Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_J23
(877 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118772-1|AAM50632.1| 430|Drosophila melanogaster GH11495p pro... 62 1e-09
AE014297-952|AAF54387.1| 632|Drosophila melanogaster CG9373-PA ... 62 1e-09
AY051919-1|AAK93343.1| 255|Drosophila melanogaster LD40489p pro... 43 5e-04
AF234157-1|AAF60294.1| 255|Drosophila melanogaster SR family sp... 43 5e-04
AF232773-1|AAF43413.1| 255|Drosophila melanogaster SR family sp... 43 5e-04
AE014297-2188|AAF55300.1| 255|Drosophila melanogaster CG6987-PA... 43 5e-04
BT010058-1|AAQ22527.1| 865|Drosophila melanogaster LD15974p pro... 34 0.30
AY118678-1|AAM50538.1| 582|Drosophila melanogaster AT08247p pro... 34 0.30
AE014296-1825|AAF50154.2| 849|Drosophila melanogaster CG32062-P... 34 0.30
AE014296-1824|AAF50153.2| 881|Drosophila melanogaster CG32062-P... 34 0.30
M21152-1|AAA28506.1| 483|Drosophila melanogaster elav protein. 33 0.52
AY118927-1|AAM50787.1| 374|Drosophila melanogaster LD23870p pro... 33 0.52
AY051822-1|AAK93246.1| 483|Drosophila melanogaster LD33076p pro... 33 0.52
AL022139-2|CAB37430.1| 483|Drosophila melanogaster EG:65F1.2,FB... 33 0.52
AL022139-1|CAA18091.1| 479|Drosophila melanogaster EG:65F1.2,FB... 33 0.52
AJ459409-1|CAD30680.1| 374|Drosophila melanogaster RNA-binding ... 33 0.52
AE014298-54|AAX52472.1| 479|Drosophila melanogaster CG4262-PB, ... 33 0.52
AE014298-53|AAF45517.2| 483|Drosophila melanogaster CG4262-PA, ... 33 0.52
AE014297-964|AAF54396.2| 374|Drosophila melanogaster CG16788-PA... 33 0.52
X62599-1|CAA44483.1| 376|Drosophila melanogaster 52-kD bracketi... 31 1.6
X58720-1|CAA41556.1| 350|Drosophila melanogaster SRp55 protein. 31 1.6
BT003286-1|AAO25044.1| 350|Drosophila melanogaster GM10155p pro... 31 1.6
BT001495-1|AAN71250.1| 350|Drosophila melanogaster LD30815p pro... 31 1.6
AY113327-1|AAM29332.1| 350|Drosophila melanogaster AT29232p pro... 31 1.6
AE014297-1720|AAF54968.1| 329|Drosophila melanogaster CG10851-P... 31 1.6
AE014297-1718|AAN13575.1| 350|Drosophila melanogaster CG10851-P... 31 1.6
AE014297-1717|AAF54969.2| 350|Drosophila melanogaster CG10851-P... 31 1.6
AE014296-1312|AAF50519.1| 249|Drosophila melanogaster CG13685-P... 31 1.6
AY069584-1|AAL39729.1| 195|Drosophila melanogaster LD32469p pro... 31 2.1
AF232775-1|AAF43415.1| 195|Drosophila melanogaster SR family sp... 31 2.1
AE014134-2203|AAF53192.1| 195|Drosophila melanogaster CG5442-PB... 31 2.1
AF281363-1|AAK12372.1| 1854|Drosophila melanogaster virilizer pr... 29 8.4
AE014135-25|AAN06556.2| 1314|Drosophila melanogaster CG32000-PB,... 29 8.4
AE014135-24|AAN06554.2| 1314|Drosophila melanogaster CG32000-PA,... 29 8.4
AE014135-22|AAS64610.1| 1388|Drosophila melanogaster CG32000-PG,... 29 8.4
AE013599-3583|AAF46988.1| 1854|Drosophila melanogaster CG3496-PA... 29 8.4
>AY118772-1|AAM50632.1| 430|Drosophila melanogaster GH11495p
protein.
Length = 430
Score = 61.7 bits (143), Expect = 1e-09
Identities = 26/72 (36%), Positives = 43/72 (59%)
Frame = -3
Query: 362 QSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFFDG 183
+ + ++ +P + Q L +K RE+G+VKF ++ G +V FF RDAE + DG
Sbjct: 358 RKSDTIIIKNVPITCTWQTLRDKFREIGDVKFAEIRGNDVGVVRFFKERDAELAIALMDG 417
Query: 182 SKVDGQTIEVKY 147
S++DG+ I+V Y
Sbjct: 418 SRLDGRNIKVTY 429
>AE014297-952|AAF54387.1| 632|Drosophila melanogaster CG9373-PA
protein.
Length = 632
Score = 61.7 bits (143), Expect = 1e-09
Identities = 26/72 (36%), Positives = 43/72 (59%)
Frame = -3
Query: 362 QSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFFDG 183
+ + ++ +P + Q L +K RE+G+VKF ++ G +V FF RDAE + DG
Sbjct: 560 RKSDTIIIKNVPITCTWQTLRDKFREIGDVKFAEIRGNDVGVVRFFKERDAELAIALMDG 619
Query: 182 SKVDGQTIEVKY 147
S++DG+ I+V Y
Sbjct: 620 SRLDGRNIKVTY 631
>AY051919-1|AAK93343.1| 255|Drosophila melanogaster LD40489p
protein.
Length = 255
Score = 43.2 bits (97), Expect = 5e-04
Identities = 26/78 (33%), Positives = 38/78 (48%)
Frame = -3
Query: 365 KQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFFD 186
K+S V+ + LP S Q L + MRE G+V F D G +V F D + +K D
Sbjct: 111 KRSQYRVMVTGLPASGSWQDLKDHMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLD 170
Query: 185 GSKVDGQTIEVKYXLKIR 132
S+ EV Y +++R
Sbjct: 171 DSRFRSHEGEVAY-IRVR 187
Score = 38.7 bits (86), Expect = 0.010
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = -3
Query: 332 LPPSVDLQALSNKMREVGEVKFVDVL---GMGRAIVSFFNVRDAERCVKFFDGSKVDGQT 162
LPP + + + + + G+V FVD+ G A V F + RDA+ VK DG DG
Sbjct: 14 LPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDGYR 73
Query: 161 IEVKY 147
+ V++
Sbjct: 74 LRVEF 78
>AF234157-1|AAF60294.1| 255|Drosophila melanogaster SR family
splicing factor protein.
Length = 255
Score = 43.2 bits (97), Expect = 5e-04
Identities = 26/78 (33%), Positives = 38/78 (48%)
Frame = -3
Query: 365 KQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFFD 186
K+S V+ + LP S Q L + MRE G+V F D G +V F D + +K D
Sbjct: 111 KRSQYRVMVTGLPASGSWQDLKDHMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLD 170
Query: 185 GSKVDGQTIEVKYXLKIR 132
S+ EV Y +++R
Sbjct: 171 DSRFRSHEGEVAY-IRVR 187
Score = 38.7 bits (86), Expect = 0.010
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = -3
Query: 332 LPPSVDLQALSNKMREVGEVKFVDVL---GMGRAIVSFFNVRDAERCVKFFDGSKVDGQT 162
LPP + + + + + G+V FVD+ G A V F + RDA+ VK DG DG
Sbjct: 14 LPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDGYR 73
Query: 161 IEVKY 147
+ V++
Sbjct: 74 LRVEF 78
>AF232773-1|AAF43413.1| 255|Drosophila melanogaster SR family
splicing factor SF2 protein.
Length = 255
Score = 43.2 bits (97), Expect = 5e-04
Identities = 26/78 (33%), Positives = 38/78 (48%)
Frame = -3
Query: 365 KQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFFD 186
K+S V+ + LP S Q L + MRE G+V F D G +V F D + +K D
Sbjct: 111 KRSQYRVMVTGLPASGSWQDLKDHMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLD 170
Query: 185 GSKVDGQTIEVKYXLKIR 132
S+ EV Y +++R
Sbjct: 171 DSRFRSHEGEVAY-IRVR 187
Score = 38.7 bits (86), Expect = 0.010
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = -3
Query: 332 LPPSVDLQALSNKMREVGEVKFVDVL---GMGRAIVSFFNVRDAERCVKFFDGSKVDGQT 162
LPP + + + + + G+V FVD+ G A V F + RDA+ VK DG DG
Sbjct: 14 LPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDGYR 73
Query: 161 IEVKY 147
+ V++
Sbjct: 74 LRVEF 78
>AE014297-2188|AAF55300.1| 255|Drosophila melanogaster CG6987-PA
protein.
Length = 255
Score = 43.2 bits (97), Expect = 5e-04
Identities = 26/78 (33%), Positives = 38/78 (48%)
Frame = -3
Query: 365 KQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFFD 186
K+S V+ + LP S Q L + MRE G+V F D G +V F D + +K D
Sbjct: 111 KRSQYRVMVTGLPASGSWQDLKDHMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLD 170
Query: 185 GSKVDGQTIEVKYXLKIR 132
S+ EV Y +++R
Sbjct: 171 DSRFRSHEGEVAY-IRVR 187
Score = 38.7 bits (86), Expect = 0.010
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = -3
Query: 332 LPPSVDLQALSNKMREVGEVKFVDVL---GMGRAIVSFFNVRDAERCVKFFDGSKVDGQT 162
LPP + + + + + G+V FVD+ G A V F + RDA+ VK DG DG
Sbjct: 14 LPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDGYR 73
Query: 161 IEVKY 147
+ V++
Sbjct: 74 LRVEF 78
>BT010058-1|AAQ22527.1| 865|Drosophila melanogaster LD15974p
protein.
Length = 865
Score = 33.9 bits (74), Expect = 0.30
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = -3
Query: 419 SRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFV--DVLGMG 246
S AA +A S+ A +S + S + F + P DL+A+ + + +V+ + + G
Sbjct: 361 SVAAVAAASLDA-KSQPKRLHVSNIPFRFRDP--DLRAMFGQFGTILDVEIIFNERGSKG 417
Query: 245 RAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
V+F N DAER + G+ V+G+ IEV
Sbjct: 418 FGFVTFANSNDAERARERLHGTVVEGRKIEV 448
>AY118678-1|AAM50538.1| 582|Drosophila melanogaster AT08247p
protein.
Length = 582
Score = 33.9 bits (74), Expect = 0.30
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = -3
Query: 419 SRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFV--DVLGMG 246
S AA +A S+ A +S + S + F + P DL+A+ + + +V+ + + G
Sbjct: 181 SVAAVAAASLDA-KSQPKRLHVSNIPFRFRDP--DLRAMFGQFGTILDVEIIFNERGSKG 237
Query: 245 RAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
V+F N DAER + G+ V+G+ IEV
Sbjct: 238 FGFVTFANSNDAERARERLHGTVVEGRKIEV 268
>AE014296-1825|AAF50154.2| 849|Drosophila melanogaster CG32062-PB,
isoform B protein.
Length = 849
Score = 33.9 bits (74), Expect = 0.30
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = -3
Query: 419 SRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFV--DVLGMG 246
S AA +A S+ A +S + S + F + P DL+A+ + + +V+ + + G
Sbjct: 419 SVAAVAAASLDA-KSQPKRLHVSNIPFRFRDP--DLRAMFGQFGTILDVEIIFNERGSKG 475
Query: 245 RAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
V+F N DAER + G+ V+G+ IEV
Sbjct: 476 FGFVTFANSNDAERARERLHGTVVEGRKIEV 506
>AE014296-1824|AAF50153.2| 881|Drosophila melanogaster CG32062-PD,
isoform D protein.
Length = 881
Score = 33.9 bits (74), Expect = 0.30
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = -3
Query: 419 SRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFV--DVLGMG 246
S AA +A S+ A +S + S + F + P DL+A+ + + +V+ + + G
Sbjct: 419 SVAAVAAASLDA-KSQPKRLHVSNIPFRFRDP--DLRAMFGQFGTILDVEIIFNERGSKG 475
Query: 245 RAIVSFFNVRDAERCVKFFDGSKVDGQTIEV 153
V+F N DAER + G+ V+G+ IEV
Sbjct: 476 FGFVTFANSNDAERARERLHGTVVEGRKIEV 506
>M21152-1|AAA28506.1| 483|Drosophila melanogaster elav protein.
Length = 483
Score = 33.1 bits (72), Expect = 0.52
Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 25/191 (13%)
Frame = -3
Query: 644 QPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDTSA 465
Q Q + V Q +T A AA + QQ AQ V+Q +Q + +
Sbjct: 54 QQQVQQAILQVQQQQTQQAVAAAAAAVTQQLQQQQQA-----VVAQQAVVQQQQQQAAAV 108
Query: 464 LDGNCSRQAVDDKRDSRAAPSAQSVHAFESDN-----TKQSTSMVVFSYLPPSVDLQALS 300
+ +QAV + +A P+ S N T+ T+++V +YLP ++ +
Sbjct: 109 VQQAAVQQAVVPQ-PQQAQPNTNGNAGSGSQNGSNGSTETRTNLIV-NYLPQTMTEDEIR 166
Query: 299 NKMREVGEVK-----------FVDVL---------GMGRAIVSFFNVRDAERCVKFFDGS 180
+ VGE++ ++D L +G V++ +DAE+ V +G
Sbjct: 167 SLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGL 226
Query: 179 KVDGQTIEVKY 147
++ +TI+V +
Sbjct: 227 RLQNKTIKVSF 237
>AY118927-1|AAM50787.1| 374|Drosophila melanogaster LD23870p
protein.
Length = 374
Score = 33.1 bits (72), Expect = 0.52
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -3
Query: 272 KFVDVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAVADRR 111
+F G G A V + D E +K DG ++DGQ I V + ++ RR
Sbjct: 254 RFHPNFGRGVAFVEYATPEDCESAMKHMDGGQIDGQEITVSPVVLVKQRPPMRR 307
>AY051822-1|AAK93246.1| 483|Drosophila melanogaster LD33076p
protein.
Length = 483
Score = 33.1 bits (72), Expect = 0.52
Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 25/191 (13%)
Frame = -3
Query: 644 QPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDTSA 465
Q Q + V Q +T A AA + QQ AQ V+Q +Q + +
Sbjct: 54 QQQVQQAILQVQQQQTQQAVAAAAAAVTQQLQQQQQA-----VVAQQAVVQQQQQQAAAV 108
Query: 464 LDGNCSRQAVDDKRDSRAAPSAQSVHAFESDN-----TKQSTSMVVFSYLPPSVDLQALS 300
+ +QAV + +A P+ S N T+ T+++V +YLP ++ +
Sbjct: 109 VQQAAVQQAVVPQ-PQQAQPNTNGNAGSGSQNGSNGSTETRTNLIV-NYLPQTMTEDEIR 166
Query: 299 NKMREVGEVK-----------FVDVL---------GMGRAIVSFFNVRDAERCVKFFDGS 180
+ VGE++ ++D L +G V++ +DAE+ V +G
Sbjct: 167 SLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGL 226
Query: 179 KVDGQTIEVKY 147
++ +TI+V +
Sbjct: 227 RLQNKTIKVSF 237
>AL022139-2|CAB37430.1| 483|Drosophila melanogaster
EG:65F1.2,FBgn0000570;elav protein.
Length = 483
Score = 33.1 bits (72), Expect = 0.52
Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 25/191 (13%)
Frame = -3
Query: 644 QPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDTSA 465
Q Q + V Q +T A AA + QQ AQ V+Q +Q + +
Sbjct: 54 QQQVQQAILQVQQQQTQQAVAAAAAAVTQQLQQQQQA-----VVAQQAVVQQQQQQAAAV 108
Query: 464 LDGNCSRQAVDDKRDSRAAPSAQSVHAFESDN-----TKQSTSMVVFSYLPPSVDLQALS 300
+ +QAV + +A P+ S N T+ T+++V +YLP ++ +
Sbjct: 109 VQQAAVQQAVVPQ-PQQAQPNTNGNAGSGSQNGSNGSTETRTNLIV-NYLPQTMTEDEIR 166
Query: 299 NKMREVGEVK-----------FVDVL---------GMGRAIVSFFNVRDAERCVKFFDGS 180
+ VGE++ ++D L +G V++ +DAE+ V +G
Sbjct: 167 SLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGL 226
Query: 179 KVDGQTIEVKY 147
++ +TI+V +
Sbjct: 227 RLQNKTIKVSF 237
>AL022139-1|CAA18091.1| 479|Drosophila melanogaster
EG:65F1.2,FBgn0000570;elav protein.
Length = 479
Score = 33.1 bits (72), Expect = 0.52
Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 25/191 (13%)
Frame = -3
Query: 644 QPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDTSA 465
Q Q + V Q +T A AA + QQ AQ V+Q +Q + +
Sbjct: 50 QQQVQQAILQVQQQQTQQAVAAAAAAVTQQLQQQQQA-----VVAQQAVVQQQQQQAAAV 104
Query: 464 LDGNCSRQAVDDKRDSRAAPSAQSVHAFESDN-----TKQSTSMVVFSYLPPSVDLQALS 300
+ +QAV + +A P+ S N T+ T+++V +YLP ++ +
Sbjct: 105 VQQAAVQQAVVPQ-PQQAQPNTNGNAGSGSQNGSNGSTETRTNLIV-NYLPQTMTEDEIR 162
Query: 299 NKMREVGEVK-----------FVDVL---------GMGRAIVSFFNVRDAERCVKFFDGS 180
+ VGE++ ++D L +G V++ +DAE+ V +G
Sbjct: 163 SLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGL 222
Query: 179 KVDGQTIEVKY 147
++ +TI+V +
Sbjct: 223 RLQNKTIKVSF 233
>AJ459409-1|CAD30680.1| 374|Drosophila melanogaster RNA-binding
protein S1 protein.
Length = 374
Score = 33.1 bits (72), Expect = 0.52
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -3
Query: 272 KFVDVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAVADRR 111
+F G G A V + D E +K DG ++DGQ I V + ++ RR
Sbjct: 254 RFHPNFGRGVAFVEYATPEDCESAMKHMDGGQIDGQEITVSPVVLVKQRPPMRR 307
>AE014298-54|AAX52472.1| 479|Drosophila melanogaster CG4262-PB,
isoform B protein.
Length = 479
Score = 33.1 bits (72), Expect = 0.52
Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 25/191 (13%)
Frame = -3
Query: 644 QPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDTSA 465
Q Q + V Q +T A AA + QQ AQ V+Q +Q + +
Sbjct: 50 QQQVQQAILQVQQQQTQQAVAAAAAAVTQQLQQQQQA-----VVAQQAVVQQQQQQAAAV 104
Query: 464 LDGNCSRQAVDDKRDSRAAPSAQSVHAFESDN-----TKQSTSMVVFSYLPPSVDLQALS 300
+ +QAV + +A P+ S N T+ T+++V +YLP ++ +
Sbjct: 105 VQQAAVQQAVVPQ-PQQAQPNTNGNAGSGSQNGSNGSTETRTNLIV-NYLPQTMTEDEIR 162
Query: 299 NKMREVGEVK-----------FVDVL---------GMGRAIVSFFNVRDAERCVKFFDGS 180
+ VGE++ ++D L +G V++ +DAE+ V +G
Sbjct: 163 SLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGL 222
Query: 179 KVDGQTIEVKY 147
++ +TI+V +
Sbjct: 223 RLQNKTIKVSF 233
>AE014298-53|AAF45517.2| 483|Drosophila melanogaster CG4262-PA,
isoform A protein.
Length = 483
Score = 33.1 bits (72), Expect = 0.52
Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 25/191 (13%)
Frame = -3
Query: 644 QPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDTSA 465
Q Q + V Q +T A AA + QQ AQ V+Q +Q + +
Sbjct: 54 QQQVQQAILQVQQQQTQQAVAAAAAAVTQQLQQQQQA-----VVAQQAVVQQQQQQAAAV 108
Query: 464 LDGNCSRQAVDDKRDSRAAPSAQSVHAFESDN-----TKQSTSMVVFSYLPPSVDLQALS 300
+ +QAV + +A P+ S N T+ T+++V +YLP ++ +
Sbjct: 109 VQQAAVQQAVVPQ-PQQAQPNTNGNAGSGSQNGSNGSTETRTNLIV-NYLPQTMTEDEIR 166
Query: 299 NKMREVGEVK-----------FVDVL---------GMGRAIVSFFNVRDAERCVKFFDGS 180
+ VGE++ ++D L +G V++ +DAE+ V +G
Sbjct: 167 SLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGL 226
Query: 179 KVDGQTIEVKY 147
++ +TI+V +
Sbjct: 227 RLQNKTIKVSF 237
>AE014297-964|AAF54396.2| 374|Drosophila melanogaster CG16788-PA
protein.
Length = 374
Score = 33.1 bits (72), Expect = 0.52
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -3
Query: 272 KFVDVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKYXLKIRYAVADRR 111
+F G G A V + D E +K DG ++DGQ I V + ++ RR
Sbjct: 254 RFHPNFGRGVAFVEYATPEDCESAMKHMDGGQIDGQEITVSPVVLVKQRPPMRR 307
>X62599-1|CAA44483.1| 376|Drosophila melanogaster 52-kD bracketing
protein protein.
Length = 376
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = -3
Query: 347 VVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGR--AIVSFFNVRDAERCVKFFDGSKV 174
++ L V Q L + MR+ GEV + D R +V F ++ D + ++ D +++
Sbjct: 122 LIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTEL 181
Query: 173 DGQTIEV 153
+G+ I +
Sbjct: 182 NGRRIHL 188
>X58720-1|CAA41556.1| 350|Drosophila melanogaster SRp55 protein.
Length = 350
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = -3
Query: 347 VVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGR--AIVSFFNVRDAERCVKFFDGSKV 174
++ L V Q L + MR+ GEV + D R +V F ++ D + ++ D +++
Sbjct: 117 LIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTEL 176
Query: 173 DGQTIEV 153
+G+ I +
Sbjct: 177 NGRRIHL 183
>BT003286-1|AAO25044.1| 350|Drosophila melanogaster GM10155p
protein.
Length = 350
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = -3
Query: 347 VVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGR--AIVSFFNVRDAERCVKFFDGSKV 174
++ L V Q L + MR+ GEV + D R +V F ++ D + ++ D +++
Sbjct: 117 LIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTEL 176
Query: 173 DGQTIEV 153
+G+ I +
Sbjct: 177 NGRRIHL 183
>BT001495-1|AAN71250.1| 350|Drosophila melanogaster LD30815p
protein.
Length = 350
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = -3
Query: 347 VVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGR--AIVSFFNVRDAERCVKFFDGSKV 174
++ L V Q L + MR+ GEV + D R +V F ++ D + ++ D +++
Sbjct: 117 LIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTEL 176
Query: 173 DGQTIEV 153
+G+ I +
Sbjct: 177 NGRRIHL 183
>AY113327-1|AAM29332.1| 350|Drosophila melanogaster AT29232p
protein.
Length = 350
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = -3
Query: 347 VVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGR--AIVSFFNVRDAERCVKFFDGSKV 174
++ L V Q L + MR+ GEV + D R +V F ++ D + ++ D +++
Sbjct: 117 LIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTEL 176
Query: 173 DGQTIEV 153
+G+ I +
Sbjct: 177 NGRRIHL 183
>AE014297-1720|AAF54968.1| 329|Drosophila melanogaster CG10851-PB,
isoform B protein.
Length = 329
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = -3
Query: 347 VVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGR--AIVSFFNVRDAERCVKFFDGSKV 174
++ L V Q L + MR+ GEV + D R +V F ++ D + ++ D +++
Sbjct: 122 LIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTEL 181
Query: 173 DGQTIEV 153
+G+ I +
Sbjct: 182 NGRRIHL 188
>AE014297-1718|AAN13575.1| 350|Drosophila melanogaster CG10851-PC,
isoform C protein.
Length = 350
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = -3
Query: 347 VVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGR--AIVSFFNVRDAERCVKFFDGSKV 174
++ L V Q L + MR+ GEV + D R +V F ++ D + ++ D +++
Sbjct: 117 LIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTEL 176
Query: 173 DGQTIEV 153
+G+ I +
Sbjct: 177 NGRRIHL 183
>AE014297-1717|AAF54969.2| 350|Drosophila melanogaster CG10851-PA,
isoform A protein.
Length = 350
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = -3
Query: 347 VVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGR--AIVSFFNVRDAERCVKFFDGSKV 174
++ L V Q L + MR+ GEV + D R +V F ++ D + ++ D +++
Sbjct: 117 LIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTEL 176
Query: 173 DGQTIEV 153
+G+ I +
Sbjct: 177 NGRRIHL 183
>AE014296-1312|AAF50519.1| 249|Drosophila melanogaster CG13685-PA
protein.
Length = 249
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = -3
Query: 668 QXQIPVXVQPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNA 543
Q ++P + TNQT ++ PQ TSA A T GL M+N+
Sbjct: 98 QMKLPQQLVQQTNQT-ISDPQQPTSATATAATTRKGLGMVNS 138
>AY069584-1|AAL39729.1| 195|Drosophila melanogaster LD32469p
protein.
Length = 195
Score = 31.1 bits (67), Expect = 2.1
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = -3
Query: 338 SYLPPSVDLQALSNKMREVGEVKF----VDVLGMGRAIVSFFNVRDAERCVKFFDGSKVD 171
+Y DL+ + + EVG++ G A V F++ RDAE ++ DG +D
Sbjct: 31 TYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLD 90
Query: 170 GQTIEVK 150
G+ + V+
Sbjct: 91 GRELRVQ 97
>AF232775-1|AAF43415.1| 195|Drosophila melanogaster SR family
splicing factor SC35 protein.
Length = 195
Score = 31.1 bits (67), Expect = 2.1
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = -3
Query: 338 SYLPPSVDLQALSNKMREVGEVKF----VDVLGMGRAIVSFFNVRDAERCVKFFDGSKVD 171
+Y DL+ + + EVG++ G A V F++ RDAE ++ DG +D
Sbjct: 31 TYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLD 90
Query: 170 GQTIEVK 150
G+ + V+
Sbjct: 91 GRELRVQ 97
>AE014134-2203|AAF53192.1| 195|Drosophila melanogaster CG5442-PB,
isoform B protein.
Length = 195
Score = 31.1 bits (67), Expect = 2.1
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = -3
Query: 338 SYLPPSVDLQALSNKMREVGEVKF----VDVLGMGRAIVSFFNVRDAERCVKFFDGSKVD 171
+Y DL+ + + EVG++ G A V F++ RDAE ++ DG +D
Sbjct: 31 TYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLD 90
Query: 170 GQTIEVK 150
G+ + V+
Sbjct: 91 GRELRVQ 97
>AF281363-1|AAK12372.1| 1854|Drosophila melanogaster virilizer
protein.
Length = 1854
Score = 29.1 bits (62), Expect = 8.4
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 442 RRSTISETAGPPPPRSPYTH 383
RRST S PPPPR +TH
Sbjct: 218 RRSTHSTDHSPPPPRRSHTH 237
>AE014135-25|AAN06556.2| 1314|Drosophila melanogaster CG32000-PB,
isoform B protein.
Length = 1314
Score = 29.1 bits (62), Expect = 8.4
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 451 QLPSSAEVSSNCLVWMTFHCALVWSQRDTCWAFIMARPY 567
Q+P S+ +SS L + H +V + + TCW + +P+
Sbjct: 1088 QVPLSSLISSTPLASLLLHLTVVTAFQVTCWVHLHQQPW 1126
>AE014135-24|AAN06554.2| 1314|Drosophila melanogaster CG32000-PA,
isoform A protein.
Length = 1314
Score = 29.1 bits (62), Expect = 8.4
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 451 QLPSSAEVSSNCLVWMTFHCALVWSQRDTCWAFIMARPY 567
Q+P S+ +SS L + H +V + + TCW + +P+
Sbjct: 1088 QVPLSSLISSTPLASLLLHLTVVTAFQVTCWVHLHQQPW 1126
>AE014135-22|AAS64610.1| 1388|Drosophila melanogaster CG32000-PG,
isoform G protein.
Length = 1388
Score = 29.1 bits (62), Expect = 8.4
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 451 QLPSSAEVSSNCLVWMTFHCALVWSQRDTCWAFIMARPY 567
Q+P S+ +SS L + H +V + + TCW + +P+
Sbjct: 1162 QVPLSSLISSTPLASLLLHLTVVTAFQVTCWVHLHQQPW 1200
>AE013599-3583|AAF46988.1| 1854|Drosophila melanogaster CG3496-PA
protein.
Length = 1854
Score = 29.1 bits (62), Expect = 8.4
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 442 RRSTISETAGPPPPRSPYTH 383
RRST S PPPPR +TH
Sbjct: 218 RRSTHSTDHSPPPPRRSHTH 237
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,215,447
Number of Sequences: 53049
Number of extensions: 643136
Number of successful extensions: 2778
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 2510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2769
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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