Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_J20
         (848 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094737-1|AAM11090.1|  828|Drosophila melanogaster GH28553p pro...    30   4.6  
AE014297-3729|AAF56407.3|  828|Drosophila melanogaster CG11848-P...    30   4.6  
AY051928-1|AAK93352.1|  501|Drosophila melanogaster LD41209p pro...    29   8.1  
AE014296-2490|AAF49655.1|  501|Drosophila melanogaster CG6876-PA...    29   8.1  

>AY094737-1|AAM11090.1|  828|Drosophila melanogaster GH28553p
           protein.
          Length = 828

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 250 PRHLARVPHHQLHAERHLPHRAEGHVRHLQRE 345
           P+H A  PH Q H  +H P   + H +H Q +
Sbjct: 147 PQHQAHQPHQQPHQHQH-PQHQQQHQQHQQHQ 177


>AE014297-3729|AAF56407.3|  828|Drosophila melanogaster CG11848-PA
           protein.
          Length = 828

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 250 PRHLARVPHHQLHAERHLPHRAEGHVRHLQRE 345
           P+H A  PH Q H  +H P   + H +H Q +
Sbjct: 147 PQHQAHQPHQQPHQHQH-PQHQQQHQQHQQHQ 177


>AY051928-1|AAK93352.1|  501|Drosophila melanogaster LD41209p
           protein.
          Length = 501

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = -3

Query: 336 KVANVPLRSVWEVSLRMELVVGDAREVPWPRAADVHVRAVLADTCPDLTRVVARL 172
           K++ +P  +V  +  + + + G ++    P    V+   ++ DT PDL R  ARL
Sbjct: 248 KLSKMPACNVQVLGAQKKTLSGFSQTQMLPHTGYVYYSQIVQDTAPDLRRKAARL 302


>AE014296-2490|AAF49655.1|  501|Drosophila melanogaster CG6876-PA
           protein.
          Length = 501

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = -3

Query: 336 KVANVPLRSVWEVSLRMELVVGDAREVPWPRAADVHVRAVLADTCPDLTRVVARL 172
           K++ +P  +V  +  + + + G ++    P    V+   ++ DT PDL R  ARL
Sbjct: 248 KLSKMPACNVQVLGAQKKTLSGFSQTQMLPHTGYVYYSQIVQDTAPDLRRKAARL 302


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,640,701
Number of Sequences: 53049
Number of extensions: 468534
Number of successful extensions: 1380
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1366
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4065385896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)