Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_J16
(785 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0768 - 22988119-22988223,22988337-22988558,22988645-229888... 83 3e-16
08_01_0101 + 725972-726200,726407-726675,726927-727049,727742-72... 33 0.34
05_04_0188 - 18883979-18884250,18885046-18885666,18885762-188858... 32 0.59
05_03_0079 + 8212648-8212724,8212844-8212993,8213211-8213351,821... 31 0.79
01_05_0265 + 20188160-20188211,20188291-20189019,20189103-201892... 31 0.79
11_06_0621 + 25587476-25587604,25588230-25588423,25588800-255888... 31 1.0
09_01_0019 + 403078-404211 31 1.0
02_05_0114 + 25958834-25961296 31 1.0
06_03_1507 - 30646168-30646254,30646350-30646490,30648109-306482... 30 1.8
08_02_0323 - 15765631-15765903 29 4.2
05_05_0214 + 23319507-23321540 29 5.5
02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178 29 5.5
07_01_0010 + 72162-74303,74470-74545,75971-76043,76496-76540,779... 28 7.3
06_03_1159 + 28084786-28085428,28085520-28086166 28 7.3
06_01_0005 - 125809-126339 28 7.3
01_06_1107 + 34568091-34568341,34568455-34568540,34569204-345692... 28 7.3
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 28 9.7
03_06_0741 + 35893538-35895600,35896274-35896474,35896701-358968... 28 9.7
01_06_1446 - 37409074-37409783,37409896-37409986,37410645-374119... 28 9.7
>12_02_0768 - 22988119-22988223,22988337-22988558,22988645-22988810,
22989176-22989181,22989281-22989453,22989737-22989928,
22990034-22990211,22990302-22990444,22990666-22990755,
22990869-22990991,22991391-22991568,22992213-22992442,
22992557-22992616,22992731-22992798,22992908-22992953
Length = 659
Score = 82.6 bits (195), Expect = 3e-16
Identities = 52/177 (29%), Positives = 89/177 (50%), Gaps = 3/177 (1%)
Frame = -1
Query: 656 SRPAASARCP*SWSGATWRSPSAKEPAVPRALAXYIVSSYVELRRE-ARNARDVTFTSAR 480
+R A A +W A + P+VPR L YI ++Y +R+E A++ ++T+ R
Sbjct: 482 ARTAVLAAANPAWGRAYISTARRVVPSVPRELEEYIATAYSSIRQEEAKSNAPHSYTTIR 541
Query: 479 NXXXXXXXXXXXXXXXLSDVVEKEDVSEAIRHVEMSKQSLQHVEENVQRGITSTDRIFAI 300
S+ V + DV EA+R ++MSK SL + ++ + G+ + I++I
Sbjct: 542 TLLSILRISIALARLRFSETVAQSDVDEALRLMQMSKYSL-YSDDRQRSGLDAISDIYSI 600
Query: 299 VRDLAGSNKT--VKVADVIERCVDKGFKPDQVDACIEEYENLNVWQVNQVRTKITFM 135
+RD A + V+ A + KG+ Q+ C+EEY +LNVWQ++ I F+
Sbjct: 601 LRDEAARTNSMDVRYAHALNLISRKGYSEAQLKECLEEYASLNVWQIHPNTFDIHFI 657
>08_01_0101 +
725972-726200,726407-726675,726927-727049,727742-728248
Length = 375
Score = 32.7 bits (71), Expect = 0.34
Identities = 22/99 (22%), Positives = 43/99 (43%)
Frame = +1
Query: 370 FDIST*RIAXXXXXXXXXXXNLSLASAVERRSMASKFLADVNVTSRAFLASRRSSTYEET 549
FDI T R A LS ++ +M ++ ++++ R + + T
Sbjct: 169 FDIVTGRQASICTAYAIGTSCLSAGDEIKVHTMRKLYVEEISLC-RVYKRPGIEDNFHLT 227
Query: 550 MXSASARGTAGSLALGERHVAPDQLHGQRADAAGRLGPI 666
+ + G+ + A+G++H A ++ A AA RL P+
Sbjct: 228 GTTTKSSGSKAAAAMGKKHAAANRTSSTAAAAAPRLAPM 266
>05_04_0188 -
18883979-18884250,18885046-18885666,18885762-18885887,
18886007-18886265
Length = 425
Score = 31.9 bits (69), Expect = 0.59
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 595 GERHVAPDQLHGQRADAAGRLGPIAGAHTLCASPA 699
GE+ V Q+ G DA GR+G GA T A A
Sbjct: 372 GEKRVCSSQMRGCETDAGGRIGQPIGASTTAAQRA 406
>05_03_0079 +
8212648-8212724,8212844-8212993,8213211-8213351,
8213658-8213820,8213901-8214094,8214174-8214369,
8214462-8214539,8214933-8215162,8215574-8215688,
8215878-8215952,8216032-8216172,8216309-8216512,
8216586-8216747,8216787-8216794,8217099-8217223,
8217316-8217438,8218177-8218307,8218527-8218658
Length = 814
Score = 31.5 bits (68), Expect = 0.79
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -2
Query: 748 DLLWLIQDKPNREKDLELAKHIAYVHQQLDPA 653
DL++++ D+P+ D +A HI VHQ+ + A
Sbjct: 534 DLVYIMIDEPDENTDYHIAHHIVRVHQKREEA 565
>01_05_0265 +
20188160-20188211,20188291-20189019,20189103-20189231,
20189857-20189938,20190034-20190166,20190269-20190340,
20190478-20190573,20190651-20190764,20190838-20191050,
20191144-20191242,20191328-20191488,20191589-20191685,
20191828-20191989,20192068-20192148,20192242-20192320,
20192414-20192550,20192638-20192688,20192776-20192844,
20193583-20193700,20194142-20194197
Length = 909
Score = 31.5 bits (68), Expect = 0.79
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -2
Query: 748 DLLWLIQDKPNREKDLELAKHIAYVH 671
DL++LI DK + + D LAKHI +H
Sbjct: 629 DLIYLILDKADEQTDRRLAKHIVSLH 654
>11_06_0621 + 25587476-25587604,25588230-25588423,25588800-25588874,
25589434-25591852
Length = 938
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/48 (25%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -1
Query: 350 EENVQRGITSTDRIF-AIVRDLAGSNKTVKVADVIERCVDKGFKPDQV 210
+E +Q+G+T + A++ + K D+++ +DKG +PD++
Sbjct: 872 DEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDEL 919
>09_01_0019 + 403078-404211
Length = 377
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = -3
Query: 348 RKRSEGYNVNGPYIRDSARPGRLQQDRQSRRCHREVRRQRIQTRSGGRLHRRIRELER 175
RKR E + + D R + ++DR+ RR HR + SGG RR R +R
Sbjct: 257 RKRHERSDEDSESDSDKKRHRKSRKDRKRRRSHRRSDDTSDEDESGGEDRRRRRHRKR 314
>02_05_0114 + 25958834-25961296
Length = 820
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/48 (25%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -1
Query: 350 EENVQRGITSTDRIF-AIVRDLAGSNKTVKVADVIERCVDKGFKPDQV 210
+E +Q+G+T + A++ + K D+++ +DKG +PD++
Sbjct: 754 DEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDEL 801
>06_03_1507 -
30646168-30646254,30646350-30646490,30648109-30648202,
30648445-30648509,30648934-30649176,30649442-30649499,
30649957-30650037,30650323-30650533,30650975-30651141,
30651216-30651268,30651600-30651681,30651765-30651914,
30652027-30652111,30652189-30652393,30652502-30652573,
30652911-30653456
Length = 779
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -2
Query: 751 LDLLW-LIQDKPNREKDLELAKHIAYVHQQLDPAAQ 647
LD+ W +++DK + + L L+K +A H+ DP Q
Sbjct: 624 LDVRWRVLKDKSSADSKLVLSKAVAIFHESFDPIIQ 659
>08_02_0323 - 15765631-15765903
Length = 90
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +1
Query: 556 SASARGTAGSLALGERHVAPDQLHGQRADAAGR--LGPIAGAHTLCA 690
S+S R A +LAL ERH + G R+ AAGR + AH L A
Sbjct: 30 SSSTRALALALALAERHRLSEVGGGDRSVAAGRRSFQGLIPAHVLSA 76
>05_05_0214 + 23319507-23321540
Length = 677
Score = 28.7 bits (61), Expect = 5.5
Identities = 23/50 (46%), Positives = 24/50 (48%)
Frame = -1
Query: 647 AASARCP*SWSGATWRSPSAKEPAVPRALAXYIVSSYVELRREARNARDV 498
A A C SGATWR AKE A L+ V SY RR RN R V
Sbjct: 461 AVEAICHAMGSGATWR---AKENAAATVLSLASVHSY--RRRLGRNPRVV 505
>02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178
Length = 1143
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +2
Query: 329 YPSERFLPRVVGIALTSPRDELPQIRPPFQRR 424
+P E PRVV A R+ PQIRPP +RR
Sbjct: 1070 FPVEEKRPRVVAEA--QERETGPQIRPPCRRR 1099
>07_01_0010 +
72162-74303,74470-74545,75971-76043,76496-76540,
77916-78116,78463-78541,78637-78678,78788-78847,
79087-80484,80777-80902,81037-81300
Length = 1501
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = -1
Query: 425 DVVEKEDVSEAIRHVEMSKQSLQHVEENVQRGITSTDRIF-AIVRDLAGSNKTVKVADVI 249
DVV + + M ++++ ++ + +G D + I+ + + +++
Sbjct: 254 DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELL 313
Query: 248 ERCVDKGFKPDQVDAC 201
+ V KGF PDQV C
Sbjct: 314 KDAVFKGFVPDQVTYC 329
>06_03_1159 + 28084786-28085428,28085520-28086166
Length = 429
Score = 28.3 bits (60), Expect = 7.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -3
Query: 210 GRLHRRIRELERVASEPGAD 151
GR+HR + L+ VA++PG D
Sbjct: 377 GRIHRPLENLQEVAAQPGFD 396
>06_01_0005 - 125809-126339
Length = 176
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -3
Query: 306 RDSAR-PGRLQQDRQSRRCHREVRRQRIQTRSGGRLHRR 193
RD R P R R RCHR RR+ + R GG R
Sbjct: 138 RDPGRVPARGGDPRDQWRCHRRWRRRARRGRGGGTTRSR 176
>01_06_1107 +
34568091-34568341,34568455-34568540,34569204-34569292,
34569406-34569530,34569825-34569901,34570210-34570862
Length = 426
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = -1
Query: 692 EAHSVCAPAIGPSRPAASARCP*SWSGATWRSPSAKEPAVPRALAXYIVSS 540
+ S+ A GP+ AA+A P A R+PSA A Y +SS
Sbjct: 368 DVESLFLDAPGPAAAAAAAAMPDDVERAVQRAPSAASRRANAAAVSYAISS 418
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/45 (24%), Positives = 24/45 (53%)
Frame = -1
Query: 278 NKTVKVADVIERCVDKGFKPDQVDACIEEYENLNVWQVNQVRTKI 144
+ + ++AD + + KG D +D C+E + L+ ++VR +
Sbjct: 3725 DSSAQIADCEDLLLRKGTTVDDLDGCVEGHSGLSTHSNDEVRNLV 3769
>03_06_0741 +
35893538-35895600,35896274-35896474,35896701-35896814,
35897570-35897649,35897772-35897896,35898008-35898079
Length = 884
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -1
Query: 368 QSLQHVEENVQRGITSTDRIFAIVRDLAGSNKTVKVA-DVIERCVDKGFKPD 216
++LQ E V+ GI + IV G ++ A DV+E + KG KPD
Sbjct: 440 RALQLFAEMVESGIEPNIMSYTIVIQCLGKAGRIQEAVDVLEAGMAKGLKPD 491
>01_06_1446 -
37409074-37409783,37409896-37409986,37410645-37411988,
37412062-37412709,37412801-37412852,37413141-37413214,
37414370-37414419,37414488-37414569,37414779-37414828,
37414907-37414949,37415030-37415110,37415198-37415243,
37415336-37415382,37415467-37415532,37415612-37415678,
37415761-37415858
Length = 1182
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -1
Query: 410 EDVSEAIRHVEMSKQSLQHVEENVQRGITSTD--RIFAIVRD 291
EDV IRH Q V EN + G+ S+D ++ +VR+
Sbjct: 760 EDVIHVIRHSSFRVCGEQAVAENAEMGVQSSDVGKLLNVVRE 801
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,572,885
Number of Sequences: 37544
Number of extensions: 402243
Number of successful extensions: 1598
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1597
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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