMFPGSQILKNDNLPLQTVLNNWVGVAKQSWRLVFRASTHGYDSGAFHRYCDGVAPCMV 75

Query: 385 XXQLSRGEV 359
               S GE+
Sbjct: 76  IGLGSHGEI 84



 Score = 29.5 bits (63), Expect = 6.3
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -1

Query: 119 GDPIAPASLASEYNFTVLDYEIFT 48
           G   A  +L  +YNFT+ DYE++T
Sbjct: 171 GTNAAHLTLFGDYNFTITDYEVYT 194


>AY051920-1|AAK93344.1|  515|Drosophila melanogaster LD40565p
           protein.
          Length = 515

 Score =  103 bits (247), Expect = 3e-22
 Identities = 48/69 (69%), Positives = 56/69 (81%), Gaps = 5/69 (7%)
 Frame = -3

Query: 300 AERAFLFALS----EPPARHPLLKKPFALCYHPDCGPIFGAGADLFISSNCNTNCDSYSN 133
           +ERAFLFAL+    E P +  ++KKP+A+CYHPDCGPIFGAGADL ISSNCNTN DSYSN
Sbjct: 386 SERAFLFALNPANGEQPVKFDIVKKPYAICYHPDCGPIFGAGADLLISSNCNTNMDSYSN 445

Query: 132 L-HSXRGSN 109
           L HS  G+N
Sbjct: 446 LPHSYDGTN 454



 Score = 57.2 bits (132), Expect = 3e-08
 Identities = 27/69 (39%), Positives = 34/69 (49%)
 Frame = -2

Query: 565 VNXXXXXXIXXQDKSXXQSVXNXWXGXPXQXXRXXFRAXTHGXSXQAFHSHCDGISPVLL 386
           VN      I   D    Q+V N W G   Q  R  FRA THG    AFH +CDG++P ++
Sbjct: 297 VNMFPGSQILKNDNLALQTVLNNWVGVGKQSWRLVFRASTHGYDSGAFHRYCDGVAPCMV 356

Query: 385 XXQLSRGEV 359
               S GE+
Sbjct: 357 IGLGSHGEI 365



 Score = 29.5 bits (63), Expect = 6.3
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -1

Query: 119 GDPIAPASLASEYNFTVLDYEIFT 48
           G   A  +L  +YNFT+ DYE++T
Sbjct: 452 GTNAAHLTLFGDYNFTITDYEVYT 475


>AE014134-1359|AAF52575.2|  515|Drosophila melanogaster CG7102-PA
           protein.
          Length = 515

 Score =  103 bits (247), Expect = 3e-22
 Identities = 48/69 (69%), Positives = 56/69 (81%), Gaps = 5/69 (7%)
 Frame = -3

Query: 300 AERAFLFALS----EPPARHPLLKKPFALCYHPDCGPIFGAGADLFISSNCNTNCDSYSN 133
           +ERAFLFAL+    E P +  ++KKP+A+CYHPDCGPIFGAGADL ISSNCNTN DSYSN
Sbjct: 386 SERAFLFALNPANGEQPVKFDIVKKPYAICYHPDCGPIFGAGADLLISSNCNTNMDSYSN 445

Query: 132 L-HSXRGSN 109
           L HS  G+N
Sbjct: 446 LPHSYDGTN 454



 Score = 57.2 bits (132), Expect = 3e-08
 Identities = 27/69 (39%), Positives = 34/69 (49%)
 Frame = -2

Query: 565 VNXXXXXXIXXQDKSXXQSVXNXWXGXPXQXXRXXFRAXTHGXSXQAFHSHCDGISPVLL 386
           VN      I   D    Q+V N W G   Q  R  FRA THG    AFH +CDG++P ++
Sbjct: 297 VNMFPGSQILKNDNLALQTVLNNWVGVGKQSWRLVFRASTHGYDSGAFHRYCDGVAPCMV 356

Query: 385 XXQLSRGEV 359
               S GE+
Sbjct: 357 IGLGSHGEI 365



 Score = 29.5 bits (63), Expect = 6.3
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -1

Query: 119 GDPIAPASLASEYNFTVLDYEIFT 48
           G   A  +L  +YNFT+ DYE++T
Sbjct: 452 GTNAAHLTLFGDYNFTITDYEVYT 475


>U04435-1|AAA18958.1|  609|Drosophila melanogaster GLI-Kr zinc
           finger pair-rule proteinprotein.
          Length = 609

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 243 KKPFALCYHPDCGPIFGAGADLFISSNCNT 154
           +KPFA C HP CG +F    +L I    +T
Sbjct: 288 EKPFA-CPHPGCGKVFARSENLKIHKRTHT 316


>BT029391-1|ABK56895.1|  609|Drosophila melanogaster FI01113p
           protein.
          Length = 609

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 243 KKPFALCYHPDCGPIFGAGADLFISSNCNT 154
           +KPFA C HP CG +F    +L I    +T
Sbjct: 288 EKPFA-CPHPGCGKVFARSENLKIHKRTHT 316


>AY051783-1|AAK93207.1|  609|Drosophila melanogaster LD30441p
           protein.
          Length = 609

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 243 KKPFALCYHPDCGPIFGAGADLFISSNCNT 154
           +KPFA C HP CG +F    +L I    +T
Sbjct: 288 EKPFA-CPHPGCGKVFARSENLKIHKRTHT 316


>AE014297-163|AAF52084.1|  609|Drosophila melanogaster CG1133-PA
           protein.
          Length = 609

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 243 KKPFALCYHPDCGPIFGAGADLFISSNCNT 154
           +KPFA C HP CG +F    +L I    +T
Sbjct: 288 EKPFA-CPHPGCGKVFARSENLKIHKRTHT 316


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,701,181
Number of Sequences: 53049
Number of extensions: 166473
Number of successful extensions: 947
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)