Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_T7_J15
         (805 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72507-15|CAJ55245.1|  365|Caenorhabditis elegans Hypothetical p...   155   3e-38
Z72507-7|CAD56569.1|  373|Caenorhabditis elegans Hypothetical pr...   155   3e-38
Z72507-6|CAA96631.1|  398|Caenorhabditis elegans Hypothetical pr...   155   3e-38
U08139-1|AAA83388.1|  192|Caenorhabditis elegans ubc-1 protein.        31   0.97 
AF045638-8|AAC02561.2|  192|Caenorhabditis elegans Ubiquitin con...    31   0.97 
Z71259-7|CAA95793.1|  423|Caenorhabditis elegans Hypothetical pr...    30   1.7  
U59210-1|AAB09669.1|  423|Caenorhabditis elegans EAT-5 protein.        30   1.7  
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p...    30   1.7  
U40414-2|AAA81405.2|  634|Caenorhabditis elegans Hypothetical pr...    29   3.9  
U23412-4|AAK21468.3|  697|Caenorhabditis elegans Ubiquitin-like ...    29   3.9  
AB095020-1|BAC22612.1|  697|Caenorhabditis elegans similar to SU...    29   3.9  
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ...    29   5.1  
AF016415-5|AAW88414.1|  305|Caenorhabditis elegans Serpentine re...    29   5.1  
Z66498-2|CAA91291.2|  419|Caenorhabditis elegans Hypothetical pr...    28   9.0  
U40414-1|AAA81404.2|  543|Caenorhabditis elegans Hypothetical pr...    28   9.0  

>Z72507-15|CAJ55245.1|  365|Caenorhabditis elegans Hypothetical
           protein F17C11.9c protein.
          Length = 365

 Score =  155 bits (377), Expect = 3e-38
 Identities = 70/113 (61%), Positives = 81/113 (71%)
 Frame = -2

Query: 669 C*IXIPRXLAKVFMSCNLITGMFQRFDKMRKQAFASVCLFGEDINSTISGVWVWRGKELV 490
           C    P  L   FMSCNLI GM+QR +K++K AFAS+ LFG D NSTISG+WVW+G +L 
Sbjct: 254 CEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLA 313

Query: 489 FPLSSDWQVDYESYDWKKLDPSSEETKKLVQDYFSWNGTDKDGRKFNQGKIFK 331
           F LS DWQVDYESY W KLD  S+ TKK V +Y  W G D  G+KFNQGKIFK
Sbjct: 314 FELSPDWQVDYESYTWTKLDAKSDATKKEVNEYLMWEG-DFGGKKFNQGKIFK 365



 Score = 33.5 bits (73), Expect = 0.18
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -3

Query: 704 EKFDPENYSIWYAEYXYPE 648
           E FD +N+SIW  EY YPE
Sbjct: 242 ENFDADNWSIWKCEYKYPE 260


>Z72507-7|CAD56569.1|  373|Caenorhabditis elegans Hypothetical
           protein F17C11.9b protein.
          Length = 373

 Score =  155 bits (377), Expect = 3e-38
 Identities = 70/113 (61%), Positives = 81/113 (71%)
 Frame = -2

Query: 669 C*IXIPRXLAKVFMSCNLITGMFQRFDKMRKQAFASVCLFGEDINSTISGVWVWRGKELV 490
           C    P  L   FMSCNLI GM+QR +K++K AFAS+ LFG D NSTISG+WVW+G +L 
Sbjct: 262 CEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLA 321

Query: 489 FPLSSDWQVDYESYDWKKLDPSSEETKKLVQDYFSWNGTDKDGRKFNQGKIFK 331
           F LS DWQVDYESY W KLD  S+ TKK V +Y  W G D  G+KFNQGKIFK
Sbjct: 322 FELSPDWQVDYESYTWTKLDAKSDATKKEVNEYLMWEG-DFGGKKFNQGKIFK 373



 Score = 33.5 bits (73), Expect = 0.18
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -3

Query: 704 EKFDPENYSIWYAEYXYPE 648
           E FD +N+SIW  EY YPE
Sbjct: 250 ENFDADNWSIWKCEYKYPE 268


>Z72507-6|CAA96631.1|  398|Caenorhabditis elegans Hypothetical
           protein F17C11.9a protein.
          Length = 398

 Score =  155 bits (377), Expect = 3e-38
 Identities = 70/113 (61%), Positives = 81/113 (71%)
 Frame = -2

Query: 669 C*IXIPRXLAKVFMSCNLITGMFQRFDKMRKQAFASVCLFGEDINSTISGVWVWRGKELV 490
           C    P  L   FMSCNLI GM+QR +K++K AFAS+ LFG D NSTISG+WVW+G +L 
Sbjct: 287 CEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLA 346

Query: 489 FPLSSDWQVDYESYDWKKLDPSSEETKKLVQDYFSWNGTDKDGRKFNQGKIFK 331
           F LS DWQVDYESY W KLD  S+ TKK V +Y  W G D  G+KFNQGKIFK
Sbjct: 347 FELSPDWQVDYESYTWTKLDAKSDATKKEVNEYLMWEG-DFGGKKFNQGKIFK 398



 Score = 33.5 bits (73), Expect = 0.18
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -3

Query: 704 EKFDPENYSIWYAEYXYPE 648
           E FD +N+SIW  EY YPE
Sbjct: 275 ENFDADNWSIWKCEYKYPE 293


>U08139-1|AAA83388.1|  192|Caenorhabditis elegans ubc-1 protein.
          Length = 192

 Score = 31.1 bits (67), Expect = 0.97
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +2

Query: 491 TSSFPRHTHTPEMVELMSSPNRQTDAKACLRILSNLWN 604
           T  +P    T + +  M  PN   D   CL IL N W+
Sbjct: 60  TEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWS 97


>AF045638-8|AAC02561.2|  192|Caenorhabditis elegans Ubiquitin
           conjugating enzyme protein1 protein.
          Length = 192

 Score = 31.1 bits (67), Expect = 0.97
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +2

Query: 491 TSSFPRHTHTPEMVELMSSPNRQTDAKACLRILSNLWN 604
           T  +P    T + +  M  PN   D   CL IL N W+
Sbjct: 60  TEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWS 97


>Z71259-7|CAA95793.1|  423|Caenorhabditis elegans Hypothetical
           protein F13G3.8 protein.
          Length = 423

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +2

Query: 494 SSFPRHTHTPEMVELMSSPNRQTDAKACLRILSNLWN 604
           S F  H  TP+++ L+   N  T    C  I+  +WN
Sbjct: 346 SEFCLHKFTPDIIILLKMINNHTGDIVCTEIVGRMWN 382


>U59210-1|AAB09669.1|  423|Caenorhabditis elegans EAT-5 protein.
          Length = 423

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +2

Query: 494 SSFPRHTHTPEMVELMSSPNRQTDAKACLRILSNLWN 604
           S F  H  TP+++ L+   N  T    C  I+  +WN
Sbjct: 346 SEFCLHKFTPDIIILLKMINNHTGDIVCTEIVGRMWN 382


>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
            protein K07E12.1b protein.
          Length = 12268

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = -2

Query: 486  PLSSDWQVDYESYDWKKL 433
            PL  D QVD+++Y+W+KL
Sbjct: 2672 PLGPDGQVDFQNYEWQKL 2689


>U40414-2|AAA81405.2|  634|Caenorhabditis elegans Hypothetical
           protein F53B3.2 protein.
          Length = 634

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 395 TTSHGTEPTKTVESSTRARYSSECRPTSS 309
           TT+  T PT T E ST A+ S+  +PT++
Sbjct: 218 TTTTSTFPTSTTEKSTTAQPSTTTKPTTT 246


>U23412-4|AAK21468.3|  697|Caenorhabditis elegans Ubiquitin-like
           protease protein 1 protein.
          Length = 697

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -1

Query: 328 NADQRPANVYTFHTITIKNFTKKKHSNVNRW 236
           N D +   +Y F+T    N   K +++V RW
Sbjct: 534 NGDSKYPKIYAFNTFFYSNIVSKGYASVKRW 564


>AB095020-1|BAC22612.1|  697|Caenorhabditis elegans similar to
           SUMO-1-specific protease protein.
          Length = 697

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -1

Query: 328 NADQRPANVYTFHTITIKNFTKKKHSNVNRW 236
           N D +   +Y F+T    N   K +++V RW
Sbjct: 534 NGDSKYPKIYAFNTFFYSNIVSKGYASVKRW 564


>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
           protein Y8A9A.2 protein.
          Length = 1360

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 518 CGCGAERSSCSRCRLIGRWTTSPTTG 441
           C C  + +    CRL+  W+   TTG
Sbjct: 696 CSCNGDTTESENCRLLSSWSEWTTTG 721


>AF016415-5|AAW88414.1|  305|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 30 protein.
          Length = 305

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 83  GTTLNKCKYYHFFMQRRVVF 142
           G  +NKC Y +F +QR +VF
Sbjct: 171 GCAINKCFYNYFMLQRSIVF 190


>Z66498-2|CAA91291.2|  419|Caenorhabditis elegans Hypothetical
           protein M195.2 protein.
          Length = 419

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = -3

Query: 587 KCANRLSHPSACLVKTSIPPSLECGCGAERSSCSRCRLIGRWTTSPTTG 441
           KC+   +  +     + +P +  CGC A  S  + CR   R T S + G
Sbjct: 4   KCSTSTNISNRVCSCSPLPSTSSCGCQASSSCANSCRSTCRPTCSSSGG 52


>U40414-1|AAA81404.2|  543|Caenorhabditis elegans Hypothetical
           protein F53B3.1 protein.
          Length = 543

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 63  EMRYRSRERH*INASIIIFSCNAASFSALHYTAIENH 173
           E+   + ER  ++  II F C    F A  YTA+E H
Sbjct: 454 EVAVMTHER--MHTGIIKFECKVCDFRANRYTAMEEH 488


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,452,648
Number of Sequences: 27780
Number of extensions: 408628
Number of successful extensions: 1341
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1338
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)