Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_J23
(877 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 35 0.098
01_06_1731 + 39516897-39517632,39517744-39517912,39517985-395184... 35 0.098
02_05_1206 + 34941293-34941562,34942052-34942153,34942249-349425... 34 0.17
06_03_1455 + 30264023-30264174,30265930-30266070,30266328-302664... 33 0.30
05_01_0455 - 3614011-3614503,3615007-3615072,3615154-3615347,361... 32 0.69
03_03_0130 - 14699658-14699723,14699828-14700109,14700444-147005... 32 0.69
12_02_1253 + 27349868-27349998,27350223-27350251,27350616-273506... 31 0.92
01_07_0248 + 42261373-42261609,42261733-42261905,42261986-422620... 31 1.2
06_01_0894 + 6853797-6853971,6855078-6855295,6856353-6856385,685... 30 2.1
03_05_1065 + 30061588-30061883,30061995-30062056,30062196-300622... 30 2.8
08_02_0907 - 22485714-22486859,22487836-22487882,22488456-224888... 29 4.9
04_03_0975 - 21370715-21370877,21371227-21371319,21371383-213714... 29 4.9
11_03_0181 - 11301759-11301838,11302294-11303095 29 6.5
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 29 6.5
01_06_1189 + 35241254-35241928 29 6.5
07_01_0911 - 7664498-7664704,7664790-7664858,7666441-7666569 28 8.5
04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276 28 8.5
04_03_1022 - 21778315-21779007 28 8.5
02_03_0362 + 18158975-18159337 28 8.5
01_01_1130 + 8959909-8960396,8960588-8960638,8960736-8960827,896... 28 8.5
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 34.7 bits (76), Expect = 0.098
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -3
Query: 257 LGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKYXL 141
L G V F N DAE+ + + DG ++DG ++V++ L
Sbjct: 175 LPRGYGYVEFKNRADAEKALLYLDGGQIDGNVVKVRFAL 213
>01_06_1731 +
39516897-39517632,39517744-39517912,39517985-39518488,
39518619-39518747,39519849-39519990,39520082-39520453
Length = 683
Score = 34.7 bits (76), Expect = 0.098
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = -3
Query: 374 DNTKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFV--DVLGMGRAIVSFFNVRDAERC 201
D+ S+VV + LP ++ + L + G+VK V L V FF+ RDA+R
Sbjct: 216 DDGASRGSLVVLNSLP-AMSVFELREIFQAYGDVKDVRESALRPSNKFVEFFDTRDADRA 274
Query: 200 VKFFDGSKVDGQTIEVKY 147
+ +G ++ G+ + V+Y
Sbjct: 275 LHELNGKELFGRRLVVEY 292
>02_05_1206 +
34941293-34941562,34942052-34942153,34942249-34942521,
34942863-34942913
Length = 231
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Frame = -3
Query: 356 TSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVL-------GMGRAIVSFFNVRDAERCV 198
T+ + F LP + D L+ +++ + V+VL G A V+ + D E+ +
Sbjct: 59 TTKLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVI 118
Query: 197 KFFDGSKVDGQTIEVKY 147
K DGS G+T+ V +
Sbjct: 119 KNLDGSLYSGRTMRVNF 135
>06_03_1455 +
30264023-30264174,30265930-30266070,30266328-30266430,
30266510-30266659,30267184-30267229,30267383-30267738
Length = 315
Score = 33.1 bits (72), Expect = 0.30
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -3
Query: 248 GRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVK 150
G A V+ V DAERC+K+ + S ++G+ I V+
Sbjct: 149 GFAFVTMDTVEDAERCIKYLNQSVMEGRNITVE 181
>05_01_0455 -
3614011-3614503,3615007-3615072,3615154-3615347,
3615562-3615657,3615790-3615829,3616729-3616856
Length = 338
Score = 31.9 bits (69), Expect = 0.69
Identities = 22/67 (32%), Positives = 28/67 (41%)
Frame = -3
Query: 305 LSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKYXLKIRYA 126
L N G V+FVD L V F + RDA DG K DG I V++ +
Sbjct: 34 LENLFSRYGRVRFVD-LKNEYGFVEFSDPRDANDARLDLDGRKYDGSDIIVQFARGVERG 92
Query: 125 VADRR*Y 105
+ R Y
Sbjct: 93 LGGSRGY 99
>03_03_0130 -
14699658-14699723,14699828-14700109,14700444-14700545,
14701038-14701385
Length = 265
Score = 31.9 bits (69), Expect = 0.69
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Frame = -3
Query: 332 LPPSVDLQALSNKMREVGEVKFVDVL-------GMGRAIVSFFNVRDAERCVKFFDGSKV 174
LP SVD L+ + G V+ V+V+ G V+ +V + E V+ F+G +
Sbjct: 93 LPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAVEQFNGYIL 152
Query: 173 DGQTIEV 153
DG+++ V
Sbjct: 153 DGRSLRV 159
>12_02_1253 +
27349868-27349998,27350223-27350251,27350616-27350658,
27351005-27351137,27351238-27351444,27351578-27351619
Length = 194
Score = 31.5 bits (68), Expect = 0.92
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 472 PRHSMVTAAGRRSTISETAGPPPPRSPYTHLNLTT--PSN 359
PR + AA RST S TAG P P P+ H+ T PSN
Sbjct: 2 PRRAAAAAAAGRSTAS-TAGRPMPSPPHYHVGQGTKLPSN 40
>01_07_0248 + 42261373-42261609,42261733-42261905,42261986-42262058,
42262148-42262282,42262352-42262562,42262886-42263034,
42263169-42263267,42263821-42263989,42264176-42264308,
42264600-42264694,42264774-42264882,42265136-42265295,
42265433-42265594,42265814-42265985,42266254-42266402,
42266914-42266951,42267779-42267839,42267913-42268155,
42268233-42268315,42269521-42269609,42270449-42270495,
42270576-42270656,42270737-42270899,42271077-42271267,
42271691-42271762
Length = 1097
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -3
Query: 257 LGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKYXLKIR 132
L G + F DAE+ + + DG ++DG +++++ L R
Sbjct: 932 LPRGYGYIEFKKRTDAEKALLYMDGGQIDGNVVKLRFTLAPR 973
>06_01_0894 +
6853797-6853971,6855078-6855295,6856353-6856385,
6856776-6856856,6856857-6857069,6857184-6857381,
6857456-6857593,6858528-6858644,6858970-6859104
Length = 435
Score = 30.3 bits (65), Expect = 2.1
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = -1
Query: 418 AGPPPPRSPYTHLNLTTPSNRPAWWS--LVIC-LRAWTSRPSATRCGRSAR*SSWMCWAW 248
A PPPP P+T L T S RP + + + C L A +RP R SS +C
Sbjct: 5 AAPPPP-PPFTAGRLPTTSRRPCFSAGRIFRCSLPAAAARPRNAAFLAPLRTSSAVCTKA 63
Query: 247 VGRSSAS-STCATPSVV 200
V S + T ++P VV
Sbjct: 64 VSNSDGTPGTSSSPHVV 80
>03_05_1065 + 30061588-30061883,30061995-30062056,30062196-30062276,
30062391-30062464,30062547-30062629,30063044-30063147,
30063526-30063665,30063736-30063783,30063939-30063991,
30064178-30064262,30064346-30064412,30064496-30064606,
30065262-30065283,30066244-30071110,30071186-30071374,
30071463-30071577,30072329-30073388,30074247-30074694,
30074966-30075019,30075105-30076898,30076989-30077949,
30078271-30078384,30078459-30078613,30078934-30079026,
30079341-30079613,30093423-30093975,30094465-30094540,
30094619-30094718
Length = 4025
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 355 VDCLVLSDSNACTDCAEGAALLSRLSSTACLLQLPSSAEVSSNC 486
VDC + S + C+ +EG ++S + T CLL+ + A S C
Sbjct: 1870 VDCSI-SPTAGCSYNSEGNPIVSLIEQTICLLETAAGAPGSEAC 1912
>08_02_0907 -
22485714-22486859,22487836-22487882,22488456-22488830,
22489339-22489500,22490325-22490439
Length = 614
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 415 GPPPPRSPYTHLNLTTPSNRPAWWSL 338
GPPPP S + H+NL P++ P S+
Sbjct: 395 GPPPP-SMHNHINLLPPTSSPVTCSM 419
>04_03_0975 -
21370715-21370877,21371227-21371319,21371383-21371466,
21371745-21371869,21372360-21372600,21373640-21373734
Length = 266
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -1
Query: 436 STISETAGPPPPRSPYTHLNLTTPSNRPAWWSLVICLRAWTS 311
+T + PPPPRS Y + L P R A + + + W S
Sbjct: 3 ATATACPAPPPPRSLYRGVALAAPGRRRA-GDIPVLIEFWAS 43
>11_03_0181 - 11301759-11301838,11302294-11303095
Length = 293
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 469 RHSMVTAAGRRSTISETAGPPPPRSPYTHLNLTTP 365
RH + T AG E P P SP+ H++ TP
Sbjct: 134 RHCLDTVAGLAGWFREDFPAPSPPSPFEHVHGVTP 168
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 7/69 (10%)
Frame = -3
Query: 335 YLPPSVDLQALSNKMREVGEVKFVDVL-------GMGRAIVSFFNVRDAERCVKFFDGSK 177
YLPP++D L + GE+ V+ G V + +V A + +G
Sbjct: 313 YLPPTLDDSGLIGLFSQFGEIVMAKVIRDRITGQSKGYGFVKYSDVSQANAAIAAMNGYH 372
Query: 176 VDGQTIEVK 150
++G+ I V+
Sbjct: 373 LEGRVIAVR 381
>01_06_1189 + 35241254-35241928
Length = 224
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -1
Query: 424 ETAGPPPPRSPYTHLNLTTPSNRPAWWSLVI-CLRAWT 314
+T PPPP P T L+ T RP+ W L R+W+
Sbjct: 182 DTPAPPPPPRPNTELS-TRARARPSLWMLRFRGFRSWS 218
>07_01_0911 - 7664498-7664704,7664790-7664858,7666441-7666569
Length = 134
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Frame = -3
Query: 338 SYLPPSVDLQALSNKMREVGEVKFVDV------LGMGRAIVSFFNVRDAERCVKFFDGSK 177
S L P V + + E+GE+K V G A V F DA +K +DG
Sbjct: 31 SNLDPGVTVDDVQELFSEIGELKRYSVNYDKDGKSQGTAEVVFARKVDALEAIKRYDGVI 90
Query: 176 VDGQTIEV 153
+DG +++
Sbjct: 91 LDGNPMKI 98
>04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276
Length = 924
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/87 (22%), Positives = 44/87 (50%)
Frame = -3
Query: 410 APSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVS 231
+PSA S+ A ++ + + + + LP S+ + N G++ V ++ + ++V
Sbjct: 496 SPSA-SISAVQTTQDINKSRLYITN-LPRSMTADKMVNLFAPFGQITKV-LMNLEYSLVW 552
Query: 230 FFNVRDAERCVKFFDGSKVDGQTIEVK 150
+ + A + V+ DG V+G+ + VK
Sbjct: 553 YADAPSATKAVQHMDGYMVEGKRLVVK 579
>04_03_1022 - 21778315-21779007
Length = 230
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 412 PPPPRSPYTHLNLTTPSNRPAWW 344
PPPP PY +L PS P W
Sbjct: 40 PPPPPPPYVPPHLLPPSPAPQQW 62
>02_03_0362 + 18158975-18159337
Length = 120
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -1
Query: 319 WTSRPSATRCGRSAR*SSWMCWAWVGRSSASSTCA 215
W +RP CG S R +C W S TCA
Sbjct: 40 WDARPRCATCGGSGR-VDCLCNRWSDGDSGCRTCA 73
>01_01_1130 +
8959909-8960396,8960588-8960638,8960736-8960827,
8960964-8961054,8961877-8961937,8962172-8962216,
8962318-8962391,8962565-8962637,8963288-8963345,
8963398-8963468,8963801-8963837,8964040-8964128,
8964207-8964263,8964366-8964449,8964529-8964627,
8964765-8964869,8965145-8965216,8965308-8965497,
8965810-8966207
Length = 744
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -1
Query: 469 RHSMVTAAGRRSTISETAGPPPPRSPYTHLNLT-TPSNRPA 350
R S TA R + + PPPP P T+ LT PS+ P+
Sbjct: 64 RESSATAVDRTPPPTPPSPPPPPPPPPTNGTLTPPPSSAPS 104
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,920,796
Number of Sequences: 37544
Number of extensions: 427916
Number of successful extensions: 2000
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1995
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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