Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_K09
(801 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL034488-12|CAD31697.1| 450|Caenorhabditis elegans Hypothetical... 31 1.3
Z83241-2|CAB05816.2| 435|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 28 6.8
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 28 6.8
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 28 6.8
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 28 6.8
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 28 6.8
U39667-2|AAQ91910.1| 426|Caenorhabditis elegans Xo lethal prote... 28 6.8
L35129-1|AAA67047.1| 426|Caenorhabditis elegans xol-1 protein. 28 6.8
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 28 8.9
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 28 8.9
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 28 8.9
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 28 8.9
>AL034488-12|CAD31697.1| 450|Caenorhabditis elegans Hypothetical
protein Y54G11A.14 protein.
Length = 450
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -3
Query: 763 EDDEGMVGDDPAAYLTNEAHDAPVGDEIASTAEPDATEHSVP 638
+DDEG++GDD E + +++A + +A + +VP
Sbjct: 210 DDDEGVMGDDDEEEEEEEEEEEEEEEDVADVVDAEAIDDAVP 251
>Z83241-2|CAB05816.2| 435|Caenorhabditis elegans Hypothetical
protein T25C8.1 protein.
Length = 435
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 582 RTTTKPDFNKRGAPTCRWRGTECSVASGSAVDAISS 689
+T PD N + W G +C VASG +++S
Sbjct: 206 KTLKLPDINSSSEVSGTWHGAKCHVASGDLQASVAS 241
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.3 bits (60), Expect = 6.8
Identities = 8/34 (23%), Positives = 19/34 (55%)
Frame = +3
Query: 603 FNKRGAPTCRWRGTECSVASGSAVDAISSPTGAS 704
F AP +W+ + ++ +G+ D ++PT ++
Sbjct: 3352 FEGEPAPVAKWKANDATIDTGARADVTNTPTSSA 3385
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.3 bits (60), Expect = 6.8
Identities = 8/34 (23%), Positives = 19/34 (55%)
Frame = +3
Query: 603 FNKRGAPTCRWRGTECSVASGSAVDAISSPTGAS 704
F AP +W+ + ++ +G+ D ++PT ++
Sbjct: 3881 FEGEPAPVAKWKANDATIDTGARADVTNTPTSSA 3914
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 28.3 bits (60), Expect = 6.8
Identities = 8/34 (23%), Positives = 19/34 (55%)
Frame = +3
Query: 603 FNKRGAPTCRWRGTECSVASGSAVDAISSPTGAS 704
F AP +W+ + ++ +G+ D ++PT ++
Sbjct: 3562 FEGEPAPVAKWKANDATIDTGARADVTNTPTSSA 3595
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 28.3 bits (60), Expect = 6.8
Identities = 8/34 (23%), Positives = 19/34 (55%)
Frame = +3
Query: 603 FNKRGAPTCRWRGTECSVASGSAVDAISSPTGAS 704
F AP +W+ + ++ +G+ D ++PT ++
Sbjct: 3352 FEGEPAPVAKWKANDATIDTGARADVTNTPTSSA 3385
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 28.3 bits (60), Expect = 6.8
Identities = 8/34 (23%), Positives = 19/34 (55%)
Frame = +3
Query: 603 FNKRGAPTCRWRGTECSVASGSAVDAISSPTGAS 704
F AP +W+ + ++ +G+ D ++PT ++
Sbjct: 3881 FEGEPAPVAKWKANDATIDTGARADVTNTPTSSA 3914
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 28.3 bits (60), Expect = 6.8
Identities = 8/34 (23%), Positives = 19/34 (55%)
Frame = +3
Query: 603 FNKRGAPTCRWRGTECSVASGSAVDAISSPTGAS 704
F AP +W+ + ++ +G+ D ++PT ++
Sbjct: 3562 FEGEPAPVAKWKANDATIDTGARADVTNTPTSSA 3595
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 28.3 bits (60), Expect = 6.8
Identities = 8/34 (23%), Positives = 19/34 (55%)
Frame = +3
Query: 603 FNKRGAPTCRWRGTECSVASGSAVDAISSPTGAS 704
F AP +W+ + ++ +G+ D ++PT ++
Sbjct: 2771 FEGEPAPVAKWKANDATIDTGARADVTNTPTSSA 2804
>U39667-2|AAQ91910.1| 426|Caenorhabditis elegans Xo lethal protein
1, isoform c protein.
Length = 426
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -1
Query: 210 YFNTNRNFMYYVI*QLKCIPSGHIIRNSVL 121
+F+T R F+ Y+ KC P HI ++++L
Sbjct: 384 HFSTGRTFLSYLSIIAKCTPISHINQSNIL 413
>L35129-1|AAA67047.1| 426|Caenorhabditis elegans xol-1 protein.
Length = 426
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -1
Query: 210 YFNTNRNFMYYVI*QLKCIPSGHIIRNSVL 121
+F+T R F+ Y+ KC P HI ++++L
Sbjct: 384 HFSTGRTFLSYLSIIAKCTPISHINQSNIL 413
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 793 PEGRPTQGPYEDDEGMVGDDPAAYLTNEAHDAPVGDEIASTAEPDATE-HSVPRQRHVGA 617
PEG+ + P + D ++PAA L +A G E+ T + A+E SVP A
Sbjct: 263 PEGKRPRTPNDLDNPTADEEPAAEL-----EADAGSEVPPTPKTAASEKQSVPPTPKSAA 317
Query: 616 P 614
P
Sbjct: 318 P 318
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 793 PEGRPTQGPYEDDEGMVGDDPAAYLTNEAHDAPVGDEIASTAEPDATE-HSVPRQRHVGA 617
PEG+ + P + D ++PAA L +A G E+ T + A+E SVP A
Sbjct: 213 PEGKRPRTPNDLDNPTADEEPAAEL-----EADAGSEVPPTPKTAASEKQSVPPTPKSAA 267
Query: 616 P 614
P
Sbjct: 268 P 268
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 793 PEGRPTQGPYEDDEGMVGDDPAAYLTNEAHDAPVGDEIASTAEPDATE-HSVPRQRHVGA 617
PEG+ + P + D ++PAA L +A G E+ T + A+E SVP A
Sbjct: 263 PEGKRPRTPNDLDNPTADEEPAAEL-----EADAGSEVPPTPKTAASEKQSVPPTPKSAA 317
Query: 616 P 614
P
Sbjct: 318 P 318
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 793 PEGRPTQGPYEDDEGMVGDDPAAYLTNEAHDAPVGDEIASTAEPDATE-HSVPRQRHVGA 617
PEG+ + P + D ++PAA L +A G E+ T + A+E SVP A
Sbjct: 263 PEGKRPRTPNDLDNPTADEEPAAEL-----EADAGSEVPPTPKTAASEKQSVPPTPKSAA 317
Query: 616 P 614
P
Sbjct: 318 P 318
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,907,830
Number of Sequences: 27780
Number of extensions: 272409
Number of successful extensions: 611
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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