Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_K04
(848 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 188 1e-48
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 187 2e-48
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 83 4e-17
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 52 1e-07
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 33 0.039
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 0.48
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.5
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 28 1.5
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 28 1.5
SPBC15C4.04c |||amino acid permease, unknown 10|Schizosaccharomy... 27 3.4
SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces... 27 3.4
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 27 4.4
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 5.9
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.9
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 26 7.8
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 188 bits (457), Expect = 1e-48
Identities = 87/149 (58%), Positives = 101/149 (67%)
Frame = -3
Query: 831 ICPXNFXIEXPTXPHXEFXHRTXXXLDHXXLEXDXXXNVXXTXFQXXLVPXPRIXFPLVT 652
IC N IE PT + L NV FQ LVP PRI FPLVT
Sbjct: 216 ICRRNLDIERPTYENLNRLIAQVVSSITASLRFAGSLNVDLNEFQTNLVPYPRIHFPLVT 275
Query: 651 YAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAA 472
Y+P+ SA KA+HE SV EITN CFEP NQMVKCDPR G+YMA C+LYRGDV+P+DV AA
Sbjct: 276 YSPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRTGRYMATCLLYRGDVIPRDVQAA 335
Query: 471 IATIKTKRTIQFVDWCPTGFKVGINYQPP 385
+ +IK++RTIQFVDWCPTGFK+GI Y+PP
Sbjct: 336 VTSIKSRRTIQFVDWCPTGFKIGICYEPP 364
Score = 153 bits (371), Expect = 3e-38
Identities = 71/92 (77%), Positives = 77/92 (83%), Gaps = 1/92 (1%)
Frame = -1
Query: 419 PVSRSVSTTSHPPV-VPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHW 243
P + PP VPG +AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHW
Sbjct: 352 PTGFKIGICYEPPQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHW 411
Query: 242 YVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 147
YVGEGMEEGEFSEAREDLAALE+DYEEVG DS
Sbjct: 412 YVGEGMEEGEFSEAREDLAALERDYEEVGQDS 443
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 187 bits (456), Expect = 2e-48
Identities = 89/153 (58%), Positives = 101/153 (66%)
Frame = -3
Query: 843 SXLXICPXNFXIEXPTXPHXEFXHRTXXXLDHXXLEXDXXXNVXXTXFQXXLVPXPRIXF 664
S IC N IE P+ + L + NV FQ LVP PRI F
Sbjct: 208 SCYDICRRNLDIERPSYENLNRLIAQVVSSITASLRFEGSLNVDLAEFQTNLVPYPRIHF 267
Query: 663 PLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKD 484
PLVTYAP+ SA KA+HE SV EITN CFEP NQMVKCDPR G+YMA C+LYRGDV+P+D
Sbjct: 268 PLVTYAPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRAGRYMATCLLYRGDVIPRD 327
Query: 483 VNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 385
V AA+ TIK KRTIQFVDWCPTGFK+GI +PP
Sbjct: 328 VQAAVTTIKAKRTIQFVDWCPTGFKIGICDRPP 360
Score = 151 bits (367), Expect = 9e-38
Identities = 69/92 (75%), Positives = 77/92 (83%), Gaps = 1/92 (1%)
Frame = -1
Query: 419 PVSRSVSTTSHPPV-VPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHW 243
P + PP + G ++AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHW
Sbjct: 348 PTGFKIGICDRPPQHIEGSEIAKVDRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHW 407
Query: 242 YVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 147
YVGEGMEEGEFSEAREDLAALE+DYEEVG DS
Sbjct: 408 YVGEGMEEGEFSEAREDLAALERDYEEVGQDS 439
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 83.4 bits (197), Expect = 4e-17
Identities = 37/102 (36%), Positives = 59/102 (57%)
Frame = -3
Query: 690 LVPXPRIXFPLVTYAPVXSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 511
+VP PR+ F +V +AP+ + + + +SV E+T F+ N MV DPRHG+Y+ L
Sbjct: 257 MVPFPRLHFFMVGFAPLAAIGSSSFQAVSVPELTQQMFDANNMMVAADPRHGRYLTVAAL 316
Query: 510 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 385
+RG V K+V+ I +++TK + FV+W P + PP
Sbjct: 317 FRGKVSMKEVDEQIRSVQTKNSAYFVEWIPDNVLKAVCSVPP 358
Score = 64.9 bits (151), Expect = 1e-11
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Frame = -1
Query: 377 VPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR 198
VP DL + + + N+T+I E + RL +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 356 VPPKDL---KMSATFIGNSTSIQEIFRRLGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAE 412
Query: 197 ---EDLAALEKDYEEVGMD 150
DL + + Y+E G+D
Sbjct: 413 SNMNDLVSEYQQYQEAGID 431
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 51.6 bits (118), Expect = 1e-07
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Frame = -3
Query: 690 LVPXPRIXFPLVTYAPVXSA---EKAYHEQLSVAEITNACFEPANQMVKCDP-RHGKYMA 523
L+P PR F L +Y P + E + +V ++ P NQMV +P + +++
Sbjct: 260 LIPSPRCHFLLTSYTPFTNQQVEEAKAIRKTTVLDVMRRLLLPKNQMVSVNPSKKSCFIS 319
Query: 522 CCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 385
+ +G+ P DV+ ++ I+ +R F+ W P +V ++ + P
Sbjct: 320 ILDIIQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALSKKSP 365
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 33.5 bits (73), Expect = 0.039
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -1
Query: 506 VVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPVVP 372
VV P + RP++P P LS V PV+ V + PPV P
Sbjct: 552 VVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -1
Query: 506 VVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPVVP 372
VV P + RP++P P S PV V + PP VP
Sbjct: 642 VVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPPAVP 686
Score = 26.6 bits (56), Expect = 4.4
Identities = 23/88 (26%), Positives = 31/88 (35%)
Frame = -1
Query: 635 LPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLPSK 456
+P+RP + P S P P + +A S P+ P P
Sbjct: 559 VPQRPAVPVVPEALSVPQPPVAPVA--PEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEV 616
Query: 455 PSVLSNSSTGVQPVSRSVSTTSHPPVVP 372
PSV + V P + SV PVVP
Sbjct: 617 PSVPQRPAVPVVPEAPSVPQPPAAPVVP 644
Score = 25.8 bits (54), Expect = 7.8
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -1
Query: 497 SYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPVVP 372
S P+ P +P PSV + V P + SV PVVP
Sbjct: 633 SVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVP 674
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.9 bits (64), Expect = 0.48
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = -1
Query: 650 TRQSXLPRRPTM--NSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTSYPRM*T 477
T S P PT+ S +P + T+ ++ + +TPV ++ CT TS P T
Sbjct: 402 TGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPY--T 459
Query: 476 RPSLPSKPSVLSNSSTGVQPVSRSVSTTSHP 384
+ S P +N +T S TS P
Sbjct: 460 STPVTSTPLTTTNCTTSTSIPYTSTPVTSTP 490
Score = 27.1 bits (57), Expect = 3.4
Identities = 26/96 (27%), Positives = 44/96 (45%)
Frame = -1
Query: 680 TPVSXSHWSRTRQSXLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVV 501
TPV+ ++ + + P ++ + + T ++S P +TPV +S + T V
Sbjct: 525 TPVTTTNCTTSTSVLYTSTPVTSTPLATTNCTTSTSVPY---TSTPVTSSNYTISSSTPV 581
Query: 500 TSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTT 393
TS P T + + SVL S+ P S S S+T
Sbjct: 582 TSTPV--TTTNCTTSTSVLYTSTPITSPNSTSSSST 615
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -3
Query: 594 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 469
+ ACFEP N C H K C L + KD N ++
Sbjct: 361 LCGACFEPINAKCYCG-LHSKTYPCSSLPSPSISKKDENGSV 401
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 466 SDGRVHILGYDVTTVQHTASHVLAMTGVAFHHLVGGLEACVCDLGDGK 609
S G +LGY ++ A++V+A + V HL+ G D + K
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESK 454
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 28.3 bits (60), Expect = 1.5
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -2
Query: 301 GLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS--RRITKKSAWTPLKARVR 128
G+ TS TS T S S++ S+P P W P+ S+ TP+ V
Sbjct: 148 GVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSALGTSSKTPVYVVVD 207
Query: 127 EPKSTK 110
EP+ TK
Sbjct: 208 EPRFTK 213
>SPBC15C4.04c |||amino acid permease, unknown 10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 27.1 bits (57), Expect = 3.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 355 LAKSPPGTTGGWLVVDTDLETGWTPV 432
LAK P TG ++ D +GW P+
Sbjct: 234 LAKCPKFNTGKYVFTDVQASSGWHPI 259
>SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 476
Score = 27.1 bits (57), Expect = 3.4
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = -1
Query: 491 PRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPV---VPG 369
PR LP K VL T + VSR TTS P+ VPG
Sbjct: 293 PRPLLNSKLPRKTLVLDLDETLIHSVSRGSRTTSGQPIEVHVPG 336
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 26.6 bits (56), Expect = 4.4
Identities = 21/64 (32%), Positives = 29/64 (45%)
Frame = -1
Query: 551 ATPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPVVP 372
+TP ++S A VV+S T + S S ++SS P S SVS +P
Sbjct: 245 STPAVSSA-AASSSAVVSSVVSSATSVAASSTISSATSSSASASPTSSSVSGKRGLAWIP 303
Query: 371 GGDL 360
G DL
Sbjct: 304 GTDL 307
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.2 bits (55), Expect = 5.9
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = -1
Query: 707 PXSKXXWCLTPVSXSHWSRTRQSXLPRRPTMNSFPSPRSQTHASSPPTR 561
P +K P S + T +S +P P N+ PSP S + AS+ P R
Sbjct: 1232 PTAKAPPVPAPSSEAPSVSTPRSSVPS-PHSNASPSPTSSSMASAAPAR 1279
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 5.9
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -1
Query: 470 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 384
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 25.8 bits (54), Expect = 7.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 489 WVRRHHGTAYSKPCTCHDGG 548
W R H Y+KPC DGG
Sbjct: 16 WRRDHPFGFYAKPCKSSDGG 35
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,896,045
Number of Sequences: 5004
Number of extensions: 59809
Number of successful extensions: 241
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 420459900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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