Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_J23
(877 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M72709-2|AAA35565.1| 248|Homo sapiens protein ( Human alternati... 46 1e-04
M69040-1|AAA03476.1| 248|Homo sapiens SF2p33 protein. 46 1e-04
BC010264-1|AAH10264.1| 248|Homo sapiens splicing factor, argini... 46 1e-04
AB062124-1|BAB93456.1| 248|Homo sapiens OK/SW-cl.3 protein. 46 1e-04
M72709-1|AAA35564.1| 292|Homo sapiens protein ( Human alternati... 45 3e-04
BC033785-1|AAH33785.1| 201|Homo sapiens SFRS1 protein protein. 45 3e-04
AB209558-1|BAD92795.1| 233|Homo sapiens splicing factor, argini... 45 3e-04
U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c pr... 44 7e-04
U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein. 44 7e-04
BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor, argini... 44 7e-04
BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor, argini... 44 7e-04
AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor, argini... 44 7e-04
U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein. 43 0.001
U12431-1|AAA69698.1| 359|Homo sapiens ELAV-like neuronal protei... 43 0.001
BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein. 43 0.001
AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,... 43 0.001
AL161628-3|CAI13377.1| 189|Homo sapiens ELAV (embryonic lethal,... 43 0.001
AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,... 43 0.001
AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,... 43 0.001
AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,... 43 0.001
M62843-1|AAA58396.1| 380|Homo sapiens brain protein protein. 37 0.11
BC036071-1|AAH36071.1| 366|Homo sapiens ELAVL4 protein protein. 37 0.11
AY033998-1|AAK57541.1| 380|Homo sapiens HUDPRO1 protein. 37 0.11
AY033997-1|AAK57540.1| 366|Homo sapiens HUD1 protein. 37 0.11
AY033996-1|AAK57539.1| 383|Homo sapiens HUD4 protein. 37 0.11
AY033995-1|AAK57538.1| 366|Homo sapiens HUD3 protein. 37 0.11
AL592182-6|CAI15792.1| 385|Homo sapiens ELAV (embryonic lethal,... 37 0.11
AL592182-5|CAI15793.1| 371|Homo sapiens ELAV (embryonic lethal,... 37 0.11
AL592182-4|CAI15791.1| 380|Homo sapiens ELAV (embryonic lethal,... 37 0.11
AL592182-3|CAI15790.1| 366|Homo sapiens ELAV (embryonic lethal,... 37 0.11
AL592182-2|CAI15789.1| 383|Homo sapiens ELAV (embryonic lethal,... 37 0.11
AL592182-1|CAI15788.1| 366|Homo sapiens ELAV (embryonic lethal,... 37 0.11
AL583843-6|CAI14638.1| 385|Homo sapiens ELAV (embryonic lethal,... 37 0.11
AL583843-5|CAI14639.1| 371|Homo sapiens ELAV (embryonic lethal,... 37 0.11
AL583843-4|CAI14637.1| 380|Homo sapiens ELAV (embryonic lethal,... 37 0.11
AL583843-3|CAI14636.1| 366|Homo sapiens ELAV (embryonic lethal,... 37 0.11
AL583843-2|CAI14635.1| 383|Homo sapiens ELAV (embryonic lethal,... 37 0.11
AL583843-1|CAI14634.1| 366|Homo sapiens ELAV (embryonic lethal,... 37 0.11
L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein. 35 0.34
BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,... 35 0.34
BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,... 35 0.34
BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,... 35 0.34
AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor... 35 0.34
AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2 ... 35 0.34
AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein. 35 0.34
L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor ... 33 1.0
BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 33 1.0
BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 33 1.0
AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 33 1.0
AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 33 1.0
AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor, argini... 33 1.0
AC004236-1|AAC04476.1| 192|Homo sapiens SRP0001LB protein. 33 1.0
AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor, argini... 33 1.0
U30826-1|AAA93070.1| 272|Homo sapiens SRp40-1 protein. 33 1.8
BT007089-1|AAP35752.1| 272|Homo sapiens splicing factor, argini... 33 1.8
BC040209-1|AAH40209.1| 272|Homo sapiens splicing factor, argini... 33 1.8
BC018823-1|AAH18823.1| 272|Homo sapiens splicing factor, argini... 33 1.8
BC113691-1|AAI13692.1| 395|Homo sapiens ataxin 2-binding protei... 32 2.4
AK001027-1|BAA91472.1| 397|Homo sapiens protein ( Homo sapiens ... 32 2.4
AF448859-1|AAP41925.1| 370|Homo sapiens ataxin 2-binding protei... 32 2.4
AF229057-1|AAL71904.1| 418|Homo sapiens hexaribonucleotide bind... 32 2.4
AF109120-3|AAL83407.1| 395|Homo sapiens hexaribonucleotide bind... 32 2.4
AF109120-2|AAL83408.1| 392|Homo sapiens hexaribonucleotide bind... 32 2.4
AF109120-1|AAL83409.1| 418|Homo sapiens hexaribonucleotide bind... 32 2.4
AF109106-1|AAL83406.1| 395|Homo sapiens hexaribonucleotide bind... 32 2.4
AF107203-1|AAF78291.1| 377|Homo sapiens ataxin 2-binding protei... 32 2.4
AF094849-1|AAL83405.1| 392|Homo sapiens hexaribonucleotide bind... 32 2.4
CR456559-1|CAG30445.1| 376|Homo sapiens RBM9 protein. 31 4.1
BC064914-1|AAH64914.2| 723|Homo sapiens KIAA0430 protein protein. 31 4.1
BC025281-1|AAH25281.1| 380|Homo sapiens RNA binding motif prote... 31 4.1
AY072786-1|AAL67150.1| 390|Homo sapiens RNA binding motif prote... 31 4.1
AM419009-1|CAL91352.1| 398|Homo sapiens RNA binding motif prote... 31 4.1
AK055213-1|BAB70875.1| 450|Homo sapiens mRNA. protein. 31 4.1
AF229058-1|AAL71905.1| 380|Homo sapiens hexaribonucleotide bind... 31 4.1
AB012134-1|BAB82433.1| 304|Homo sapiens Limkain b1 protein. 31 4.1
AB007890-1|BAA24860.3| 1506|Homo sapiens KIAA0430 protein protein. 31 4.1
M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein. 31 5.5
DQ778625-1|ABG77459.1| 451|Homo sapiens unknown protein. 31 5.5
AL079295-2|CAI19059.1| 367|Homo sapiens RNA binding motif prote... 31 5.5
AL049748-3|CAI20525.1| 367|Homo sapiens RNA binding motif prote... 31 5.5
AL009266-1|CAA15842.1| 367|Homo sapiens hypothetical protein pr... 31 5.5
AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens ... 31 5.5
AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein. 31 5.5
AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens ... 31 7.2
BC117321-1|AAI17322.1| 1486|Homo sapiens RAPGEF2 protein protein. 30 9.6
AC074344-1|AAY40909.1| 1479|Homo sapiens unknown protein. 30 9.6
AB002311-1|BAA20772.2| 1508|Homo sapiens KIAA0313 protein. 30 9.6
>M72709-2|AAA35565.1| 248|Homo sapiens protein ( Human alternative
splicing factor mRNA, complete cds. ).
Length = 248
Score = 46.4 bits (105), Expect = 1e-04
Identities = 26/74 (35%), Positives = 36/74 (48%)
Frame = -3
Query: 368 TKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFF 189
+++S + VV S LPPS Q L + MRE G+V + DV G +V F D V+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKL 175
Query: 188 DGSKVDGQTIEVKY 147
D +K E Y
Sbjct: 176 DNTKFRSHEGETAY 189
>M69040-1|AAA03476.1| 248|Homo sapiens SF2p33 protein.
Length = 248
Score = 46.4 bits (105), Expect = 1e-04
Identities = 26/74 (35%), Positives = 36/74 (48%)
Frame = -3
Query: 368 TKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFF 189
+++S + VV S LPPS Q L + MRE G+V + DV G +V F D V+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKL 175
Query: 188 DGSKVDGQTIEVKY 147
D +K E Y
Sbjct: 176 DNTKFRSHEGETAY 189
>BC010264-1|AAH10264.1| 248|Homo sapiens splicing factor,
arginine/serine-rich 1 (splicing factor 2, alternate
splicing protein.
Length = 248
Score = 46.4 bits (105), Expect = 1e-04
Identities = 26/74 (35%), Positives = 36/74 (48%)
Frame = -3
Query: 368 TKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFF 189
+++S + VV S LPPS Q L + MRE G+V + DV G +V F D V+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKL 175
Query: 188 DGSKVDGQTIEVKY 147
D +K E Y
Sbjct: 176 DNTKFRSHEGETAY 189
>AB062124-1|BAB93456.1| 248|Homo sapiens OK/SW-cl.3 protein.
Length = 248
Score = 46.4 bits (105), Expect = 1e-04
Identities = 26/74 (35%), Positives = 36/74 (48%)
Frame = -3
Query: 368 TKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFF 189
+++S + VV S LPPS Q L + MRE G+V + DV G +V F D V+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKL 175
Query: 188 DGSKVDGQTIEVKY 147
D +K E Y
Sbjct: 176 DNTKFRSHEGETAY 189
>M72709-1|AAA35564.1| 292|Homo sapiens protein ( Human alternative
splicing factor mRNA, complete cds. ).
Length = 292
Score = 45.2 bits (102), Expect = 3e-04
Identities = 24/64 (37%), Positives = 34/64 (53%)
Frame = -3
Query: 368 TKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFF 189
+++S + VV S LPPS Q L + MRE G+V + DV G +V F D V+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKL 175
Query: 188 DGSK 177
D +K
Sbjct: 176 DNTK 179
>BC033785-1|AAH33785.1| 201|Homo sapiens SFRS1 protein protein.
Length = 201
Score = 45.2 bits (102), Expect = 3e-04
Identities = 24/64 (37%), Positives = 34/64 (53%)
Frame = -3
Query: 368 TKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFF 189
+++S + VV S LPPS Q L + MRE G+V + DV G +V F D V+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKL 175
Query: 188 DGSK 177
D +K
Sbjct: 176 DNTK 179
>AB209558-1|BAD92795.1| 233|Homo sapiens splicing factor,
arginine/serine-rich 1 (splicing factor 2, alternate
splicing protein.
Length = 233
Score = 45.2 bits (102), Expect = 3e-04
Identities = 24/64 (37%), Positives = 34/64 (53%)
Frame = -3
Query: 368 TKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFF 189
+++S + VV S LPPS Q L + MRE G+V + DV G +V F D V+
Sbjct: 148 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKL 207
Query: 188 DGSK 177
D +K
Sbjct: 208 DNTK 211
>U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c
protein.
Length = 221
Score = 44.0 bits (99), Expect = 7e-04
Identities = 25/74 (33%), Positives = 36/74 (48%)
Frame = -3
Query: 368 TKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFF 189
T++S V+ S LPPS Q L + MRE G+V + DV G +V + D E ++
Sbjct: 106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKL 165
Query: 188 DGSKVDGQTIEVKY 147
D +K E Y
Sbjct: 166 DDTKFRSHEGETSY 179
>U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein.
Length = 221
Score = 44.0 bits (99), Expect = 7e-04
Identities = 25/74 (33%), Positives = 36/74 (48%)
Frame = -3
Query: 368 TKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFF 189
T++S V+ S LPPS Q L + MRE G+V + DV G +V + D E ++
Sbjct: 106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKL 165
Query: 188 DGSKVDGQTIEVKY 147
D +K E Y
Sbjct: 166 DDTKFRSHEGETSY 179
>BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 44.0 bits (99), Expect = 7e-04
Identities = 25/74 (33%), Positives = 36/74 (48%)
Frame = -3
Query: 368 TKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFF 189
T++S V+ S LPPS Q L + MRE G+V + DV G +V + D E ++
Sbjct: 106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKL 165
Query: 188 DGSKVDGQTIEVKY 147
D +K E Y
Sbjct: 166 DDTKFRSHEGETSY 179
>BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 44.0 bits (99), Expect = 7e-04
Identities = 25/74 (33%), Positives = 36/74 (48%)
Frame = -3
Query: 368 TKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFF 189
T++S V+ S LPPS Q L + MRE G+V + DV G +V + D E ++
Sbjct: 106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKL 165
Query: 188 DGSKVDGQTIEVKY 147
D +K E Y
Sbjct: 166 DDTKFRSHEGETSY 179
>AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 44.0 bits (99), Expect = 7e-04
Identities = 25/74 (33%), Positives = 36/74 (48%)
Frame = -3
Query: 368 TKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFF 189
T++S V+ S LPPS Q L + MRE G+V + DV G +V + D E ++
Sbjct: 106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKL 165
Query: 188 DGSKVDGQTIEVKY 147
D +K E Y
Sbjct: 166 DDTKFRSHEGETSY 179
>U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein.
Length = 346
Score = 43.2 bits (97), Expect = 0.001
Identities = 22/99 (22%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Frame = -3
Query: 380 ESDNTKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVL-------GMGRAIVSFFN 222
+S NT+ S + ++ +YLP ++ + L + +GE++ ++ +G V++ +
Sbjct: 30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89
Query: 221 VRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAVADRR*Y 105
+DAE+ + +G ++ +TI+V Y ++ D Y
Sbjct: 90 PKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLY 128
>U12431-1|AAA69698.1| 359|Homo sapiens ELAV-like neuronal protein 1
protein.
Length = 359
Score = 43.2 bits (97), Expect = 0.001
Identities = 22/99 (22%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Frame = -3
Query: 380 ESDNTKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVL-------GMGRAIVSFFN 222
+S NT+ S + ++ +YLP ++ + L + +GE++ ++ +G V++ +
Sbjct: 30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89
Query: 221 VRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAVADRR*Y 105
+DAE+ + +G ++ +TI+V Y ++ D Y
Sbjct: 90 PKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLY 128
>BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein.
Length = 346
Score = 43.2 bits (97), Expect = 0.001
Identities = 22/99 (22%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Frame = -3
Query: 380 ESDNTKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVL-------GMGRAIVSFFN 222
+S NT+ S + ++ +YLP ++ + L + +GE++ ++ +G V++ +
Sbjct: 30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89
Query: 221 VRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAVADRR*Y 105
+DAE+ + +G ++ +TI+V Y ++ D Y
Sbjct: 90 PKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLY 128
>AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 387
Score = 43.2 bits (97), Expect = 0.001
Identities = 22/99 (22%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Frame = -3
Query: 380 ESDNTKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVL-------GMGRAIVSFFN 222
+S NT+ S + ++ +YLP ++ + L + +GE++ ++ +G V++ +
Sbjct: 58 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 117
Query: 221 VRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAVADRR*Y 105
+DAE+ + +G ++ +TI+V Y ++ D Y
Sbjct: 118 PKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLY 156
>AL161628-3|CAI13377.1| 189|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 189
Score = 43.2 bits (97), Expect = 0.001
Identities = 22/99 (22%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Frame = -3
Query: 380 ESDNTKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVL-------GMGRAIVSFFN 222
+S NT+ S + ++ +YLP ++ + L + +GE++ ++ +G V++ +
Sbjct: 30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89
Query: 221 VRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAVADRR*Y 105
+DAE+ + +G ++ +TI+V Y ++ D Y
Sbjct: 90 PKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLY 128
>AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 359
Score = 43.2 bits (97), Expect = 0.001
Identities = 22/99 (22%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Frame = -3
Query: 380 ESDNTKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVL-------GMGRAIVSFFN 222
+S NT+ S + ++ +YLP ++ + L + +GE++ ++ +G V++ +
Sbjct: 30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89
Query: 221 VRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAVADRR*Y 105
+DAE+ + +G ++ +TI+V Y ++ D Y
Sbjct: 90 PKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLY 128
>AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 346
Score = 43.2 bits (97), Expect = 0.001
Identities = 22/99 (22%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Frame = -3
Query: 380 ESDNTKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVL-------GMGRAIVSFFN 222
+S NT+ S + ++ +YLP ++ + L + +GE++ ++ +G V++ +
Sbjct: 30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89
Query: 221 VRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAVADRR*Y 105
+DAE+ + +G ++ +TI+V Y ++ D Y
Sbjct: 90 PKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLY 128
>AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B) vari
protein.
Length = 367
Score = 43.2 bits (97), Expect = 0.001
Identities = 22/99 (22%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Frame = -3
Query: 380 ESDNTKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVL-------GMGRAIVSFFN 222
+S NT+ S + ++ +YLP ++ + L + +GE++ ++ +G V++ +
Sbjct: 38 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 97
Query: 221 VRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAVADRR*Y 105
+DAE+ + +G ++ +TI+V Y ++ D Y
Sbjct: 98 PKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLY 136
>M62843-1|AAA58396.1| 380|Homo sapiens brain protein protein.
Length = 380
Score = 36.7 bits (81), Expect = 0.11
Identities = 25/126 (19%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Frame = -3
Query: 461 DGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREV 282
+G S + ++R PS A T S + ++ +YLP ++ + + +
Sbjct: 14 NGPTSNTSNGPSSNNRNCPSPMQTGA----TTDDSKTNLIVNYLPQNMTQEEFRSLFGSI 69
Query: 281 GEVKFVDVL-------GMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAV 123
GE++ ++ +G V++ + +DAE+ + +G ++ +TI+V Y ++
Sbjct: 70 GEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASI 129
Query: 122 ADRR*Y 105
D Y
Sbjct: 130 RDANLY 135
>BC036071-1|AAH36071.1| 366|Homo sapiens ELAVL4 protein protein.
Length = 366
Score = 36.7 bits (81), Expect = 0.11
Identities = 25/126 (19%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Frame = -3
Query: 461 DGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREV 282
+G S + ++R PS A T S + ++ +YLP ++ + + +
Sbjct: 14 NGPTSNTSNGPSSNNRNCPSPMQTGA----TTDDSKTNLIVNYLPQNMTQEEFRSLFGSI 69
Query: 281 GEVKFVDVL-------GMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAV 123
GE++ ++ +G V++ + +DAE+ + +G ++ +TI+V Y ++
Sbjct: 70 GEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASI 129
Query: 122 ADRR*Y 105
D Y
Sbjct: 130 RDANLY 135
>AY033998-1|AAK57541.1| 380|Homo sapiens HUDPRO1 protein.
Length = 380
Score = 36.7 bits (81), Expect = 0.11
Identities = 25/126 (19%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Frame = -3
Query: 461 DGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREV 282
+G S + ++R PS A T S + ++ +YLP ++ + + +
Sbjct: 14 NGPTSNTSNGPSSNNRNCPSPMQTGA----TTDDSKTNLIVNYLPQNMTQEEFRSLFGSI 69
Query: 281 GEVKFVDVL-------GMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAV 123
GE++ ++ +G V++ + +DAE+ + +G ++ +TI+V Y ++
Sbjct: 70 GEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASI 129
Query: 122 ADRR*Y 105
D Y
Sbjct: 130 RDANLY 135
>AY033997-1|AAK57540.1| 366|Homo sapiens HUD1 protein.
Length = 366
Score = 36.7 bits (81), Expect = 0.11
Identities = 25/126 (19%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Frame = -3
Query: 461 DGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREV 282
+G S + ++R PS A T S + ++ +YLP ++ + + +
Sbjct: 14 NGPTSNTSNGPSSNNRNCPSPMQTGA----TTDDSKTNLIVNYLPQNMTQEEFRSLFGSI 69
Query: 281 GEVKFVDVL-------GMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAV 123
GE++ ++ +G V++ + +DAE+ + +G ++ +TI+V Y ++
Sbjct: 70 GEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASI 129
Query: 122 ADRR*Y 105
D Y
Sbjct: 130 RDANLY 135
>AY033996-1|AAK57539.1| 383|Homo sapiens HUD4 protein.
Length = 383
Score = 36.7 bits (81), Expect = 0.11
Identities = 25/126 (19%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Frame = -3
Query: 461 DGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREV 282
+G S + ++R PS A T S + ++ +YLP ++ + + +
Sbjct: 31 NGPTSNTSNGPSSNNRNCPSPMQTGA----TTDDSKTNLIVNYLPQNMTQEEFRSLFGSI 86
Query: 281 GEVKFVDVL-------GMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAV 123
GE++ ++ +G V++ + +DAE+ + +G ++ +TI+V Y ++
Sbjct: 87 GEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASI 146
Query: 122 ADRR*Y 105
D Y
Sbjct: 147 RDANLY 152
>AY033995-1|AAK57538.1| 366|Homo sapiens HUD3 protein.
Length = 366
Score = 36.7 bits (81), Expect = 0.11
Identities = 25/126 (19%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Frame = -3
Query: 461 DGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREV 282
+G S + ++R PS A T S + ++ +YLP ++ + + +
Sbjct: 14 NGPTSNTSNGPSSNNRNCPSPMQTGA----TTDDSKTNLIVNYLPQNMTQEEFRSLFGSI 69
Query: 281 GEVKFVDVL-------GMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAV 123
GE++ ++ +G V++ + +DAE+ + +G ++ +TI+V Y ++
Sbjct: 70 GEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASI 129
Query: 122 ADRR*Y 105
D Y
Sbjct: 130 RDANLY 135
>AL592182-6|CAI15792.1| 385|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 385
Score = 36.7 bits (81), Expect = 0.11
Identities = 25/126 (19%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Frame = -3
Query: 461 DGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREV 282
+G S + ++R PS A T S + ++ +YLP ++ + + +
Sbjct: 19 NGPTSNTSNGPSSNNRNCPSPMQTGA----TTDDSKTNLIVNYLPQNMTQEEFRSLFGSI 74
Query: 281 GEVKFVDVL-------GMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAV 123
GE++ ++ +G V++ + +DAE+ + +G ++ +TI+V Y ++
Sbjct: 75 GEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASI 134
Query: 122 ADRR*Y 105
D Y
Sbjct: 135 RDANLY 140
>AL592182-5|CAI15793.1| 371|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 371
Score = 36.7 bits (81), Expect = 0.11
Identities = 25/126 (19%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Frame = -3
Query: 461 DGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREV 282
+G S + ++R PS A T S + ++ +YLP ++ + + +
Sbjct: 19 NGPTSNTSNGPSSNNRNCPSPMQTGA----TTDDSKTNLIVNYLPQNMTQEEFRSLFGSI 74
Query: 281 GEVKFVDVL-------GMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAV 123
GE++ ++ +G V++ + +DAE+ + +G ++ +TI+V Y ++
Sbjct: 75 GEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASI 134
Query: 122 ADRR*Y 105
D Y
Sbjct: 135 RDANLY 140
>AL592182-4|CAI15791.1| 380|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 380
Score = 36.7 bits (81), Expect = 0.11
Identities = 25/126 (19%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Frame = -3
Query: 461 DGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREV 282
+G S + ++R PS A T S + ++ +YLP ++ + + +
Sbjct: 14 NGPTSNTSNGPSSNNRNCPSPMQTGA----TTDDSKTNLIVNYLPQNMTQEEFRSLFGSI 69
Query: 281 GEVKFVDVL-------GMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAV 123
GE++ ++ +G V++ + +DAE+ + +G ++ +TI+V Y ++
Sbjct: 70 GEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASI 129
Query: 122 ADRR*Y 105
D Y
Sbjct: 130 RDANLY 135
>AL592182-3|CAI15790.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 36.7 bits (81), Expect = 0.11
Identities = 25/126 (19%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Frame = -3
Query: 461 DGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREV 282
+G S + ++R PS A T S + ++ +YLP ++ + + +
Sbjct: 14 NGPTSNTSNGPSSNNRNCPSPMQTGA----TTDDSKTNLIVNYLPQNMTQEEFRSLFGSI 69
Query: 281 GEVKFVDVL-------GMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAV 123
GE++ ++ +G V++ + +DAE+ + +G ++ +TI+V Y ++
Sbjct: 70 GEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASI 129
Query: 122 ADRR*Y 105
D Y
Sbjct: 130 RDANLY 135
>AL592182-2|CAI15789.1| 383|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 383
Score = 36.7 bits (81), Expect = 0.11
Identities = 25/126 (19%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Frame = -3
Query: 461 DGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREV 282
+G S + ++R PS A T S + ++ +YLP ++ + + +
Sbjct: 31 NGPTSNTSNGPSSNNRNCPSPMQTGA----TTDDSKTNLIVNYLPQNMTQEEFRSLFGSI 86
Query: 281 GEVKFVDVL-------GMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAV 123
GE++ ++ +G V++ + +DAE+ + +G ++ +TI+V Y ++
Sbjct: 87 GEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASI 146
Query: 122 ADRR*Y 105
D Y
Sbjct: 147 RDANLY 152
>AL592182-1|CAI15788.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 36.7 bits (81), Expect = 0.11
Identities = 25/126 (19%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Frame = -3
Query: 461 DGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREV 282
+G S + ++R PS A T S + ++ +YLP ++ + + +
Sbjct: 14 NGPTSNTSNGPSSNNRNCPSPMQTGA----TTDDSKTNLIVNYLPQNMTQEEFRSLFGSI 69
Query: 281 GEVKFVDVL-------GMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAV 123
GE++ ++ +G V++ + +DAE+ + +G ++ +TI+V Y ++
Sbjct: 70 GEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASI 129
Query: 122 ADRR*Y 105
D Y
Sbjct: 130 RDANLY 135
>AL583843-6|CAI14638.1| 385|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 385
Score = 36.7 bits (81), Expect = 0.11
Identities = 25/126 (19%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Frame = -3
Query: 461 DGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREV 282
+G S + ++R PS A T S + ++ +YLP ++ + + +
Sbjct: 19 NGPTSNTSNGPSSNNRNCPSPMQTGA----TTDDSKTNLIVNYLPQNMTQEEFRSLFGSI 74
Query: 281 GEVKFVDVL-------GMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAV 123
GE++ ++ +G V++ + +DAE+ + +G ++ +TI+V Y ++
Sbjct: 75 GEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASI 134
Query: 122 ADRR*Y 105
D Y
Sbjct: 135 RDANLY 140
>AL583843-5|CAI14639.1| 371|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 371
Score = 36.7 bits (81), Expect = 0.11
Identities = 25/126 (19%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Frame = -3
Query: 461 DGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREV 282
+G S + ++R PS A T S + ++ +YLP ++ + + +
Sbjct: 19 NGPTSNTSNGPSSNNRNCPSPMQTGA----TTDDSKTNLIVNYLPQNMTQEEFRSLFGSI 74
Query: 281 GEVKFVDVL-------GMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAV 123
GE++ ++ +G V++ + +DAE+ + +G ++ +TI+V Y ++
Sbjct: 75 GEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASI 134
Query: 122 ADRR*Y 105
D Y
Sbjct: 135 RDANLY 140
>AL583843-4|CAI14637.1| 380|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 380
Score = 36.7 bits (81), Expect = 0.11
Identities = 25/126 (19%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Frame = -3
Query: 461 DGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREV 282
+G S + ++R PS A T S + ++ +YLP ++ + + +
Sbjct: 14 NGPTSNTSNGPSSNNRNCPSPMQTGA----TTDDSKTNLIVNYLPQNMTQEEFRSLFGSI 69
Query: 281 GEVKFVDVL-------GMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAV 123
GE++ ++ +G V++ + +DAE+ + +G ++ +TI+V Y ++
Sbjct: 70 GEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASI 129
Query: 122 ADRR*Y 105
D Y
Sbjct: 130 RDANLY 135
>AL583843-3|CAI14636.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 36.7 bits (81), Expect = 0.11
Identities = 25/126 (19%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Frame = -3
Query: 461 DGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREV 282
+G S + ++R PS A T S + ++ +YLP ++ + + +
Sbjct: 14 NGPTSNTSNGPSSNNRNCPSPMQTGA----TTDDSKTNLIVNYLPQNMTQEEFRSLFGSI 69
Query: 281 GEVKFVDVL-------GMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAV 123
GE++ ++ +G V++ + +DAE+ + +G ++ +TI+V Y ++
Sbjct: 70 GEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASI 129
Query: 122 ADRR*Y 105
D Y
Sbjct: 130 RDANLY 135
>AL583843-2|CAI14635.1| 383|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 383
Score = 36.7 bits (81), Expect = 0.11
Identities = 25/126 (19%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Frame = -3
Query: 461 DGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREV 282
+G S + ++R PS A T S + ++ +YLP ++ + + +
Sbjct: 31 NGPTSNTSNGPSSNNRNCPSPMQTGA----TTDDSKTNLIVNYLPQNMTQEEFRSLFGSI 86
Query: 281 GEVKFVDVL-------GMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAV 123
GE++ ++ +G V++ + +DAE+ + +G ++ +TI+V Y ++
Sbjct: 87 GEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASI 146
Query: 122 ADRR*Y 105
D Y
Sbjct: 147 RDANLY 152
>AL583843-1|CAI14634.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 36.7 bits (81), Expect = 0.11
Identities = 25/126 (19%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Frame = -3
Query: 461 DGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREV 282
+G S + ++R PS A T S + ++ +YLP ++ + + +
Sbjct: 14 NGPTSNTSNGPSSNNRNCPSPMQTGA----TTDDSKTNLIVNYLPQNMTQEEFRSLFGSI 69
Query: 281 GEVKFVDVL-------GMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAV 123
GE++ ++ +G V++ + +DAE+ + +G ++ +TI+V Y ++
Sbjct: 70 GEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASI 129
Query: 122 ADRR*Y 105
D Y
Sbjct: 130 RDANLY 135
>L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.34
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Frame = -3
Query: 449 SRQAVDDKRDSRAA--PSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREVGE 276
SR+ D++R SR+ P + + + + V L +V + G+
Sbjct: 127 SRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGK 186
Query: 275 VKFVDV--------LGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTI 159
+K +D+ L G A V F N +AE+ +K DG ++DGQ I
Sbjct: 187 IKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEI 233
>BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.34
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Frame = -3
Query: 449 SRQAVDDKRDSRAA--PSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREVGE 276
SR+ D++R SR+ P + + + + V L +V + G+
Sbjct: 127 SRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGK 186
Query: 275 VKFVDV--------LGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTI 159
+K +D+ L G A V F N +AE+ +K DG ++DGQ I
Sbjct: 187 IKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEI 233
>BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.34
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Frame = -3
Query: 449 SRQAVDDKRDSRAA--PSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREVGE 276
SR+ D++R SR+ P + + + + V L +V + G+
Sbjct: 127 SRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGK 186
Query: 275 VKFVDV--------LGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTI 159
+K +D+ L G A V F N +AE+ +K DG ++DGQ I
Sbjct: 187 IKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEI 233
>BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.34
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Frame = -3
Query: 449 SRQAVDDKRDSRAA--PSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREVGE 276
SR+ D++R SR+ P + + + + V L +V + G+
Sbjct: 127 SRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGK 186
Query: 275 VKFVDV--------LGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTI 159
+K +D+ L G A V F N +AE+ +K DG ++DGQ I
Sbjct: 187 IKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEI 233
>AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor
RNPS1 protein.
Length = 282
Score = 35.1 bits (77), Expect = 0.34
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Frame = -3
Query: 449 SRQAVDDKRDSRAA--PSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREVGE 276
SR+ D++R SR+ P + + + + V L +V + G+
Sbjct: 104 SRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGK 163
Query: 275 VKFVDV--------LGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTI 159
+K +D+ L G A V F N +AE+ +K DG ++DGQ I
Sbjct: 164 IKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEI 210
>AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2
protein.
Length = 228
Score = 35.1 bits (77), Expect = 0.34
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Frame = -3
Query: 449 SRQAVDDKRDSRAA--PSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREVGE 276
SR+ D++R SR+ P + + + + V L +V + G+
Sbjct: 50 SRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGK 109
Query: 275 VKFVDV--------LGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTI 159
+K +D+ L G A V F N +AE+ +K DG ++DGQ I
Sbjct: 110 IKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEI 156
>AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.34
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Frame = -3
Query: 449 SRQAVDDKRDSRAA--PSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREVGE 276
SR+ D++R SR+ P + + + + V L +V + G+
Sbjct: 127 SRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGK 186
Query: 275 VKFVDV--------LGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTI 159
+K +D+ L G A V F N +AE+ +K DG ++DGQ I
Sbjct: 187 IKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEI 233
>L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor
protein.
Length = 494
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = -3
Query: 311 QALSNKMREVGEVKFVDVLGMGR---AIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
Q L + MR+ GEV + D GR ++ F + D +R ++ DG++V+G+ I +
Sbjct: 118 QDLKDYMRQAGEVTYADA-HKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
>BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = -3
Query: 311 QALSNKMREVGEVKFVDVLGMGR---AIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
Q L + MR+ GEV + D GR ++ F + D +R ++ DG++V+G+ I +
Sbjct: 118 QDLKDYMRQAGEVTYADA-HKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
>BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = -3
Query: 311 QALSNKMREVGEVKFVDVLGMGR---AIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
Q L + MR+ GEV + D GR ++ F + D +R ++ DG++V+G+ I +
Sbjct: 118 QDLKDYMRQAGEVTYADA-HKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
>AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = -3
Query: 311 QALSNKMREVGEVKFVDVLGMGR---AIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
Q L + MR+ GEV + D GR ++ F + D +R ++ DG++V+G+ I +
Sbjct: 118 QDLKDYMRQAGEVTYADA-HKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
>AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = -3
Query: 311 QALSNKMREVGEVKFVDVLGMGR---AIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
Q L + MR+ GEV + D GR ++ F + D +R ++ DG++V+G+ I +
Sbjct: 118 QDLKDYMRQAGEVTYADA-HKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
>AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 382
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = -3
Query: 311 QALSNKMREVGEVKFVDVLGMGR---AIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
Q L + MR+ GEV + D GR ++ F + D +R ++ DG++V+G+ I +
Sbjct: 118 QDLKDYMRQAGEVTYADA-HKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
>AC004236-1|AAC04476.1| 192|Homo sapiens SRP0001LB protein.
Length = 192
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = -3
Query: 311 QALSNKMREVGEVKFVDVLGMGR---AIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
Q L + MR+ GEV + D GR ++ F + D +R ++ DG++V+G+ I +
Sbjct: 118 QDLKDYMRQAGEVTYADA-HKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 172
>AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 419
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = -3
Query: 311 QALSNKMREVGEVKFVDVLGMGR---AIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
Q L + MR+ GEV + D GR ++ F + D +R ++ DG++V+G+ I +
Sbjct: 43 QDLKDYMRQAGEVTYADA-HKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL 97
>U30826-1|AAA93070.1| 272|Homo sapiens SRp40-1 protein.
Length = 272
Score = 32.7 bits (71), Expect = 1.8
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = -3
Query: 362 QSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDV--LGMGRAIVSFFNVRDAERCVKFF 189
++ + ++ L V Q L + MR+ GEV F D + +V F + D + ++
Sbjct: 105 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKL 164
Query: 188 DGSKVDGQTIEV 153
G +++G+ I++
Sbjct: 165 SGKEINGRKIKL 176
>BT007089-1|AAP35752.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 32.7 bits (71), Expect = 1.8
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = -3
Query: 362 QSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDV--LGMGRAIVSFFNVRDAERCVKFF 189
++ + ++ L V Q L + MR+ GEV F D + +V F + D + ++
Sbjct: 105 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKL 164
Query: 188 DGSKVDGQTIEV 153
G +++G+ I++
Sbjct: 165 SGKEINGRKIKL 176
>BC040209-1|AAH40209.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 32.7 bits (71), Expect = 1.8
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = -3
Query: 362 QSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDV--LGMGRAIVSFFNVRDAERCVKFF 189
++ + ++ L V Q L + MR+ GEV F D + +V F + D + ++
Sbjct: 105 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKL 164
Query: 188 DGSKVDGQTIEV 153
G +++G+ I++
Sbjct: 165 SGKEINGRKIKL 176
>BC018823-1|AAH18823.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 32.7 bits (71), Expect = 1.8
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = -3
Query: 362 QSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDV--LGMGRAIVSFFNVRDAERCVKFF 189
++ + ++ L V Q L + MR+ GEV F D + +V F + D + ++
Sbjct: 105 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKL 164
Query: 188 DGSKVDGQTIEV 153
G +++G+ I++
Sbjct: 165 SGKEINGRKIKL 176
>BC113691-1|AAI13692.1| 395|Homo sapiens ataxin 2-binding protein 1
protein.
Length = 395
Score = 32.3 bits (70), Expect = 2.4
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = -3
Query: 476 DTSALDGNCSRQAVDDKRDSRAAPSAQSVHAFE--SDNTKQSTSMVVFSYLPPSVDLQAL 303
DTSA + + DD + P Q E S + S + F + P DL+ +
Sbjct: 99 DTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDP--DLRQM 156
Query: 302 SNKMREVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
+ ++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 157 FGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 208
>AK001027-1|BAA91472.1| 397|Homo sapiens protein ( Homo sapiens
cDNA FLJ10165 fis, clone HEMBA1003591, weakly similar to
CHLOROPLAST 28 KD RIBONUCLEOPROTEIN PRECURSOR. ).
Length = 397
Score = 32.3 bits (70), Expect = 2.4
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = -3
Query: 476 DTSALDGNCSRQAVDDKRDSRAAPSAQSVHAFE--SDNTKQSTSMVVFSYLPPSVDLQAL 303
DTSA + + DD + P Q E S + S + F + P DL+ +
Sbjct: 79 DTSAQTVSGTATQADDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDP--DLRQM 136
Query: 302 SNKMREVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
+ ++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 137 FGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 188
>AF448859-1|AAP41925.1| 370|Homo sapiens ataxin 2-binding protein
variant 1 protein.
Length = 370
Score = 32.3 bits (70), Expect = 2.4
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = -3
Query: 476 DTSALDGNCSRQAVDDKRDSRAAPSAQSVHAFE--SDNTKQSTSMVVFSYLPPSVDLQAL 303
DTSA + + DD + P Q E S + S + F + P DL+ +
Sbjct: 79 DTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDP--DLRQM 136
Query: 302 SNKMREVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
+ ++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 137 FGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 188
>AF229057-1|AAL71904.1| 418|Homo sapiens hexaribonucleotide binding
protein 1 isoform gamma protein.
Length = 418
Score = 32.3 bits (70), Expect = 2.4
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = -3
Query: 476 DTSALDGNCSRQAVDDKRDSRAAPSAQSVHAFE--SDNTKQSTSMVVFSYLPPSVDLQAL 303
DTSA + + DD + P Q E S + S + F + P DL+ +
Sbjct: 99 DTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDP--DLRQM 156
Query: 302 SNKMREVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
+ ++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 157 FGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 208
>AF109120-3|AAL83407.1| 395|Homo sapiens hexaribonucleotide binding
protein 1 isoform beta protein.
Length = 395
Score = 32.3 bits (70), Expect = 2.4
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = -3
Query: 476 DTSALDGNCSRQAVDDKRDSRAAPSAQSVHAFE--SDNTKQSTSMVVFSYLPPSVDLQAL 303
DTSA + + DD + P Q E S + S + F + P DL+ +
Sbjct: 99 DTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDP--DLRQM 156
Query: 302 SNKMREVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
+ ++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 157 FGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 208
>AF109120-2|AAL83408.1| 392|Homo sapiens hexaribonucleotide binding
protein 1 isoform alpha protein.
Length = 392
Score = 32.3 bits (70), Expect = 2.4
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = -3
Query: 476 DTSALDGNCSRQAVDDKRDSRAAPSAQSVHAFE--SDNTKQSTSMVVFSYLPPSVDLQAL 303
DTSA + + DD + P Q E S + S + F + P DL+ +
Sbjct: 99 DTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDP--DLRQM 156
Query: 302 SNKMREVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
+ ++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 157 FGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 208
>AF109120-1|AAL83409.1| 418|Homo sapiens hexaribonucleotide binding
protein 1 isoform gamma protein.
Length = 418
Score = 32.3 bits (70), Expect = 2.4
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = -3
Query: 476 DTSALDGNCSRQAVDDKRDSRAAPSAQSVHAFE--SDNTKQSTSMVVFSYLPPSVDLQAL 303
DTSA + + DD + P Q E S + S + F + P DL+ +
Sbjct: 99 DTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDP--DLRQM 156
Query: 302 SNKMREVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
+ ++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 157 FGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 208
>AF109106-1|AAL83406.1| 395|Homo sapiens hexaribonucleotide binding
protein 1 isoform beta protein.
Length = 395
Score = 32.3 bits (70), Expect = 2.4
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = -3
Query: 476 DTSALDGNCSRQAVDDKRDSRAAPSAQSVHAFE--SDNTKQSTSMVVFSYLPPSVDLQAL 303
DTSA + + DD + P Q E S + S + F + P DL+ +
Sbjct: 99 DTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDP--DLRQM 156
Query: 302 SNKMREVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
+ ++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 157 FGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 208
>AF107203-1|AAF78291.1| 377|Homo sapiens ataxin 2-binding protein
protein.
Length = 377
Score = 32.3 bits (70), Expect = 2.4
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = -3
Query: 476 DTSALDGNCSRQAVDDKRDSRAAPSAQSVHAFE--SDNTKQSTSMVVFSYLPPSVDLQAL 303
DTSA + + DD + P Q E S + S + F + P DL+ +
Sbjct: 59 DTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDP--DLRQM 116
Query: 302 SNKMREVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
+ ++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 117 FGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 168
>AF094849-1|AAL83405.1| 392|Homo sapiens hexaribonucleotide binding
protein 1 isoform alpha protein.
Length = 392
Score = 32.3 bits (70), Expect = 2.4
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = -3
Query: 476 DTSALDGNCSRQAVDDKRDSRAAPSAQSVHAFE--SDNTKQSTSMVVFSYLPPSVDLQAL 303
DTSA + + DD + P Q E S + S + F + P DL+ +
Sbjct: 99 DTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDP--DLRQM 156
Query: 302 SNKMREVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
+ ++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 157 FGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 208
>CR456559-1|CAG30445.1| 376|Homo sapiens RBM9 protein.
Length = 376
Score = 31.5 bits (68), Expect = 4.1
Identities = 34/167 (20%), Positives = 66/167 (39%), Gaps = 2/167 (1%)
Frame = -3
Query: 647 VQPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDTS 468
VQPFT F PQ T+ ++ + T A
Sbjct: 22 VQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGEQSSNSPSTQNG 81
Query: 467 ALDGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMR 288
+L Q + ++++ +++S +S + S + F + P DL+ + +
Sbjct: 82 SLTTEGGAQTDGQQSQTQSSENSES----KSTPKRLHVSNIPFRFRDP--DLRQMFGQFG 135
Query: 287 EVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 136 KILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 182
>BC064914-1|AAH64914.2| 723|Homo sapiens KIAA0430 protein protein.
Length = 723
Score = 31.5 bits (68), Expect = 4.1
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = -3
Query: 356 TSMVVFSYLPPSVDLQALSNKMREVGEV---KFVDVLGMGRAIVSFFNVRDAERCVKFFD 186
T + V++ LP + D +++SN++R + + K + + G AI+ F N AER K +
Sbjct: 511 TLLYVYN-LPANKDGKSVSNRLRRLSDNCGGKVLSITGCS-AILRFINQDSAERAQKRME 568
Query: 185 GSKVDGQTIEVKYXLKIR 132
V G I V + K R
Sbjct: 569 NEDVFGNRIIVSFTPKNR 586
>BC025281-1|AAH25281.1| 380|Homo sapiens RNA binding motif protein
9 protein.
Length = 380
Score = 31.5 bits (68), Expect = 4.1
Identities = 34/167 (20%), Positives = 66/167 (39%), Gaps = 2/167 (1%)
Frame = -3
Query: 647 VQPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDTS 468
VQPFT F PQ T+ ++ + T A
Sbjct: 22 VQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGEQSSNSPSTQNG 81
Query: 467 ALDGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMR 288
+L Q + ++++ +++S +S + S + F + P DL+ + +
Sbjct: 82 SLTTEGGAQTDGQQSQTQSSENSES----KSTPKRLHVSNIPFRFRDP--DLRQMFGQFG 135
Query: 287 EVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 136 KILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 182
>AY072786-1|AAL67150.1| 390|Homo sapiens RNA binding motif protein
9 protein.
Length = 390
Score = 31.5 bits (68), Expect = 4.1
Identities = 34/167 (20%), Positives = 66/167 (39%), Gaps = 2/167 (1%)
Frame = -3
Query: 647 VQPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDTS 468
VQPFT F PQ T+ ++ + T A
Sbjct: 32 VQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGEQSSNSPSTQNG 91
Query: 467 ALDGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMR 288
+L Q + ++++ +++S +S + S + F + P DL+ + +
Sbjct: 92 SLTTEGGAQTDGQQSQTQSSENSES----KSTPKRLHVSNIPFRFRDP--DLRQMFGQFG 145
Query: 287 EVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 146 KILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 192
>AM419009-1|CAL91352.1| 398|Homo sapiens RNA binding motif protein
9 protein.
Length = 398
Score = 31.5 bits (68), Expect = 4.1
Identities = 34/167 (20%), Positives = 66/167 (39%), Gaps = 2/167 (1%)
Frame = -3
Query: 647 VQPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDTS 468
VQPFT F PQ T+ ++ + T A
Sbjct: 30 VQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGEQSSNSPSTQNG 89
Query: 467 ALDGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMR 288
+L Q + ++++ +++S +S + S + F + P DL+ + +
Sbjct: 90 SLTTEGGAQTDGQQSQTQSSENSES----KSTPKRLHVSNIPFRFRDP--DLRQMFGQFG 143
Query: 287 EVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 144 KILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 190
>AK055213-1|BAB70875.1| 450|Homo sapiens mRNA. protein.
Length = 450
Score = 31.5 bits (68), Expect = 4.1
Identities = 34/167 (20%), Positives = 66/167 (39%), Gaps = 2/167 (1%)
Frame = -3
Query: 647 VQPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDTS 468
VQPFT F PQ T+ ++ + T A
Sbjct: 92 VQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGEQSSNSPSTQNG 151
Query: 467 ALDGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMR 288
+L Q + ++++ +++S +S + S + F + P DL+ + +
Sbjct: 152 SLTTEGGAQTDGQQSQTQSSENSES----KSTPKRLHVSNIPFRFRDP--DLRQMFGQFG 205
Query: 287 EVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 206 KILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 252
>AF229058-1|AAL71905.1| 380|Homo sapiens hexaribonucleotide binding
protein 2 protein.
Length = 380
Score = 31.5 bits (68), Expect = 4.1
Identities = 34/167 (20%), Positives = 66/167 (39%), Gaps = 2/167 (1%)
Frame = -3
Query: 647 VQPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDTS 468
VQPFT F PQ T+ ++ + T A
Sbjct: 22 VQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGEQSSNSPSTQNG 81
Query: 467 ALDGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMR 288
+L Q + ++++ +++S +S + S + F + P DL+ + +
Sbjct: 82 SLTTEGGAQTDGQQSQTQSSENSES----KSTPKRLHVSNIPFRFRDP--DLRQMFGQFG 135
Query: 287 EVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 136 KILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 182
>AB012134-1|BAB82433.1| 304|Homo sapiens Limkain b1 protein.
Length = 304
Score = 31.5 bits (68), Expect = 4.1
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = -3
Query: 356 TSMVVFSYLPPSVDLQALSNKMREVGEV---KFVDVLGMGRAIVSFFNVRDAERCVKFFD 186
T + V++ LP + D +++SN++R + + K + + G AI+ F N AER K +
Sbjct: 201 TLLYVYN-LPANKDGKSVSNRLRRLSDNCGGKVLSITGCS-AILRFINQDSAERAQKRME 258
Query: 185 GSKVDGQTIEVKYXLKIR 132
V G I V + K R
Sbjct: 259 NEDVFGNRIIVSFTPKNR 276
>AB007890-1|BAA24860.3| 1506|Homo sapiens KIAA0430 protein protein.
Length = 1506
Score = 31.5 bits (68), Expect = 4.1
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = -3
Query: 356 TSMVVFSYLPPSVDLQALSNKMREVGEV---KFVDVLGMGRAIVSFFNVRDAERCVKFFD 186
T + V++ LP + D +++SN++R + + K + + G AI+ F N AER K +
Sbjct: 276 TLLYVYN-LPANKDGKSVSNRLRRLSDNCGGKVLSITGCS-AILRFINQDSAERAQKRME 333
Query: 185 GSKVDGQTIEVKYXLKIR 132
V G I V + K R
Sbjct: 334 NEDVFGNRIIVSFTPKNR 351
>M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein.
Length = 707
Score = 31.1 bits (67), Expect = 5.5
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = -3
Query: 332 LPPSVDLQALSNKMREVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTI 159
LP V L + E++ V D G A + F DAE+ + G+++DG++I
Sbjct: 400 LPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSI 459
Query: 158 EVKY 147
+ Y
Sbjct: 460 SLYY 463
>DQ778625-1|ABG77459.1| 451|Homo sapiens unknown protein.
Length = 451
Score = 31.1 bits (67), Expect = 5.5
Identities = 35/168 (20%), Positives = 68/168 (40%), Gaps = 3/168 (1%)
Frame = -3
Query: 647 VQPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDTS 468
VQPFT F PQ T+ ++ + T A + S
Sbjct: 92 VQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGE----QSSNSPS 147
Query: 467 ALDGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQ-STSMVVFSYLPPSVDLQALSNKM 291
+G+ ++ + D + + + S ++ K+ S + F + P DL+ + +
Sbjct: 148 TQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDP--DLRQMFGQF 205
Query: 290 REVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 206 GKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 253
>AL079295-2|CAI19059.1| 367|Homo sapiens RNA binding motif protein
9 protein.
Length = 367
Score = 31.1 bits (67), Expect = 5.5
Identities = 35/168 (20%), Positives = 68/168 (40%), Gaps = 3/168 (1%)
Frame = -3
Query: 647 VQPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDTS 468
VQPFT F PQ T+ ++ + T A + S
Sbjct: 22 VQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGE----QSSNSPS 77
Query: 467 ALDGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQ-STSMVVFSYLPPSVDLQALSNKM 291
+G+ ++ + D + + + S ++ K+ S + F + P DL+ + +
Sbjct: 78 TQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDP--DLRQMFGQF 135
Query: 290 REVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 136 GKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 183
>AL049748-3|CAI20525.1| 367|Homo sapiens RNA binding motif protein
9 protein.
Length = 367
Score = 31.1 bits (67), Expect = 5.5
Identities = 35/168 (20%), Positives = 68/168 (40%), Gaps = 3/168 (1%)
Frame = -3
Query: 647 VQPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDTS 468
VQPFT F PQ T+ ++ + T A + S
Sbjct: 22 VQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGE----QSSNSPS 77
Query: 467 ALDGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQ-STSMVVFSYLPPSVDLQALSNKM 291
+G+ ++ + D + + + S ++ K+ S + F + P DL+ + +
Sbjct: 78 TQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDP--DLRQMFGQF 135
Query: 290 REVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 136 GKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 183
>AL009266-1|CAA15842.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 31.1 bits (67), Expect = 5.5
Identities = 35/168 (20%), Positives = 68/168 (40%), Gaps = 3/168 (1%)
Frame = -3
Query: 647 VQPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDTS 468
VQPFT F PQ T+ ++ + T A + S
Sbjct: 22 VQPFTTIPFPPPPQNGIPTEYGVPHTQDYAGQTGEHNLTLYGSTQAHGE----QSSNSPS 77
Query: 467 ALDGNCSRQAVDDKRDSRAAPSAQSVHAFESDNTKQ-STSMVVFSYLPPSVDLQALSNKM 291
+G+ ++ + D + + + S ++ K+ S + F + P DL+ + +
Sbjct: 78 TQNGSLTQTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDP--DLRQMFGQF 135
Query: 290 REVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
++ +V+ + + G V+F N DA+R + G+ V+G+ IEV
Sbjct: 136 GKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 183
>AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens
cDNA FLJ34423 fis, clone HHDPC2008123, highly similar to
NUCLEOLIN. ).
Length = 687
Score = 31.1 bits (67), Expect = 5.5
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = -3
Query: 332 LPPSVDLQALSNKMREVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTI 159
LP V L + E++ V D G A + F DAE+ + G+++DG++I
Sbjct: 377 LPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSI 436
Query: 158 EVKY 147
+ Y
Sbjct: 437 SLYY 440
>AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein.
Length = 710
Score = 31.1 bits (67), Expect = 5.5
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = -3
Query: 332 LPPSVDLQALSNKMREVGEVKFV--DVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTI 159
LP V L + E++ V D G A + F DAE+ + G+++DG++I
Sbjct: 400 LPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSI 459
Query: 158 EVKY 147
+ Y
Sbjct: 460 SLYY 463
>AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens
cDNA FLJ45706 fis, clone FEBRA2028457, highly similar
to Nucleolin. ).
Length = 603
Score = 30.7 bits (66), Expect = 7.2
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = -3
Query: 332 LPPSVDLQALSNKMREVGEVKFVDVLG--MGRAIVSFFNVRDAERCVKFFDGSKVDGQTI 159
LP V L + E++ V G G A + F DAE+ + G+++DG++I
Sbjct: 293 LPYKVTQDELKEVFEDAAEIRLVSKDGNSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSI 352
Query: 158 EVKY 147
+ Y
Sbjct: 353 SLYY 356
>BC117321-1|AAI17322.1| 1486|Homo sapiens RAPGEF2 protein protein.
Length = 1486
Score = 30.3 bits (65), Expect = 9.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 427 SETAGPPPPRSPYTHLNLTTPSNRPAW 347
S+TAGP + P+ H + P N+P W
Sbjct: 1430 SDTAGPSSVQQPHGHPTSSRPVNKPQW 1456
>AC074344-1|AAY40909.1| 1479|Homo sapiens unknown protein.
Length = 1479
Score = 30.3 bits (65), Expect = 9.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 427 SETAGPPPPRSPYTHLNLTTPSNRPAW 347
S+TAGP + P+ H + P N+P W
Sbjct: 1422 SDTAGPSSVQQPHGHPTSSRPVNKPQW 1448
>AB002311-1|BAA20772.2| 1508|Homo sapiens KIAA0313 protein.
Length = 1508
Score = 30.3 bits (65), Expect = 9.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 427 SETAGPPPPRSPYTHLNLTTPSNRPAW 347
S+TAGP + P+ H + P N+P W
Sbjct: 1451 SDTAGPSSVQQPHGHPTSSRPVNKPQW 1477
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,937,499
Number of Sequences: 237096
Number of extensions: 2214958
Number of successful extensions: 11058
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 10473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11012
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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