Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_T7_J16
(785 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X74796-1|CAA52803.1| 617|Homo sapiens p85Mcm protein protein. 139 9e-33
D55716-1|BAA09534.1| 719|Homo sapiens P1cdc47 protein. 139 9e-33
D28480-1|BAA05839.1| 543|Homo sapiens hMCM2 protein. 139 9e-33
BC013375-1|AAH13375.1| 719|Homo sapiens minichromosome maintena... 139 9e-33
AY007130-1|AAG01994.1| 351|Homo sapiens protein ( Homo sapiens ... 139 9e-33
BC009398-1|AAH09398.1| 389|Homo sapiens MCM7 protein protein. 73 1e-12
D50487-1|BAA09078.1| 1220|Homo sapiens RNA helicase protein. 35 0.38
BC047327-1|AAH47327.2| 1220|Homo sapiens DEAH (Asp-Glu-Ala-His) ... 35 0.38
BC044586-1|AAH44586.2| 1220|Homo sapiens DEAH (Asp-Glu-Ala-His) ... 35 0.38
X74795-1|CAA52802.2| 734|Homo sapiens P1 Cdc46 protein. 32 2.0
CR456517-1|CAG30403.1| 734|Homo sapiens MCM5 protein. 32 2.0
BC003656-1|AAH03656.1| 734|Homo sapiens minichromosome maintena... 32 2.0
BC000142-1|AAH00142.1| 734|Homo sapiens minichromosome maintena... 32 2.0
AY212028-1|AAO21127.1| 734|Homo sapiens MCM5 minichromosome mai... 32 2.0
AK223323-1|BAD97043.1| 734|Homo sapiens minichromosome maintena... 32 2.0
AF093119-1|AAC62108.1| 439|Homo sapiens UPH1 protein. 32 2.0
AB209612-1|BAD92849.1| 418|Homo sapiens minichromosome maintena... 32 2.0
BC014550-1|AAH14550.1| 461|Homo sapiens NT5DC2 protein protein. 31 3.6
AK023995-1|BAB14763.1| 520|Homo sapiens protein ( Homo sapiens ... 31 3.6
AK022504-1|BAB14064.1| 486|Homo sapiens protein ( Homo sapiens ... 31 3.6
AF131781-1|AAD20044.1| 390|Homo sapiens Unknown protein. 31 3.6
>X74796-1|CAA52803.1| 617|Homo sapiens p85Mcm protein protein.
Length = 617
Score = 139 bits (337), Expect = 9e-33
Identities = 71/151 (47%), Positives = 95/151 (62%)
Frame = -1
Query: 587 KEPAVPRALAXYIVSSYVELRREARNARDVTFTSARNXXXXXXXXXXXXXXXLSDVVEKE 408
K+P VP +LA YI ++YVE+RREA ++D T+TSAR + DVVEKE
Sbjct: 467 KQPMVPESLADYITAAYVEMRREAWASKDATYTSARTLLAILRLSTALARLRMVDVVEKE 526
Query: 407 DVSEAIRHVEMSKQSLQHVEENVQRGITSTDRIFAIVRDLAGSNKTVKVADVIERCVDKG 228
DV+EAIR +EMSK SL + R D IFA VR+L ++V+ ++ +RCV +G
Sbjct: 527 DVNEAIRLMEMSKDSLLGDKGQTARTQRPADVIFATVRELVSGGRSVRFSEAEQRCVSRG 586
Query: 227 FKPDQVDACIEEYENLNVWQVNQVRTKITFM 135
F P Q A ++EYE LNVWQVN RT+ITF+
Sbjct: 587 FTPAQFQAALDEYEELNVWQVNASRTRITFV 617
Score = 52.0 bits (119), Expect = 2e-06
Identities = 23/38 (60%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = -2
Query: 748 DLLWLIQDKPNREKDLELAKHIAYVHQ-QLDPAAQQRP 638
DLLWLIQD+P+R+ DL LA+HI YVHQ P +Q P
Sbjct: 414 DLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPSQFEP 451
Score = 31.5 bits (68), Expect = 3.6
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 657 QPPSSVRALSMKLVRRYVALTKRQ 586
QPPS L MKL+RRY+A+ + +
Sbjct: 444 QPPSQFEPLDMKLMRRYIAMCREK 467
>D55716-1|BAA09534.1| 719|Homo sapiens P1cdc47 protein.
Length = 719
Score = 139 bits (337), Expect = 9e-33
Identities = 71/151 (47%), Positives = 95/151 (62%)
Frame = -1
Query: 587 KEPAVPRALAXYIVSSYVELRREARNARDVTFTSARNXXXXXXXXXXXXXXXLSDVVEKE 408
K+P VP +LA YI ++YVE+RREA ++D T+TSAR + DVVEKE
Sbjct: 569 KQPMVPESLADYITAAYVEMRREAWASKDATYTSARTLLAILRLSTALARLRMVDVVEKE 628
Query: 407 DVSEAIRHVEMSKQSLQHVEENVQRGITSTDRIFAIVRDLAGSNKTVKVADVIERCVDKG 228
DV+EAIR +EMSK SL + R D IFA VR+L ++V+ ++ +RCV +G
Sbjct: 629 DVNEAIRLMEMSKDSLLGDKGQTARTQRPADVIFATVRELVSGGRSVRFSEAEQRCVSRG 688
Query: 227 FKPDQVDACIEEYENLNVWQVNQVRTKITFM 135
F P Q A ++EYE LNVWQVN RT+ITF+
Sbjct: 689 FTPAQFQAALDEYEELNVWQVNASRTRITFV 719
Score = 52.0 bits (119), Expect = 2e-06
Identities = 23/38 (60%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = -2
Query: 748 DLLWLIQDKPNREKDLELAKHIAYVHQ-QLDPAAQQRP 638
DLLWLIQD+P+R+ DL LA+HI YVHQ P +Q P
Sbjct: 516 DLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPSQFEP 553
Score = 31.5 bits (68), Expect = 3.6
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 657 QPPSSVRALSMKLVRRYVALTKRQ 586
QPPS L MKL+RRY+A+ + +
Sbjct: 546 QPPSQFEPLDMKLMRRYIAMCREK 569
>D28480-1|BAA05839.1| 543|Homo sapiens hMCM2 protein.
Length = 543
Score = 139 bits (337), Expect = 9e-33
Identities = 71/151 (47%), Positives = 95/151 (62%)
Frame = -1
Query: 587 KEPAVPRALAXYIVSSYVELRREARNARDVTFTSARNXXXXXXXXXXXXXXXLSDVVEKE 408
K+P VP +LA YI ++YVE+RREA ++D T+TSAR + DVVEKE
Sbjct: 393 KQPMVPESLADYITAAYVEMRREAWASKDATYTSARTLLAILRLSTALARLRMVDVVEKE 452
Query: 407 DVSEAIRHVEMSKQSLQHVEENVQRGITSTDRIFAIVRDLAGSNKTVKVADVIERCVDKG 228
DV+EAIR +EMSK SL + R D IFA VR+L ++V+ ++ +RCV +G
Sbjct: 453 DVNEAIRLMEMSKDSLLGDKGQTARTQRPADVIFATVRELVSGGRSVRFSEAEQRCVSRG 512
Query: 227 FKPDQVDACIEEYENLNVWQVNQVRTKITFM 135
F P Q A ++EYE LNVWQVN RT+ITF+
Sbjct: 513 FTPAQFQAALDEYEELNVWQVNASRTRITFV 543
Score = 52.0 bits (119), Expect = 2e-06
Identities = 23/38 (60%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = -2
Query: 748 DLLWLIQDKPNREKDLELAKHIAYVHQ-QLDPAAQQRP 638
DLLWLIQD+P+R+ DL LA+HI YVHQ P +Q P
Sbjct: 340 DLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPSQFEP 377
Score = 31.5 bits (68), Expect = 3.6
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 657 QPPSSVRALSMKLVRRYVALTKRQ 586
QPPS L MKL+RRY+A+ + +
Sbjct: 370 QPPSQFEPLDMKLMRRYIAMCREK 393
>BC013375-1|AAH13375.1| 719|Homo sapiens minichromosome maintenance
complex component 7 protein.
Length = 719
Score = 139 bits (337), Expect = 9e-33
Identities = 71/151 (47%), Positives = 95/151 (62%)
Frame = -1
Query: 587 KEPAVPRALAXYIVSSYVELRREARNARDVTFTSARNXXXXXXXXXXXXXXXLSDVVEKE 408
K+P VP +LA YI ++YVE+RREA ++D T+TSAR + DVVEKE
Sbjct: 569 KQPMVPESLADYITAAYVEMRREAWASKDATYTSARTLLAILRLSTALARLRMVDVVEKE 628
Query: 407 DVSEAIRHVEMSKQSLQHVEENVQRGITSTDRIFAIVRDLAGSNKTVKVADVIERCVDKG 228
DV+EAIR +EMSK SL + R D IFA VR+L ++V+ ++ +RCV +G
Sbjct: 629 DVNEAIRLMEMSKDSLLGDKGQTARTQRPADVIFATVRELVSGGRSVRFSEAEQRCVSRG 688
Query: 227 FKPDQVDACIEEYENLNVWQVNQVRTKITFM 135
F P Q A ++EYE LNVWQVN RT+ITF+
Sbjct: 689 FTPAQFQAALDEYEELNVWQVNASRTRITFV 719
Score = 52.0 bits (119), Expect = 2e-06
Identities = 23/38 (60%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = -2
Query: 748 DLLWLIQDKPNREKDLELAKHIAYVHQ-QLDPAAQQRP 638
DLLWLIQD+P+R+ DL LA+HI YVHQ P +Q P
Sbjct: 516 DLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPSQFEP 553
Score = 31.5 bits (68), Expect = 3.6
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 657 QPPSSVRALSMKLVRRYVALTKRQ 586
QPPS L MKL+RRY+A+ + +
Sbjct: 546 QPPSQFEPLDMKLMRRYIAMCREK 569
>AY007130-1|AAG01994.1| 351|Homo sapiens protein ( Homo sapiens
clone CDABP0042 mRNA sequence. ).
Length = 351
Score = 139 bits (337), Expect = 9e-33
Identities = 71/151 (47%), Positives = 95/151 (62%)
Frame = -1
Query: 587 KEPAVPRALAXYIVSSYVELRREARNARDVTFTSARNXXXXXXXXXXXXXXXLSDVVEKE 408
K+P VP +LA YI ++YVE+RREA ++D T+TSAR + DVVEKE
Sbjct: 201 KQPMVPESLADYITAAYVEMRREAWASKDATYTSARTLLAILRLSTALARLRMVDVVEKE 260
Query: 407 DVSEAIRHVEMSKQSLQHVEENVQRGITSTDRIFAIVRDLAGSNKTVKVADVIERCVDKG 228
DV+EAIR +EMSK SL + R D IFA VR+L ++V+ ++ +RCV +G
Sbjct: 261 DVNEAIRLMEMSKDSLLGDKGQTARTQRPADVIFATVRELVSGGRSVRFSEAEQRCVSRG 320
Query: 227 FKPDQVDACIEEYENLNVWQVNQVRTKITFM 135
F P Q A ++EYE LNVWQVN RT+ITF+
Sbjct: 321 FTPAQFQAALDEYEELNVWQVNASRTRITFV 351
Score = 52.0 bits (119), Expect = 2e-06
Identities = 23/38 (60%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = -2
Query: 748 DLLWLIQDKPNREKDLELAKHIAYVHQ-QLDPAAQQRP 638
DLLWLIQD+P+R+ DL LA+HI YVHQ P +Q P
Sbjct: 148 DLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPSQFEP 185
Score = 31.5 bits (68), Expect = 3.6
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 657 QPPSSVRALSMKLVRRYVALTKRQ 586
QPPS L MKL+RRY+A+ + +
Sbjct: 178 QPPSQFEPLDMKLMRRYIAMCREK 201
>BC009398-1|AAH09398.1| 389|Homo sapiens MCM7 protein protein.
Length = 389
Score = 72.9 bits (171), Expect = 1e-12
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = -1
Query: 317 DRIFAIVRDLAGSNKTVKVADVIERCVDKGFKPDQVDACIEEYENLNVWQVNQVRTKITF 138
D IFA VR+L ++V+ ++ +RCV +GF P Q A ++EYE LNVWQVN RT+ITF
Sbjct: 329 DVIFATVRELVSGGRSVRFSEAEQRCVSRGFTPAQFQAALDEYEELNVWQVNASRTRITF 388
Query: 137 M 135
+
Sbjct: 389 V 389
>D50487-1|BAA09078.1| 1220|Homo sapiens RNA helicase protein.
Length = 1220
Score = 34.7 bits (76), Expect = 0.38
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = -3
Query: 357 TRGRKRSEGYNVNGPYIRDSARPGRLQQDRQSRRCHREVRRQRIQTRSGGRLHRRIRELE 178
T+ +KRS + N RD R +DR +R HR R R +TR ++ R R
Sbjct: 171 TKKKKRSRSRDRN----RDRDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRYRSRS 226
Query: 177 RVASEPGADQD 145
R S P +D
Sbjct: 227 RSQSPPKDRKD 237
>BC047327-1|AAH47327.2| 1220|Homo sapiens DEAH (Asp-Glu-Ala-His) box
polypeptide 8 protein.
Length = 1220
Score = 34.7 bits (76), Expect = 0.38
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = -3
Query: 357 TRGRKRSEGYNVNGPYIRDSARPGRLQQDRQSRRCHREVRRQRIQTRSGGRLHRRIRELE 178
T+ +KRS + N RD R +DR +R HR R R +TR ++ R R
Sbjct: 171 TKKKKRSRSRDRN----RDRDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRYRSRS 226
Query: 177 RVASEPGADQD 145
R S P +D
Sbjct: 227 RSQSPPKDRKD 237
>BC044586-1|AAH44586.2| 1220|Homo sapiens DEAH (Asp-Glu-Ala-His) box
polypeptide 8 protein.
Length = 1220
Score = 34.7 bits (76), Expect = 0.38
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = -3
Query: 357 TRGRKRSEGYNVNGPYIRDSARPGRLQQDRQSRRCHREVRRQRIQTRSGGRLHRRIRELE 178
T+ +KRS + N RD R +DR +R HR R R +TR ++ R R
Sbjct: 171 TKKKKRSRSRDRN----RDRDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRYRSRS 226
Query: 177 RVASEPGADQD 145
R S P +D
Sbjct: 227 RSQSPPKDRKD 237
>X74795-1|CAA52802.2| 734|Homo sapiens P1 Cdc46 protein.
Length = 734
Score = 32.3 bits (70), Expect = 2.0
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = -2
Query: 748 DLLWLIQDKPNREKDLELAKHIAYVH 671
D++++++D+ N E+D+ LAKH+ +H
Sbjct: 515 DMIFIVKDEHNEERDVMLAKHVITLH 540
>CR456517-1|CAG30403.1| 734|Homo sapiens MCM5 protein.
Length = 734
Score = 32.3 bits (70), Expect = 2.0
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = -2
Query: 748 DLLWLIQDKPNREKDLELAKHIAYVH 671
D++++++D+ N E+D+ LAKH+ +H
Sbjct: 515 DMIFIVKDEHNEERDVMLAKHVITLH 540
>BC003656-1|AAH03656.1| 734|Homo sapiens minichromosome maintenance
complex component 5 protein.
Length = 734
Score = 32.3 bits (70), Expect = 2.0
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = -2
Query: 748 DLLWLIQDKPNREKDLELAKHIAYVH 671
D++++++D+ N E+D+ LAKH+ +H
Sbjct: 515 DMIFIVKDEHNEERDVMLAKHVITLH 540
>BC000142-1|AAH00142.1| 734|Homo sapiens minichromosome maintenance
complex component 5 protein.
Length = 734
Score = 32.3 bits (70), Expect = 2.0
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = -2
Query: 748 DLLWLIQDKPNREKDLELAKHIAYVH 671
D++++++D+ N E+D+ LAKH+ +H
Sbjct: 515 DMIFIVKDEHNEERDVMLAKHVITLH 540
>AY212028-1|AAO21127.1| 734|Homo sapiens MCM5 minichromosome
maintenance deficient 5, cell division cycle 46 (S.
cerevis protein.
Length = 734
Score = 32.3 bits (70), Expect = 2.0
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = -2
Query: 748 DLLWLIQDKPNREKDLELAKHIAYVH 671
D++++++D+ N E+D+ LAKH+ +H
Sbjct: 515 DMIFIVKDEHNEERDVMLAKHVITLH 540
>AK223323-1|BAD97043.1| 734|Homo sapiens minichromosome maintenance
deficient protein 5 variant protein.
Length = 734
Score = 32.3 bits (70), Expect = 2.0
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = -2
Query: 748 DLLWLIQDKPNREKDLELAKHIAYVH 671
D++++++D+ N E+D+ LAKH+ +H
Sbjct: 515 DMIFIVKDEHNEERDVMLAKHVITLH 540
>AF093119-1|AAC62108.1| 439|Homo sapiens UPH1 protein.
Length = 439
Score = 32.3 bits (70), Expect = 2.0
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = -1
Query: 407 DVSEAIRHVEMSKQSLQHVEENVQRGITSTDRIFAIVRDLAGSNKTVKVADVIERCVDKG 228
DV+E + E K ++ + N G R A++ DL G V V + + G
Sbjct: 51 DVNECLTIPEACKGEMKCI--NHYGGYLCLPRSAAVINDLHGEGPPPPVPPVNTQPLPTG 108
Query: 227 FKPDQVDACIE 195
++PD D+C++
Sbjct: 109 YEPDDQDSCVD 119
>AB209612-1|BAD92849.1| 418|Homo sapiens minichromosome maintenance
deficient protein 5 variant protein.
Length = 418
Score = 32.3 bits (70), Expect = 2.0
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = -2
Query: 748 DLLWLIQDKPNREKDLELAKHIAYVH 671
D++++++D+ N E+D+ LAKH+ +H
Sbjct: 232 DMIFIVKDEHNEERDVMLAKHVITLH 257
>BC014550-1|AAH14550.1| 461|Homo sapiens NT5DC2 protein protein.
Length = 461
Score = 31.5 bits (68), Expect = 3.6
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -1
Query: 410 EDVSEAIRHVEMSKQSLQHVEENVQRGITSTDRIFAIVRDLAGSNKTV-KVADVIERCVD 234
+DV++AIR V + Q +E+++++ I D FA++ L K + + + VD
Sbjct: 158 KDVTDAIRDVHVKGLMYQWIEQDMEKYILRGDETFAVLSRLVAHGKQLFLITNSPFSFVD 217
Query: 233 KGFK 222
KG +
Sbjct: 218 KGMR 221
>AK023995-1|BAB14763.1| 520|Homo sapiens protein ( Homo sapiens
cDNA FLJ13933 fis, clone Y79AA1000782, weakly similar to
CYTOSOLIC PURINE 5'-NUCLEOTIDASE (EC 3.1.3.5). ).
Length = 520
Score = 31.5 bits (68), Expect = 3.6
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -1
Query: 410 EDVSEAIRHVEMSKQSLQHVEENVQRGITSTDRIFAIVRDLAGSNKTV-KVADVIERCVD 234
+DV++AIR V + Q +E+++++ I D FA++ L K + + + VD
Sbjct: 217 KDVTDAIRDVHVKGLMYQWIEQDMEKYILRGDETFAVLSRLVAHGKQLFLITNSPFSFVD 276
Query: 233 KGFK 222
KG +
Sbjct: 277 KGMR 280
>AK022504-1|BAB14064.1| 486|Homo sapiens protein ( Homo sapiens
cDNA FLJ12442 fis, clone NT2RM1000153, weakly similar to
CYTOSOLIC PURINE 5'-NUCLEOTIDASE (EC 3.1.3.5). ).
Length = 486
Score = 31.5 bits (68), Expect = 3.6
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -1
Query: 410 EDVSEAIRHVEMSKQSLQHVEENVQRGITSTDRIFAIVRDLAGSNKTV-KVADVIERCVD 234
+DV++AIR V + Q +E+++++ I D FA++ L K + + + VD
Sbjct: 183 KDVTDAIRDVHVKGLMYQWIEQDMEKYILRGDETFAVLSRLVAHGKQLFLITNSPFSFVD 242
Query: 233 KGFK 222
KG +
Sbjct: 243 KGMR 246
>AF131781-1|AAD20044.1| 390|Homo sapiens Unknown protein.
Length = 390
Score = 31.5 bits (68), Expect = 3.6
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -1
Query: 410 EDVSEAIRHVEMSKQSLQHVEENVQRGITSTDRIFAIVRDLAGSNKTV-KVADVIERCVD 234
+DV++AIR V + Q +E+++++ I D FA++ L K + + + VD
Sbjct: 87 KDVTDAIRDVHVKGLMYQWIEQDMEKYILRGDETFAVLSRLVAHGKQLFLITNSPFSFVD 146
Query: 233 KGFK 222
KG +
Sbjct: 147 KGMR 150
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,716,390
Number of Sequences: 237096
Number of extensions: 2057331
Number of successful extensions: 6919
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 6445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6894
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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