Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_K06
(803 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 172 2e-43
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 172 2e-43
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 172 2e-43
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 172 2e-43
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 172 2e-43
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 172 2e-43
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 171 4e-43
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 171 4e-43
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 171 4e-43
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 171 4e-43
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 157 9e-39
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 93 2e-19
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 88 8e-18
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 79 4e-15
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 55 7e-08
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 53 2e-07
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 32 0.42
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.73
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.73
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.73
Z68303-12|CAA92644.2| 969|Caenorhabditis elegans Hypothetical p... 28 6.8
Z68303-1|CAC42387.1| 475|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z68302-9|CAA92636.2| 969|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 9.0
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 9.0
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 9.0
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 9.0
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 172 bits (419), Expect = 2e-43
Identities = 79/94 (84%), Positives = 83/94 (88%)
Frame = -1
Query: 785 EKLWYVXLDFEQEMATXAXXXXXEKSYXFPDGQVITIGNERFRCPEALFQPSFLGMEACG 606
EKL YV LDFEQEMAT A EKSY PDGQVIT+GNERFRCPEALFQPSFLGME+ G
Sbjct: 215 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 274
Query: 605 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 504
IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 275 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Score = 145 bits (352), Expect = 3e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -2
Query: 502 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 323
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 322 SIVHRKCF 299
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 172 bits (419), Expect = 2e-43
Identities = 79/94 (84%), Positives = 83/94 (88%)
Frame = -1
Query: 785 EKLWYVXLDFEQEMATXAXXXXXEKSYXFPDGQVITIGNERFRCPEALFQPSFLGMEACG 606
EKL YV LDFEQEMAT A EKSY PDGQVIT+GNERFRCPEALFQPSFLGME+ G
Sbjct: 215 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 274
Query: 605 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 504
IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 275 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Score = 145 bits (352), Expect = 3e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -2
Query: 502 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 323
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 322 SIVHRKCF 299
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 172 bits (419), Expect = 2e-43
Identities = 79/94 (84%), Positives = 83/94 (88%)
Frame = -1
Query: 785 EKLWYVXLDFEQEMATXAXXXXXEKSYXFPDGQVITIGNERFRCPEALFQPSFLGMEACG 606
EKL YV LDFEQEMAT A EKSY PDGQVIT+GNERFRCPEALFQPSFLGME+ G
Sbjct: 215 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 274
Query: 605 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 504
IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 275 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Score = 145 bits (352), Expect = 3e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -2
Query: 502 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 323
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 322 SIVHRKCF 299
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 172 bits (419), Expect = 2e-43
Identities = 79/94 (84%), Positives = 83/94 (88%)
Frame = -1
Query: 785 EKLWYVXLDFEQEMATXAXXXXXEKSYXFPDGQVITIGNERFRCPEALFQPSFLGMEACG 606
EKL YV LDFEQEMAT A EKSY PDGQVIT+GNERFRCPEALFQPSFLGME+ G
Sbjct: 171 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 230
Query: 605 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 504
IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 231 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 264
Score = 145 bits (352), Expect = 3e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -2
Query: 502 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 323
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 265 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 324
Query: 322 SIVHRKCF 299
SIVHRKCF
Sbjct: 325 SIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 172 bits (419), Expect = 2e-43
Identities = 79/94 (84%), Positives = 83/94 (88%)
Frame = -1
Query: 785 EKLWYVXLDFEQEMATXAXXXXXEKSYXFPDGQVITIGNERFRCPEALFQPSFLGMEACG 606
EKL YV LDFEQEMAT A EKSY PDGQVIT+GNERFRCPEALFQPSFLGME+ G
Sbjct: 201 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 260
Query: 605 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 504
IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 261 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 294
Score = 145 bits (352), Expect = 3e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -2
Query: 502 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 323
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 295 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 354
Query: 322 SIVHRKCF 299
SIVHRKCF
Sbjct: 355 SIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 172 bits (419), Expect = 2e-43
Identities = 79/94 (84%), Positives = 83/94 (88%)
Frame = -1
Query: 785 EKLWYVXLDFEQEMATXAXXXXXEKSYXFPDGQVITIGNERFRCPEALFQPSFLGMEACG 606
EKL YV LDFEQEMAT A EKSY PDGQVIT+GNERFRCPEALFQPSFLGME+ G
Sbjct: 215 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 274
Query: 605 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 504
IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 275 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Score = 145 bits (352), Expect = 3e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -2
Query: 502 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 323
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 322 SIVHRKCF 299
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 171 bits (417), Expect = 4e-43
Identities = 78/94 (82%), Positives = 83/94 (88%)
Frame = -1
Query: 785 EKLWYVXLDFEQEMATXAXXXXXEKSYXFPDGQVITIGNERFRCPEALFQPSFLGMEACG 606
EKL YV LDFEQEMAT A EKSY PDGQVIT+GNERFRCPEA+FQPSFLGME+ G
Sbjct: 215 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAG 274
Query: 605 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 504
IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 275 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Score = 145 bits (352), Expect = 3e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -2
Query: 502 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 323
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 322 SIVHRKCF 299
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 171 bits (417), Expect = 4e-43
Identities = 78/94 (82%), Positives = 83/94 (88%)
Frame = -1
Query: 785 EKLWYVXLDFEQEMATXAXXXXXEKSYXFPDGQVITIGNERFRCPEALFQPSFLGMEACG 606
EKL YV LDFEQEMAT A EKSY PDGQVIT+GNERFRCPEA+FQPSFLGME+ G
Sbjct: 215 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAG 274
Query: 605 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 504
IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 275 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Score = 145 bits (352), Expect = 3e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -2
Query: 502 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 323
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 322 SIVHRKCF 299
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 171 bits (417), Expect = 4e-43
Identities = 78/94 (82%), Positives = 83/94 (88%)
Frame = -1
Query: 785 EKLWYVXLDFEQEMATXAXXXXXEKSYXFPDGQVITIGNERFRCPEALFQPSFLGMEACG 606
EKL YV LDFEQEMAT A EKSY PDGQVIT+GNERFRCPEA+FQPSFLGME+ G
Sbjct: 215 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAG 274
Query: 605 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 504
IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 275 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Score = 139 bits (337), Expect = 2e-33
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = -2
Query: 502 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 323
GIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 367
Query: 322 SIVHRKCF 299
SIVHRKCF
Sbjct: 368 SIVHRKCF 375
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 171 bits (417), Expect = 4e-43
Identities = 78/94 (82%), Positives = 83/94 (88%)
Frame = -1
Query: 785 EKLWYVXLDFEQEMATXAXXXXXEKSYXFPDGQVITIGNERFRCPEALFQPSFLGMEACG 606
EKL YV LDFEQEMAT A EKSY PDGQVIT+GNERFRCPEA+FQPSFLGME+ G
Sbjct: 215 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAG 274
Query: 605 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 504
IHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYP
Sbjct: 275 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYP 308
Score = 145 bits (352), Expect = 3e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -2
Query: 502 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 323
GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 309 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 368
Query: 322 SIVHRKCF 299
SIVHRKCF
Sbjct: 369 SIVHRKCF 376
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 157 bits (381), Expect = 9e-39
Identities = 72/94 (76%), Positives = 77/94 (81%)
Frame = -1
Query: 785 EKLWYVXLDFEQEMATXAXXXXXEKSYXFPDGQVITIGNERFRCPEALFQPSFLGMEACG 606
EKL YV DFE E+A A EKSY PDGQVITIGNERFRCPE LFQP+F+GME G
Sbjct: 214 EKLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAG 273
Query: 605 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 504
IHETTY SIMKCDVDIRKDLYANTVLSGGT+M+P
Sbjct: 274 IHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFP 307
Score = 140 bits (340), Expect = 8e-34
Identities = 66/68 (97%), Positives = 66/68 (97%)
Frame = -2
Query: 502 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 323
GIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP
Sbjct: 308 GIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 367
Query: 322 SIVHRKCF 299
SIVHRKCF
Sbjct: 368 SIVHRKCF 375
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 93.5 bits (222), Expect = 2e-19
Identities = 43/94 (45%), Positives = 53/94 (56%)
Frame = -1
Query: 785 EKLWYVXLDFEQEMATXAXXXXXEKSYXFPDGQVITIGNERFRCPEALFQPSFLGMEACG 606
EKL Y+ D EQE + Y PDG+VI +G ERF PE LFQP + +E G
Sbjct: 218 EKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAG 277
Query: 605 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 504
+ E + I D+D R D Y + VLSGGTTMYP
Sbjct: 278 LSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYP 311
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/43 (51%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Frame = -2
Query: 448 KIKIIAPPERKYSVWIGGSILASL--STFQQMWISKQEYDESG 326
KI+I APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 341 KIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 87.8 bits (208), Expect = 8e-18
Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
Frame = -2
Query: 502 GIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKQEYDE 332
G +R+ + P T+K+++ A P ERKY WIGGSIL SL TFQQMW+SK EYDE
Sbjct: 366 GFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQMWVSKAEYDE 425
Query: 331 SGPSIVHRKC 302
SG SIV +KC
Sbjct: 426 SGKSIVEKKC 435
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Frame = -1
Query: 707 YXFPDGQVITIGNERFRCPEALFQPSFLGMEA-----CGIHETTYNSIMKCDVDIRKDLY 543
Y FP+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 542 ANTVLSGGTTM 510
+N ++GG ++
Sbjct: 353 SNVTVTGGNSL 363
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 79.0 bits (186), Expect = 4e-15
Identities = 36/70 (51%), Positives = 45/70 (64%)
Frame = -1
Query: 716 EKSYXFPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYAN 537
+ SY PD I I N FR PE LF+P +G E G+ SIMKCDVD+R+ LY+N
Sbjct: 236 KSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSN 295
Query: 536 TVLSGGTTMY 507
VLSGGTT++
Sbjct: 296 IVLSGGTTLF 305
Score = 74.5 bits (175), Expect = 8e-14
Identities = 32/68 (47%), Positives = 47/68 (69%)
Frame = -2
Query: 502 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 323
G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G
Sbjct: 307 GFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGA 366
Query: 322 SIVHRKCF 299
S +H++ F
Sbjct: 367 SAMHKRFF 374
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 60.1 bits (139), Expect = 2e-09
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Frame = -1
Query: 785 EKLWYVXLDFEQEMATXAXXXXXEKSYXFPDGQVIT---IGNERFRCPEALFQPSFLGME 615
E+ YV D+++E + P + T I N RF C E LF+P G++
Sbjct: 389 EQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGLFKPKKWGLD 448
Query: 614 ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 504
G+H+ + +I++C +D R+ LY N L+GG ++ P
Sbjct: 449 TKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMP 485
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/54 (33%), Positives = 36/54 (66%)
Frame = -2
Query: 502 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 341
GIA+++++E++ + P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 486 GIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 54.8 bits (126), Expect = 7e-08
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = -1
Query: 683 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 507
+ +G ERF PE F P F E I +T I +C +D+R+ LY N VLSGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Score = 51.2 bits (117), Expect = 8e-07
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = -2
Query: 466 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 317
L P + +++I+ ++Y+VW GGS+LAS S F Q+ +K EY E GPSI
Sbjct: 365 LKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/77 (33%), Positives = 40/77 (51%)
Frame = -1
Query: 683 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 504
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 503 WNRRPYAKGNHSSRPID 453
R + S P +
Sbjct: 323 GFRERLEREVRSMLPAE 339
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/77 (33%), Positives = 40/77 (51%)
Frame = -1
Query: 683 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 504
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 503 WNRRPYAKGNHSSRPID 453
R + S P +
Sbjct: 323 GFRERLEREVRSMLPAE 339
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 32.3 bits (70), Expect = 0.42
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -1
Query: 581 IMKCDVDIRKDLYANTVLSGGTTMYP 504
+ KC +D+RK L+ N +L+GG + P
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIP 223
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.73
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 404 PYGVLPLWRSNDLNLHCRWGESCD 475
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.73
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 404 PYGVLPLWRSNDLNLHCRWGESCD 475
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.73
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 404 PYGVLPLWRSNDLNLHCRWGESCD 475
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z68303-12|CAA92644.2| 969|Caenorhabditis elegans Hypothetical
protein ZK792.1a protein.
Length = 969
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/62 (27%), Positives = 24/62 (38%)
Frame = +2
Query: 332 LVVLLFRDPHLLEGREGGEDRSTDPYGVLPLWRSNDLNLHCRWGESCDFLLHTVGDSRGT 511
LVV+ +L E ++D P+W+ D+ E C FL H V G
Sbjct: 22 LVVIFITIYTILHNESDNEIETSDVQLEKPIWKKEDIR------EMCQFLEHEVTGEEGD 75
Query: 512 WW 517
W
Sbjct: 76 QW 77
>Z68303-1|CAC42387.1| 475|Caenorhabditis elegans Hypothetical
protein ZK792.1b protein.
Length = 475
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/62 (27%), Positives = 24/62 (38%)
Frame = +2
Query: 332 LVVLLFRDPHLLEGREGGEDRSTDPYGVLPLWRSNDLNLHCRWGESCDFLLHTVGDSRGT 511
LVV+ +L E ++D P+W+ D+ E C FL H V G
Sbjct: 22 LVVIFITIYTILHNESDNEIETSDVQLEKPIWKKEDIR------EMCQFLEHEVTGEEGD 75
Query: 512 WW 517
W
Sbjct: 76 QW 77
>Z68302-9|CAA92636.2| 969|Caenorhabditis elegans Hypothetical
protein ZK792.1a protein.
Length = 969
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/62 (27%), Positives = 24/62 (38%)
Frame = +2
Query: 332 LVVLLFRDPHLLEGREGGEDRSTDPYGVLPLWRSNDLNLHCRWGESCDFLLHTVGDSRGT 511
LVV+ +L E ++D P+W+ D+ E C FL H V G
Sbjct: 22 LVVIFITIYTILHNESDNEIETSDVQLEKPIWKKEDIR------EMCQFLEHEVTGEEGD 75
Query: 512 WW 517
W
Sbjct: 76 QW 77
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 240 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 332
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 343 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 242
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 240 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 332
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -2
Query: 424 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 263
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,542,263
Number of Sequences: 27780
Number of extensions: 346178
Number of successful extensions: 1058
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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